RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 MRPS2Q9Y399 296 aaKnown RBP8.61□□□□□ -1.03
SNORD88A-201ENST00000408314 PCDHGA10Q9Y5H3 936 aa8.61□□□□□ -1.03
SNORD88A-201ENST00000408314 MDC1Q14676 2089 aaKnown RBP8.61□□□□□ -1.03
SNORD88A-201ENST00000408314 CCDC88CQ9P219 2028 aa8.6□□□□□ -1.03
SNORD88A-201ENST00000408314 TRAV17A0A0B4J275 112 aa8.6□□□□□ -1.03
SNORD88A-201ENST00000408314 SYNDIG1LA6NDD5 238 aa8.6□□□□□ -1.03
SNORD88A-201ENST00000408314 CDK2AP1O14519 115 aa8.6□□□□□ -1.03
SNORD88A-201ENST00000408314 OR1F1O43749 312 aa8.6□□□□□ -1.03
SNORD88A-201ENST00000408314 H2AFYO75367 372 aaKnown RBP8.6□□□□□ -1.03
SNORD88A-201ENST00000408314 MED26O95402 600 aa8.6□□□□□ -1.03
SNORD88A-201ENST00000408314 GUCA1CO95843 209 aa8.6□□□□□ -1.03
SNORD88A-201ENST00000408314 S100BP04271 92 aaPredicted RBP8.6□□□□□ -1.03
SNORD88A-201ENST00000408314 PRR35P0CG20 571 aa8.6□□□□□ -1.03
SNORD88A-201ENST00000408314 NPPBP16860 134 aa8.6□□□□□ -1.03
SNORD88A-201ENST00000408314 IL1RNP18510 177 aa8.6□□□□□ -1.03
SNORD88A-201ENST00000408314 GNAZP19086 355 aa8.6□□□□□ -1.03
SNORD88A-201ENST00000408314 SAT1P21673 171 aa8.6□□□□□ -1.03
SNORD88A-201ENST00000408314 STX2P32856 288 aa8.6□□□□□ -1.03
SNORD88A-201ENST00000408314 GP5P40197 560 aa8.6□□□□□ -1.03
SNORD88A-201ENST00000408314 GLRBP48167 497 aa8.6□□□□□ -1.03
SNORD88A-201ENST00000408314 FOXL2P58012 376 aa8.6□□□□□ -1.03
SNORD88A-201ENST00000408314 ATP6V0D1P61421 351 aa8.6□□□□□ -1.03
SNORD88A-201ENST00000408314 ETF1P62495 437 aaKnown RBP8.6□□□□□ -1.03
SNORD88A-201ENST00000408314 TIAL1Q01085 375 aaKnown RBP eCLIP8.6□□□□□ -1.03
SNORD88A-201ENST00000408314 CDC16Q13042 620 aa8.6□□□□□ -1.03
SNORD88A-201ENST00000408314 NAB1Q13506 487 aa8.6□□□□□ -1.03
SNORD88A-201ENST00000408314 EXT1Q16394 746 aa8.6□□□□□ -1.03
SNORD88A-201ENST00000408314 ABHD17BQ5VST6 288 aa8.6□□□□□ -1.03
SNORD88A-201ENST00000408314 RPUSD3Q6P087 351 aaKnown RBP8.6□□□□□ -1.03
SNORD88A-201ENST00000408314 TMEM205Q6UW68 189 aa8.6□□□□□ -1.03
SNORD88A-201ENST00000408314 FAM180AQ6UWF9 173 aa8.6□□□□□ -1.03
SNORD88A-201ENST00000408314 SBSNQ6UWP8 590 aa8.6□□□□□ -1.03
SNORD88A-201ENST00000408314 MBOAT1Q6ZNC8 495 aa8.6□□□□□ -1.03
SNORD88A-201ENST00000408314 CYS1Q717R9 158 aa8.6□□□□□ -1.03
SNORD88A-201ENST00000408314 KRT78Q8N1N4 520 aa8.6□□□□□ -1.03
SNORD88A-201ENST00000408314 ARHGEF39Q8N4T4 335 aa8.6□□□□□ -1.03
SNORD88A-201ENST00000408314 SPATA4Q8NEY3 305 aa8.6□□□□□ -1.03
SNORD88A-201ENST00000408314 OR4K1Q8NGD4 311 aa8.6□□□□□ -1.03
SNORD88A-201ENST00000408314 OR9A4Q8NGU2 314 aa8.6□□□□□ -1.03
SNORD88A-201ENST00000408314 OR51Q1Q8NH59 317 aa8.6□□□□□ -1.03
SNORD88A-201ENST00000408314 ZCCHC10Q8TBK6 192 aa8.6□□□□□ -1.03
SNORD88A-201ENST00000408314 SSC4DQ8WTU2 575 aa8.6□□□□□ -1.03
SNORD88A-201ENST00000408314 C8orf44Q96CB5 159 aa8.6□□□□□ -1.03
SNORD88A-201ENST00000408314 SNRNP40Q96DI7 357 aaKnown RBP8.6□□□□□ -1.03
SNORD88A-201ENST00000408314 TM4SF19Q96DZ7 209 aa8.6□□□□□ -1.03
SNORD88A-201ENST00000408314 OLFM1Q99784 485 aa8.6□□□□□ -1.03
SNORD88A-201ENST00000408314 CPNE1Q99829 537 aa8.6□□□□□ -1.03
SNORD88A-201ENST00000408314 PITHD1Q9GZP4 211 aaPredicted RBP8.6□□□□□ -1.03
SNORD88A-201ENST00000408314 RNF32Q9H0A6 362 aa8.6□□□□□ -1.03
SNORD88A-201ENST00000408314 SAYSD1Q9NPB0 183 aa8.6□□□□□ -1.03
SNORD88A-201ENST00000408314 SLC17A6Q9P2U8 582 aa8.6□□□□□ -1.03
SNORD88A-201ENST00000408314 ZFP69BQ9UJL9 534 aa8.6□□□□□ -1.03
SNORD88A-201ENST00000408314 PYCARDQ9ULZ3 195 aa8.6□□□□□ -1.03
SNORD88A-201ENST00000408314 OARD1Q9Y530 152 aa8.6□□□□□ -1.03
SNORD88A-201ENST00000408314 DOPEY2Q9Y3R5 2298 aa8.6□□□□□ -1.03
SNORD88A-201ENST00000408314 PCSK5Q92824 1860 aa8.6□□□□□ -1.03
SNORD88A-201ENST00000408314 PRRC2CQ9Y520 2896 aaKnown RBP8.59□□□□□ -1.03
SNORD88A-201ENST00000408314 ESPL1Q14674 2120 aa8.59□□□□□ -1.03
SNORD88A-201ENST00000408314 NPEPPSL1A6NEC2 478 aa8.59□□□□□ -1.03
SNORD88A-201ENST00000408314 ANKUB1A6NFN9 424 aa8.59□□□□□ -1.03
SNORD88A-201ENST00000408314 TCP11X1B4DZS4 312 aa8.59□□□□□ -1.03
SNORD88A-201ENST00000408314 PSMD12O00232 456 aaPredicted RBP8.59□□□□□ -1.03
SNORD88A-201ENST00000408314 KLHL18O94889 574 aa8.59□□□□□ -1.03
SNORD88A-201ENST00000408314 SERPIND1P05546 499 aa8.59□□□□□ -1.03
SNORD88A-201ENST00000408314 GP1BBP13224 206 aa8.59□□□□□ -1.03
SNORD88A-201ENST00000408314 STMN1P16949 149 aa8.59□□□□□ -1.03
SNORD88A-201ENST00000408314 ALOX12P18054 663 aa8.59□□□□□ -1.03
SNORD88A-201ENST00000408314 SPRP35270 261 aaPredicted RBP8.59□□□□□ -1.03
SNORD88A-201ENST00000408314 UQCRFS1P47985 274 aa8.59□□□□□ -1.03
SNORD88A-201ENST00000408314 PER3P56645 1201 aa8.59□□□□□ -1.03
SNORD88A-201ENST00000408314 TAS2R50P59544 299 aa8.59□□□□□ -1.03
SNORD88A-201ENST00000408314 STXBP1P61764 594 aaKnown RBP8.59□□□□□ -1.03
SNORD88A-201ENST00000408314 REEP5Q00765 189 aa8.59□□□□□ -1.03
SNORD88A-201ENST00000408314 NR6A1Q15406 480 aa8.59□□□□□ -1.03
SNORD88A-201ENST00000408314 PPP1R3AQ16821 1122 aa8.59□□□□□ -1.03
SNORD88A-201ENST00000408314 CDKL4Q5MAI5 379 aa8.59□□□□□ -1.03
SNORD88A-201ENST00000408314 PLAG1Q6DJT9 500 aa8.59□□□□□ -1.03
SNORD88A-201ENST00000408314 FAAH2Q6GMR7 532 aa8.59□□□□□ -1.03
SNORD88A-201ENST00000408314 LINC00696Q6ZRV3 163 aa8.59□□□□□ -1.03
SNORD88A-201ENST00000408314 CPEB2Q7Z5Q1 589 aaKnown RBP8.59□□□□□ -1.03
SNORD88A-201ENST00000408314 CCDC91Q7Z6B0 441 aa8.59□□□□□ -1.03
SNORD88A-201ENST00000408314 TMPRSS11BQ86T26 416 aa8.59□□□□□ -1.03
SNORD88A-201ENST00000408314 CUZD1Q86UP6 607 aa8.59□□□□□ -1.03
SNORD88A-201ENST00000408314 THOC6Q86W42 341 aaKnown RBP8.59□□□□□ -1.03
SNORD88A-201ENST00000408314 DTWD1Q8N5C7 304 aa8.59□□□□□ -1.03
SNORD88A-201ENST00000408314 CISD2Q8N5K1 135 aaKnown RBP8.59□□□□□ -1.03
SNORD88A-201ENST00000408314 BCORP1Q8N888 145 aa8.59□□□□□ -1.03
SNORD88A-201ENST00000408314 ST6GALNAC3Q8NDV1 305 aa8.59□□□□□ -1.03
SNORD88A-201ENST00000408314 ARMC2Q8NEN0 867 aa8.59□□□□□ -1.03
SNORD88A-201ENST00000408314 NT5CQ8TCD5 201 aa8.59□□□□□ -1.03
SNORD88A-201ENST00000408314 BRIX1Q8TDN6 353 aaKnown RBP8.59□□□□□ -1.03
SNORD88A-201ENST00000408314 ADAMTS18Q8TE60 1221 aa8.59□□□□□ -1.03
SNORD88A-201ENST00000408314 PYCR2Q96C36 320 aa8.59□□□□□ -1.03
SNORD88A-201ENST00000408314 PWWP2AQ96N64 755 aa8.59□□□□□ -1.03
SNORD88A-201ENST00000408314 LPAR4Q99677 370 aa8.59□□□□□ -1.03
SNORD88A-201ENST00000408314 WDR83Q9BRX9 315 aaKnown RBP8.59□□□□□ -1.03
SNORD88A-201ENST00000408314 VN1R1Q9GZP7 353 aa8.59□□□□□ -1.03
SNORD88A-201ENST00000408314 DERL2Q9GZP9 239 aa8.59□□□□□ -1.03
SNORD88A-201ENST00000408314 DPH5Q9H2P9 285 aa8.59□□□□□ -1.03
SNORD88A-201ENST00000408314 PLAC1Q9HBJ0 212 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms