RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 NOXA1Q86UR1 476 aa5.3□□□□□ -1.56
CLK1-202ENST00000409403 P2RY8Q86VZ1 359 aa5.3□□□□□ -1.56
CLK1-202ENST00000409403 C10orf107Q8IVU9 208 aa5.3□□□□□ -1.56
CLK1-202ENST00000409403 DDIASQ8IXT1 998 aa5.3□□□□□ -1.56
CLK1-202ENST00000409403 TBC1D21Q8IYX1 336 aa5.3□□□□□ -1.56
CLK1-202ENST00000409403 ADGRF2Q8IZF7 708 aa5.3□□□□□ -1.56
CLK1-202ENST00000409403 ZNF781Q8N8C0 355 aa5.3□□□□□ -1.56
CLK1-202ENST00000409403 ANKRD52Q8NB46 1076 aa5.3□□□□□ -1.56
CLK1-202ENST00000409403 FBXL13Q8NEE6 735 aa5.3□□□□□ -1.56
CLK1-202ENST00000409403 CYP2W1Q8TAV3 490 aa5.3□□□□□ -1.56
CLK1-202ENST00000409403 POC1BQ8TC44 478 aa5.3□□□□□ -1.56
CLK1-202ENST00000409403 SPATA18Q8TC71 538 aa5.3□□□□□ -1.56
CLK1-202ENST00000409403 FKBP10Q96AY3 582 aa5.3□□□□□ -1.56
CLK1-202ENST00000409403 FAF2Q96CS3 445 aa5.3□□□□□ -1.56
CLK1-202ENST00000409403 LRRC46Q96FV0 321 aa5.3□□□□□ -1.56
CLK1-202ENST00000409403 TSNARE1Q96NA8 513 aa5.3□□□□□ -1.56
CLK1-202ENST00000409403 WWC2-AS2Q96NR7 200 aa5.3□□□□□ -1.56
CLK1-202ENST00000409403 ADOQ96SZ5 270 aa5.3□□□□□ -1.56
CLK1-202ENST00000409403 NAT9Q9BTE0 207 aa5.3□□□□□ -1.56
CLK1-202ENST00000409403 BDH2Q9BUT1 245 aa5.3□□□□□ -1.56
CLK1-202ENST00000409403 COA1Q9GZY4 146 aa5.3□□□□□ -1.56
CLK1-202ENST00000409403 POPDC2Q9HBU9 364 aa5.3□□□□□ -1.56
CLK1-202ENST00000409403 WDR6Q9NNW5 1121 aaKnown RBP5.3□□□□□ -1.56
CLK1-202ENST00000409403 XPNPEP3Q9NQH7 507 aa5.3□□□□□ -1.56
CLK1-202ENST00000409403 ABCB10Q9NRK6 738 aa5.3□□□□□ -1.56
CLK1-202ENST00000409403 FARSBQ9NSD9 589 aaKnown RBP5.3□□□□□ -1.56
CLK1-202ENST00000409403 ACOXLQ9NUZ1 547 aa5.3□□□□□ -1.56
CLK1-202ENST00000409403 ASNSD1Q9NWL6 643 aa5.3□□□□□ -1.56
CLK1-202ENST00000409403 CCDC59Q9P031 241 aaKnown RBP5.3□□□□□ -1.56
CLK1-202ENST00000409403 FBXO5Q9UKT4 447 aa5.3□□□□□ -1.56
CLK1-202ENST00000409403 AP3M1Q9Y2T2 418 aa5.3□□□□□ -1.56
CLK1-202ENST00000409403 SLC45A1Q9Y2W3 748 aa5.3□□□□□ -1.56
CLK1-202ENST00000409403 PCDHGB1Q9Y5G3 927 aa5.3□□□□□ -1.56
CLK1-202ENST00000409403 CSNK1G3Q9Y6M4 447 aa5.3□□□□□ -1.56
CLK1-202ENST00000409403 R4GN57 208 aa5.3□□□□□ -1.56
CLK1-202ENST00000409403 ZNFX1Q9P2E3 1918 aaKnown RBP5.29□□□□□ -1.56
CLK1-202ENST00000409403 E7ENX8 843 aa5.29□□□□□ -1.56
CLK1-202ENST00000409403 INO80B-WBP1J3KQ70 363 aa5.29□□□□□ -1.56
CLK1-202ENST00000409403 DCLK1O15075 740 aa5.29□□□□□ -1.56
CLK1-202ENST00000409403 FFAR2O15552 330 aa5.29□□□□□ -1.56
CLK1-202ENST00000409403 TIPRLO75663 272 aa5.29□□□□□ -1.56
CLK1-202ENST00000409403 KCNK2O95069 426 aa5.29□□□□□ -1.56
CLK1-202ENST00000409403 TOP3BO95985 862 aaKnown RBP5.29□□□□□ -1.56
CLK1-202ENST00000409403 LDLRP01130 860 aa5.29□□□□□ -1.56
CLK1-202ENST00000409403 FGBP02675 491 aa5.29□□□□□ -1.56
CLK1-202ENST00000409403 CHRNA1P02708 482 aa5.29□□□□□ -1.56
CLK1-202ENST00000409403 SLC4A1P02730 911 aa5.29□□□□□ -1.56
CLK1-202ENST00000409403 C1QAP02745 245 aa5.29□□□□□ -1.56
CLK1-202ENST00000409403 HMGN1P05114 100 aa5.29□□□□□ -1.56
CLK1-202ENST00000409403 ITGA2P17301 1181 aa5.29□□□□□ -1.56
CLK1-202ENST00000409403 HOXB6P17509 224 aaKnown RBP5.29□□□□□ -1.56
CLK1-202ENST00000409403 CKMT2P17540 419 aa5.29□□□□□ -1.56
CLK1-202ENST00000409403 TYRP1P17643 537 aa5.29□□□□□ -1.56
CLK1-202ENST00000409403 TGM2P21980 687 aa5.29□□□□□ -1.56
CLK1-202ENST00000409403 ACVR2AP27037 513 aa5.29□□□□□ -1.56
CLK1-202ENST00000409403 KRT20P35900 424 aa5.29□□□□□ -1.56
CLK1-202ENST00000409403 UGT2B10P36537 528 aa5.29□□□□□ -1.56
CLK1-202ENST00000409403 GP5P40197 560 aa5.29□□□□□ -1.56
CLK1-202ENST00000409403 SLC26A3P40879 764 aa5.29□□□□□ -1.56
CLK1-202ENST00000409403 QARSP47897 775 aaKnown RBP5.29□□□□□ -1.56
CLK1-202ENST00000409403 NPTX2P47972 431 aa5.29□□□□□ -1.56
CLK1-202ENST00000409403 GCLMP48507 274 aa5.29□□□□□ -1.56
CLK1-202ENST00000409403 RPL14P50914 215 aaKnown RBP5.29□□□□□ -1.56
CLK1-202ENST00000409403 ATP4BP51164 291 aa5.29□□□□□ -1.56
CLK1-202ENST00000409403 NDST1P52848 882 aa5.29□□□□□ -1.56
CLK1-202ENST00000409403 PSMC5P62195 406 aa5.29□□□□□ -1.56
CLK1-202ENST00000409403 PRKCEQ02156 737 aa5.29□□□□□ -1.56
CLK1-202ENST00000409403 FOXM1Q08050 763 aa5.29□□□□□ -1.56
CLK1-202ENST00000409403 SMARCB1Q12824 385 aa5.29□□□□□ -1.56
CLK1-202ENST00000409403 TRAF3Q13114 568 aa5.29□□□□□ -1.56
CLK1-202ENST00000409403 FADDQ13158 208 aa5.29□□□□□ -1.56
CLK1-202ENST00000409403 IL18R1Q13478 541 aa5.29□□□□□ -1.56
CLK1-202ENST00000409403 BMPR2Q13873 1038 aa5.29□□□□□ -1.56
CLK1-202ENST00000409403 ANGPT1Q15389 498 aa5.29□□□□□ -1.56
CLK1-202ENST00000409403 CTF1Q16619 201 aa5.29□□□□□ -1.56
CLK1-202ENST00000409403 SLC9B1Q4ZJI4 515 aa5.29□□□□□ -1.56
CLK1-202ENST00000409403 CYBRD1Q53TN4 286 aa5.29□□□□□ -1.56
CLK1-202ENST00000409403 XAF1Q6GPH4 301 aa5.29□□□□□ -1.56
CLK1-202ENST00000409403 LCN8Q6JVE9 175 aa5.29□□□□□ -1.56
CLK1-202ENST00000409403 DNAJC24Q6P3W2 148 aa5.29□□□□□ -1.56
CLK1-202ENST00000409403 FAM171BQ6P995 826 aa5.29□□□□□ -1.56
CLK1-202ENST00000409403 CYP20A1Q6UW02 462 aa5.29□□□□□ -1.56
CLK1-202ENST00000409403 LAYNQ6UX15 382 aa5.29□□□□□ -1.56
CLK1-202ENST00000409403 CCBE1Q6UXH8 406 aaPredicted RBP5.29□□□□□ -1.56
CLK1-202ENST00000409403 C1orf186Q6ZWK4 172 aa5.29□□□□□ -1.56
CLK1-202ENST00000409403 GLRX5Q86SX6 157 aa5.29□□□□□ -1.56
CLK1-202ENST00000409403 RAB43Q86YS6 212 aa5.29□□□□□ -1.56
CLK1-202ENST00000409403 UBQLNLQ8IYU4 475 aa5.29□□□□□ -1.56
CLK1-202ENST00000409403 TMEM199Q8N511 208 aa5.29□□□□□ -1.56
CLK1-202ENST00000409403 AMER2Q8N7J2 671 aa5.29□□□□□ -1.56
CLK1-202ENST00000409403 ZNF555Q8NEP9 628 aa5.29□□□□□ -1.56
CLK1-202ENST00000409403 TRPV3Q8NET8 790 aa5.29□□□□□ -1.56
CLK1-202ENST00000409403 MCFD2Q8NI22 146 aa5.29□□□□□ -1.56
CLK1-202ENST00000409403 ACTL9Q8TC94 416 aa5.29□□□□□ -1.56
CLK1-202ENST00000409403 ZFAND1Q8TCF1 268 aa5.29□□□□□ -1.56
CLK1-202ENST00000409403 DYNC2LI1Q8TCX1 351 aa5.29□□□□□ -1.56
CLK1-202ENST00000409403 RORBQ92753 470 aa5.29□□□□□ -1.56
CLK1-202ENST00000409403 POP5Q969H6 163 aaKnown RBP5.29□□□□□ -1.56
CLK1-202ENST00000409403 SLCO4A1Q96BD0 722 aa5.29□□□□□ -1.56
CLK1-202ENST00000409403 NSUN4Q96CB9 384 aaKnown RBP5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms