RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 SPNS1Q9H2V7 528 aa17.05■□□□□ 0.32
PDLIM2-206ENST00000409141 ZNF71Q9NQZ8 489 aaPredicted RBP17.05■□□□□ 0.32
PDLIM2-206ENST00000409141 NUDT4Q9NZJ9 180 aa17.05■□□□□ 0.32
PDLIM2-206ENST00000409141 CFAP46Q8IYW2 2715 aa17.04■□□□□ 0.32
PDLIM2-206ENST00000409141 COL6A6A6NMZ7 2263 aa17.04■□□□□ 0.32
PDLIM2-206ENST00000409141 EXOC1LA0A1B0GW35 172 aa17.04■□□□□ 0.32
PDLIM2-206ENST00000409141 FFAR3O14843 346 aa17.04■□□□□ 0.32
PDLIM2-206ENST00000409141 GPR42O15529 346 aa17.04■□□□□ 0.32
PDLIM2-206ENST00000409141 NDUFS4O43181 175 aa17.04■□□□□ 0.32
PDLIM2-206ENST00000409141 RIPK2O43353 540 aa17.04■□□□□ 0.32
PDLIM2-206ENST00000409141 KERAO60938 352 aa17.04■□□□□ 0.32
PDLIM2-206ENST00000409141 KLHL2O95198 593 aa17.04■□□□□ 0.32
PDLIM2-206ENST00000409141 ABHD2P08910 425 aa17.04■□□□□ 0.32
PDLIM2-206ENST00000409141 ZGLP1P0C6A0 271 aa17.04■□□□□ 0.32
PDLIM2-206ENST00000409141 C1GALT1C1LP0DN25 315 aa17.04■□□□□ 0.32
PDLIM2-206ENST00000409141 MMP11P24347 488 aa17.04■□□□□ 0.32
PDLIM2-206ENST00000409141 VARSP26640 1264 aaKnown RBP17.04■□□□□ 0.32
PDLIM2-206ENST00000409141 SCTRP47872 440 aa17.04■□□□□ 0.32
PDLIM2-206ENST00000409141 GLRBP48167 497 aa17.04■□□□□ 0.32
PDLIM2-206ENST00000409141 SNRPNP63162 240 aaKnown RBP17.04■□□□□ 0.32
PDLIM2-206ENST00000409141 REEP5Q00765 189 aa17.04■□□□□ 0.32
PDLIM2-206ENST00000409141 KLC1Q07866 573 aa17.04■□□□□ 0.32
PDLIM2-206ENST00000409141 CDC16Q13042 620 aa17.04■□□□□ 0.32
PDLIM2-206ENST00000409141 PWP1Q13610 501 aa17.04■□□□□ 0.32
PDLIM2-206ENST00000409141 VWA2Q5GFL6 755 aa17.04■□□□□ 0.32
PDLIM2-206ENST00000409141 TMEM214Q6NUQ4 689 aaKnown RBP17.04■□□□□ 0.32
PDLIM2-206ENST00000409141 KLC3Q6P597 504 aa17.04■□□□□ 0.32
PDLIM2-206ENST00000409141 SLCO4C1Q6ZQN7 724 aa17.04■□□□□ 0.32
PDLIM2-206ENST00000409141 PPP1R32Q7Z5V6 425 aa17.04■□□□□ 0.32
PDLIM2-206ENST00000409141 AMER3Q8N944 861 aa17.04■□□□□ 0.32
PDLIM2-206ENST00000409141 SNX31Q8N9S9 440 aa17.04■□□□□ 0.32
PDLIM2-206ENST00000409141 ZCCHC10Q8TBK6 192 aa17.04■□□□□ 0.32
PDLIM2-206ENST00000409141 DCAKDQ8WVC6 231 aa17.04■□□□□ 0.32
PDLIM2-206ENST00000409141 NACC2Q96BF6 587 aa17.04■□□□□ 0.32
PDLIM2-206ENST00000409141 MOCOSQ96EN8 888 aa17.04■□□□□ 0.32
PDLIM2-206ENST00000409141 ATOH8Q96SQ7 321 aa17.04■□□□□ 0.32
PDLIM2-206ENST00000409141 ANKHQ9HCJ1 492 aa17.04■□□□□ 0.32
PDLIM2-206ENST00000409141 P4HTMQ9NXG6 502 aa17.04■□□□□ 0.32
PDLIM2-206ENST00000409141 GPRC5BQ9NZH0 403 aa17.04■□□□□ 0.32
PDLIM2-206ENST00000409141 ZFP69BQ9UJL9 534 aa17.04■□□□□ 0.32
PDLIM2-206ENST00000409141 ZNF180Q9UJW8 692 aa17.04■□□□□ 0.32
PDLIM2-206ENST00000409141 MAP4K5Q9Y4K4 846 aa17.04■□□□□ 0.32
PDLIM2-206ENST00000409141 IGLV3-12A0A075B6K2 115 aa17.03■□□□□ 0.32
PDLIM2-206ENST00000409141 SYCE1LA8MT33 242 aa17.03■□□□□ 0.32
PDLIM2-206ENST00000409141 UBXN8O00124 270 aa17.03■□□□□ 0.32
PDLIM2-206ENST00000409141 CLGNO14967 610 aa17.03■□□□□ 0.32
PDLIM2-206ENST00000409141 CCNT2O60583 730 aaKnown RBP17.03■□□□□ 0.32
PDLIM2-206ENST00000409141 IGHEP01854 428 aa17.03■□□□□ 0.32
PDLIM2-206ENST00000409141 IL1RNP18510 177 aa17.03■□□□□ 0.32
PDLIM2-206ENST00000409141 CXCR2P25025 360 aa17.03■□□□□ 0.32
PDLIM2-206ENST00000409141 CNTFP26441 200 aa17.03■□□□□ 0.32
PDLIM2-206ENST00000409141 AHRP35869 848 aa17.03■□□□□ 0.32
PDLIM2-206ENST00000409141 ACAP2Q15057 778 aa17.03■□□□□ 0.32
PDLIM2-206ENST00000409141 LGSNQ5TDP6 509 aa17.03■□□□□ 0.32
PDLIM2-206ENST00000409141 GSPT2Q8IYD1 628 aaKnown RBP17.03■□□□□ 0.32
PDLIM2-206ENST00000409141 EIF1ADQ8N9N8 165 aaKnown RBP17.03■□□□□ 0.32
PDLIM2-206ENST00000409141 RHEBL1Q8TAI7 183 aa17.03■□□□□ 0.32
PDLIM2-206ENST00000409141 FER1L6-AS2Q96M78 137 aa17.03■□□□□ 0.32
PDLIM2-206ENST00000409141 CRB3Q9BUF7 120 aa17.03■□□□□ 0.32
PDLIM2-206ENST00000409141 CD244Q9BZW8 370 aa17.03■□□□□ 0.32
PDLIM2-206ENST00000409141 MKKSQ9NPJ1 570 aaPredicted RBP17.03■□□□□ 0.32
PDLIM2-206ENST00000409141 SEMA3GQ9NS98 782 aa17.03■□□□□ 0.32
PDLIM2-206ENST00000409141 CCDC189A1A4V9 331 aa17.02■□□□□ 0.32
PDLIM2-206ENST00000409141 B8ZZF3 427 aa17.02■□□□□ 0.32
PDLIM2-206ENST00000409141 TRIM49D1C9J1S8 452 aa17.02■□□□□ 0.32
PDLIM2-206ENST00000409141 H0YIG0 161 aa17.02■□□□□ 0.32
PDLIM2-206ENST00000409141 ZNF500O60304 480 aaPredicted RBP17.02■□□□□ 0.32
PDLIM2-206ENST00000409141 NSA2O95478 260 aaKnown RBP17.02■□□□□ 0.32
PDLIM2-206ENST00000409141 MAT1AQ00266 395 aaKnown RBP17.02■□□□□ 0.32
PDLIM2-206ENST00000409141 RGS1Q08116 209 aa17.02■□□□□ 0.32
PDLIM2-206ENST00000409141 RBBP7Q16576 425 aa17.02■□□□□ 0.32
PDLIM2-206ENST00000409141 PDK4Q16654 411 aa17.02■□□□□ 0.32
PDLIM2-206ENST00000409141 SYT16Q17RD7 645 aa17.02■□□□□ 0.32
PDLIM2-206ENST00000409141 ATG9BQ674R7 924 aa17.02■□□□□ 0.32
PDLIM2-206ENST00000409141 PRSS41Q7RTY9 318 aa17.02■□□□□ 0.32
PDLIM2-206ENST00000409141 ANKRD53Q8N9V6 530 aa17.02■□□□□ 0.32
PDLIM2-206ENST00000409141 TRPV3Q8NET8 790 aa17.02■□□□□ 0.32
PDLIM2-206ENST00000409141 TXLNGYQ9BZA5 131 aa17.02■□□□□ 0.32
PDLIM2-206ENST00000409141 C14orf105Q9NVL8 296 aa17.02■□□□□ 0.32
PDLIM2-206ENST00000409141 C3orf18Q9UK00 162 aa17.02■□□□□ 0.32
PDLIM2-206ENST00000409141 TP53TG5Q9Y2B4 290 aa17.02■□□□□ 0.32
PDLIM2-206ENST00000409141 SLC22A7Q9Y694 548 aa17.02■□□□□ 0.32
PDLIM2-206ENST00000409141 A6NL46 340 aa17.01■□□□□ 0.31
PDLIM2-206ENST00000409141 SGK494L7N484 410 aa17.01■□□□□ 0.31
PDLIM2-206ENST00000409141 AGPSO00116 658 aa17.01■□□□□ 0.31
PDLIM2-206ENST00000409141 MAP2K7O14733 419 aa17.01■□□□□ 0.31
PDLIM2-206ENST00000409141 SNRPAP09012 282 aaKnown RBP17.01■□□□□ 0.31
PDLIM2-206ENST00000409141 MYBL2P10244 700 aa17.01■□□□□ 0.31
PDLIM2-206ENST00000409141 SLBPQ14493 270 aaKnown RBP eCLIP17.01■□□□□ 0.31
PDLIM2-206ENST00000409141 SLC29A2Q14542 456 aa17.01■□□□□ 0.31
PDLIM2-206ENST00000409141 LACTB2Q53H82 288 aaPredicted RBP17.01■□□□□ 0.31
PDLIM2-206ENST00000409141 DCAF10Q5QP82 559 aa17.01■□□□□ 0.31
PDLIM2-206ENST00000409141 TCTN3Q6NUS6 607 aa17.01■□□□□ 0.31
PDLIM2-206ENST00000409141 LAPTM4BQ86VI4 370 aa17.01■□□□□ 0.31
PDLIM2-206ENST00000409141 KRT78Q8N1N4 520 aa17.01■□□□□ 0.31
PDLIM2-206ENST00000409141 CLEC1AQ8NC01 280 aa17.01■□□□□ 0.31
PDLIM2-206ENST00000409141 NT5CQ8TCD5 201 aa17.01■□□□□ 0.31
PDLIM2-206ENST00000409141 ISL2Q96A47 359 aa17.01■□□□□ 0.31
PDLIM2-206ENST00000409141 GPR78Q96P69 363 aa17.01■□□□□ 0.31
PDLIM2-206ENST00000409141 SLC25A23Q9BV35 468 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms