RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 NPRL3Q12980 569 aa9.49□□□□□ -0.89
MSH2-202ENST00000406134 RGNQ15493 299 aa9.49□□□□□ -0.89
MSH2-202ENST00000406134 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.49□□□□□ -0.894e-7■■■■■ 35.4
MSH2-202ENST00000406134 KIAA1614Q5VZ46 1190 aa9.49□□□□□ -0.89
MSH2-202ENST00000406134 NIPAL1Q6NVV3 410 aa9.49□□□□□ -0.89
MSH2-202ENST00000406134 OTOP2Q7RTS6 562 aa9.49□□□□□ -0.89
MSH2-202ENST00000406134 ANKRD33Q7Z3H0 272 aa9.49□□□□□ -0.89
MSH2-202ENST00000406134 TECPR1Q7Z6L1 1165 aa9.49□□□□□ -0.89
MSH2-202ENST00000406134 TSPYL5Q86VY4 417 aaPredicted RBP9.49□□□□□ -0.89
MSH2-202ENST00000406134 NAGSQ8N159 534 aa9.49□□□□□ -0.89
MSH2-202ENST00000406134 OR6Q1Q8NGQ2 317 aa9.49□□□□□ -0.89
MSH2-202ENST00000406134 MIPOL1Q8TD10 442 aa9.49□□□□□ -0.89
MSH2-202ENST00000406134 MTG2Q9H4K7 406 aa9.49□□□□□ -0.89
MSH2-202ENST00000406134 TPT1P8Q9HAU6 139 aa9.49□□□□□ -0.89
MSH2-202ENST00000406134 PCDH12Q9NPG4 1184 aa9.49□□□□□ -0.89
MSH2-202ENST00000406134 VCANP13611 3396 aa9.48□□□□□ -0.89
MSH2-202ENST00000406134 KRBA1A5PL33 1030 aa9.48□□□□□ -0.89
MSH2-202ENST00000406134 OR2AG2A6NM03 316 aa9.48□□□□□ -0.89
MSH2-202ENST00000406134 TSPAN6O43657 245 aa9.48□□□□□ -0.89
MSH2-202ENST00000406134 FADS2O95864 444 aaKnown RBP9.48□□□□□ -0.89
MSH2-202ENST00000406134 METAP1P53582 386 aa9.48□□□□□ -0.89
MSH2-202ENST00000406134 CAMK2GQ13555 558 aaPredicted RBP9.48□□□□□ -0.89
MSH2-202ENST00000406134 PROX2Q3B8N5 592 aa9.48□□□□□ -0.89
MSH2-202ENST00000406134 Q6ZVL8 140 aa9.48□□□□□ -0.89
MSH2-202ENST00000406134 PRSS48Q7RTY5 328 aa9.48□□□□□ -0.89
MSH2-202ENST00000406134 SYT12Q8IV01 421 aa9.48□□□□□ -0.89
MSH2-202ENST00000406134 KIAA1958Q8N8K9 716 aa9.48□□□□□ -0.89
MSH2-202ENST00000406134 GOT1L1Q8NHS2 421 aaPredicted RBP9.48□□□□□ -0.89
MSH2-202ENST00000406134 PKP4Q99569 1192 aa9.48□□□□□ -0.89
MSH2-202ENST00000406134 CEP44Q9C0F1 390 aa9.48□□□□□ -0.89
MSH2-202ENST00000406134 ZBP1Q9H171 429 aa9.48□□□□□ -0.89
MSH2-202ENST00000406134 ZNF226Q9NYT6 803 aa9.48□□□□□ -0.89
MSH2-202ENST00000406134 BTNL2Q9UIR0 455 aa9.48□□□□□ -0.89
MSH2-202ENST00000406134 PCDHGA2Q9Y5H1 932 aa9.48□□□□□ -0.89
MSH2-202ENST00000406134 PCYT1BQ9Y5K3 369 aaPredicted RBP9.48□□□□□ -0.89
MSH2-202ENST00000406134 RANBP2P49792 3224 aaKnown RBP9.48□□□□□ -0.89
MSH2-202ENST00000406134 SLC16A8O95907 504 aa9.48□□□□□ -0.89
MSH2-202ENST00000406134 VIPP01282 170 aa9.48□□□□□ -0.89
MSH2-202ENST00000406134 CA8P35219 290 aa9.48□□□□□ -0.89
MSH2-202ENST00000406134 PCGF2P35227 344 aa9.48□□□□□ -0.89
MSH2-202ENST00000406134 HALP42357 657 aa9.48□□□□□ -0.89
MSH2-202ENST00000406134 RXRGP48443 463 aa9.48□□□□□ -0.89
MSH2-202ENST00000406134 RAB15P59190 212 aa9.48□□□□□ -0.89
MSH2-202ENST00000406134 LSM3P62310 102 aaKnown RBP9.48□□□□□ -0.89
MSH2-202ENST00000406134 SRSF11Q05519 484 aaKnown RBP9.48□□□□□ -0.89
MSH2-202ENST00000406134 ITGADQ13349 1161 aa9.48□□□□□ -0.89
MSH2-202ENST00000406134 GTF2H3Q13889 308 aa9.48□□□□□ -0.89
MSH2-202ENST00000406134 ZNF605Q86T29 641 aa9.48□□□□□ -0.89
MSH2-202ENST00000406134 SLCO6A1Q86UG4 719 aa9.48□□□□□ -0.89
MSH2-202ENST00000406134 HUS1BQ8NHY5 278 aa9.48□□□□□ -0.89
MSH2-202ENST00000406134 PHF10Q8WUB8 498 aaKnown RBP9.48□□□□□ -0.89
MSH2-202ENST00000406134 APOBEC4Q8WW27 367 aaKnown RBP9.48□□□□□ -0.89
MSH2-202ENST00000406134 SORCS1Q8WY21 1168 aa9.48□□□□□ -0.89
MSH2-202ENST00000406134 TCEAL4Q96EI5 215 aa9.48□□□□□ -0.89
MSH2-202ENST00000406134 BRF2Q9HAW0 419 aa9.48□□□□□ -0.89
MSH2-202ENST00000406134 NFKBIL1Q9UBC1 381 aaPredicted RBP9.48□□□□□ -0.89
MSH2-202ENST00000406134 FZD4Q9ULV1 537 aa9.48□□□□□ -0.89
MSH2-202ENST00000406134 TMEM221A6NGB7 291 aa9.48□□□□□ -0.89
MSH2-202ENST00000406134 BNIP3LO60238 219 aa9.48□□□□□ -0.89
MSH2-202ENST00000406134 SEMA7AO75326 666 aa9.48□□□□□ -0.89
MSH2-202ENST00000406134 CKMP06732 381 aa9.48□□□□□ -0.89
MSH2-202ENST00000406134 TIMP2P16035 220 aa9.48□□□□□ -0.89
MSH2-202ENST00000406134 FADDQ13158 208 aa9.48□□□□□ -0.89
MSH2-202ENST00000406134 INAVAQ3KP66 663 aa9.48□□□□□ -0.89
MSH2-202ENST00000406134 EGFLAMQ63HQ2 1017 aa9.48□□□□□ -0.89
MSH2-202ENST00000406134 C1orf52Q8N6N3 182 aaKnown RBP9.48□□□□□ -0.89
MSH2-202ENST00000406134 OR7G3Q8NG95 312 aa9.48□□□□□ -0.89
MSH2-202ENST00000406134 NEIL2Q969S2 332 aa9.48□□□□□ -0.89
MSH2-202ENST00000406134 NIPSNAP1Q9BPW8 284 aa9.48□□□□□ -0.89
MSH2-202ENST00000406134 PAK6Q9NQU5 681 aaPredicted RBP9.48□□□□□ -0.89
MSH2-202ENST00000406134 SH3GLB1Q9Y371 365 aa9.48□□□□□ -0.89
MSH2-202ENST00000406134 GMPPBQ9Y5P6 360 aa9.48□□□□□ -0.89
MSH2-202ENST00000406134 MYO15AQ9UKN7 3530 aa9.48□□□□□ -0.89
MSH2-202ENST00000406134 CLDN25C9JDP6 229 aa9.47□□□□□ -0.89
MSH2-202ENST00000406134 DSCR3O14972 297 aa9.47□□□□□ -0.89
MSH2-202ENST00000406134 SLC22A1O15245 554 aa9.47□□□□□ -0.89
MSH2-202ENST00000406134 COX7A2P14406 83 aa9.47□□□□□ -0.89
MSH2-202ENST00000406134 HOXB6P17509 224 aaKnown RBP9.47□□□□□ -0.89
MSH2-202ENST00000406134 MAPK1P28482 360 aa9.47□□□□□ -0.89
MSH2-202ENST00000406134 C21orf33P30042 268 aaPredicted RBP9.47□□□□□ -0.89
MSH2-202ENST00000406134 CASP9P55211 416 aa9.47□□□□□ -0.89
MSH2-202ENST00000406134 HBA1P69905 142 aa9.47□□□□□ -0.89
MSH2-202ENST00000406134 ABRQ12979 859 aa9.47□□□□□ -0.89
MSH2-202ENST00000406134 PDE7AQ13946 482 aa9.47□□□□□ -0.89
MSH2-202ENST00000406134 TAF12Q16514 161 aa9.47□□□□□ -0.89
MSH2-202ENST00000406134 HIST2H2ACQ16777 129 aaPredicted RBP9.47□□□□□ -0.89
MSH2-202ENST00000406134 MLIPQ5VWP3 458 aa9.47□□□□□ -0.89
MSH2-202ENST00000406134 C16orf87Q6PH81 154 aa9.47□□□□□ -0.89
MSH2-202ENST00000406134 AGTRAPQ6RW13 159 aa9.47□□□□□ -0.89
MSH2-202ENST00000406134 GDPD4Q6W3E5 623 aa9.47□□□□□ -0.89
MSH2-202ENST00000406134 SLCO4C1Q6ZQN7 724 aa9.47□□□□□ -0.89
MSH2-202ENST00000406134 LINC00299Q6ZSB3 139 aa9.47□□□□□ -0.89
MSH2-202ENST00000406134 ZNF621Q6ZSS3 439 aa9.47□□□□□ -0.89
MSH2-202ENST00000406134 VN1R5Q7Z5H4 357 aa9.47□□□□□ -0.89
MSH2-202ENST00000406134 METTL3Q86U44 580 aaKnown RBP9.47□□□□□ -0.89
MSH2-202ENST00000406134 MMP21Q8N119 569 aa9.47□□□□□ -0.89
MSH2-202ENST00000406134 ELMO1Q92556 727 aa9.47□□□□□ -0.89
MSH2-202ENST00000406134 TAMM41Q96BW9 452 aa9.47□□□□□ -0.89
MSH2-202ENST00000406134 NRTNQ99748 197 aa9.47□□□□□ -0.89
MSH2-202ENST00000406134 DUSP26Q9BV47 211 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms