RNA–Protein interactions for RNA: ENST00000398661.6

HMGCLL1-205, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 2,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-205ENST00000398661 NDRG4Q9ULP0 352 aaKnown RBP9.81□□□□□ -0.84
HMGCLL1-205ENST00000398661 NEUROG3Q9Y4Z2 214 aa9.81□□□□□ -0.84
HMGCLL1-205ENST00000398661 SNX8Q9Y5X2 465 aa9.81□□□□□ -0.84
HMGCLL1-205ENST00000398661 ATP6V1G2-DDX39BF2Z307 99 aa9.8□□□□□ -0.84
HMGCLL1-205ENST00000398661 STX7O15400 261 aaKnown RBP9.8□□□□□ -0.84
HMGCLL1-205ENST00000398661 DFNA5O60443 496 aa9.8□□□□□ -0.84
HMGCLL1-205ENST00000398661 MOSPD3O75425 235 aa9.8□□□□□ -0.84
HMGCLL1-205ENST00000398661 CCNYL3P0C7X3 344 aa9.8□□□□□ -0.84
HMGCLL1-205ENST00000398661 ADORA3P0DMS8 318 aa9.8□□□□□ -0.84
HMGCLL1-205ENST00000398661 CD1DP15813 335 aa9.8□□□□□ -0.84
HMGCLL1-205ENST00000398661 ZNF30P17039 623 aa9.8□□□□□ -0.84
HMGCLL1-205ENST00000398661 MYL9P24844 172 aa9.8□□□□□ -0.84
HMGCLL1-205ENST00000398661 ELP6Q0PNE2 266 aa9.8□□□□□ -0.84
HMGCLL1-205ENST00000398661 MESP2Q0VG99 397 aa9.8□□□□□ -0.84
HMGCLL1-205ENST00000398661 HYAL2Q12891 473 aa9.8□□□□□ -0.84
HMGCLL1-205ENST00000398661 LCP2Q13094 533 aa9.8□□□□□ -0.84
HMGCLL1-205ENST00000398661 PROX2Q3B8N5 592 aa9.8□□□□□ -0.84
HMGCLL1-205ENST00000398661 PLA2G4EQ3MJ16 856 aa9.8□□□□□ -0.84
HMGCLL1-205ENST00000398661 XKR7Q5GH72 579 aa9.8□□□□□ -0.84
HMGCLL1-205ENST00000398661 CPZQ66K79 652 aa9.8□□□□□ -0.84
HMGCLL1-205ENST00000398661 LETMD1Q6P1Q0 360 aa9.8□□□□□ -0.84
HMGCLL1-205ENST00000398661 CCDC117Q8IWD4 279 aaPredicted RBP9.8□□□□□ -0.84
HMGCLL1-205ENST00000398661 ARHGAP12Q8IWW6 846 aa9.8□□□□□ -0.84
HMGCLL1-205ENST00000398661 OR52E4Q8NGH9 312 aa9.8□□□□□ -0.84
HMGCLL1-205ENST00000398661 OR2T11Q8NH01 316 aa9.8□□□□□ -0.84
HMGCLL1-205ENST00000398661 BLOC1S5Q8TDH9 187 aa9.8□□□□□ -0.84
HMGCLL1-205ENST00000398661 SH3RF2Q8TEC5 729 aa9.8□□□□□ -0.84
HMGCLL1-205ENST00000398661 DNASE1L2Q92874 299 aa9.8□□□□□ -0.84
HMGCLL1-205ENST00000398661 SMIM14Q96QK8 99 aa9.8□□□□□ -0.84
HMGCLL1-205ENST00000398661 KCNN2Q9H2S1 579 aa9.8□□□□□ -0.84
HMGCLL1-205ENST00000398661 SEMA4BQ9NPR2 832 aaPredicted RBP9.8□□□□□ -0.84
HMGCLL1-205ENST00000398661 ASAH2Q9NR71 780 aa9.8□□□□□ -0.84
HMGCLL1-205ENST00000398661 TMEM45AQ9NWC5 275 aa9.8□□□□□ -0.84
HMGCLL1-205ENST00000398661 UCKL1Q9NWZ5 548 aa9.8□□□□□ -0.84
HMGCLL1-205ENST00000398661 A0A096LPI6 279 aa9.8□□□□□ -0.84
HMGCLL1-205ENST00000398661 ELOVL7A1L3X0 281 aa9.8□□□□□ -0.84
HMGCLL1-205ENST00000398661 E5RI56 91 aa9.8□□□□□ -0.84
HMGCLL1-205ENST00000398661 BET1O15155 118 aa9.8□□□□□ -0.84
HMGCLL1-205ENST00000398661 CACNG3O60359 315 aa9.8□□□□□ -0.84
HMGCLL1-205ENST00000398661 C1QBP02746 253 aa9.8□□□□□ -0.84
HMGCLL1-205ENST00000398661 CEBPBP17676 345 aa9.8□□□□□ -0.84
HMGCLL1-205ENST00000398661 POU3F3P20264 500 aaPredicted RBP9.8□□□□□ -0.84
HMGCLL1-205ENST00000398661 C21orf33P30042 268 aaPredicted RBP9.8□□□□□ -0.84
HMGCLL1-205ENST00000398661 CSTF2P33240 577 aaKnown RBP eCLIP9.8□□□□□ -0.84
HMGCLL1-205ENST00000398661 GNPDA1P46926 289 aa9.8□□□□□ -0.84
HMGCLL1-205ENST00000398661 DGKQP52824 942 aa9.8□□□□□ -0.84
HMGCLL1-205ENST00000398661 SCAPQ12770 1279 aa9.8□□□□□ -0.84
HMGCLL1-205ENST00000398661 OR4D1Q15615 310 aa9.8□□□□□ -0.84
HMGCLL1-205ENST00000398661 TAB1Q15750 504 aa9.8□□□□□ -0.84
HMGCLL1-205ENST00000398661 ZMAT1Q5H9K5 638 aa9.8□□□□□ -0.84
HMGCLL1-205ENST00000398661 TIGD3Q6B0B8 471 aa9.8□□□□□ -0.84
HMGCLL1-205ENST00000398661 KDM4DQ6B0I6 523 aa9.8□□□□□ -0.84
HMGCLL1-205ENST00000398661 CCDC71Q8IV32 467 aaPredicted RBP9.8□□□□□ -0.84
HMGCLL1-205ENST00000398661 TRIM48Q8IWZ4 208 aa9.8□□□□□ -0.84
HMGCLL1-205ENST00000398661 RDH10Q8IZV5 341 aa9.8□□□□□ -0.84
HMGCLL1-205ENST00000398661 VWA5B2Q8N398 1253 aa9.8□□□□□ -0.84
HMGCLL1-205ENST00000398661 CDYL2Q8N8U2 506 aa9.8□□□□□ -0.84
HMGCLL1-205ENST00000398661 LHFPL5Q8TAF8 219 aa9.8□□□□□ -0.84
HMGCLL1-205ENST00000398661 ZNF675Q8TD23 568 aa9.8□□□□□ -0.84
HMGCLL1-205ENST00000398661 C2orf15Q8WU43 125 aaKnown RBP9.8□□□□□ -0.84
HMGCLL1-205ENST00000398661 APH1BQ8WW43 257 aa9.8□□□□□ -0.84
HMGCLL1-205ENST00000398661 ASB15Q8WXK1 588 aa9.8□□□□□ -0.84
HMGCLL1-205ENST00000398661 NTAN1Q96AB6 310 aa9.8□□□□□ -0.84
HMGCLL1-205ENST00000398661 METTL2AQ96IZ6 378 aaKnown RBP9.8□□□□□ -0.84
HMGCLL1-205ENST00000398661 FRMD6Q96NE9 622 aa9.8□□□□□ -0.84
HMGCLL1-205ENST00000398661 ZNF599Q96NL3 588 aa9.8□□□□□ -0.84
HMGCLL1-205ENST00000398661 NECTIN4Q96NY8 510 aa9.8□□□□□ -0.84
HMGCLL1-205ENST00000398661 MCCC1Q96RQ3 725 aaPredicted RBP9.8□□□□□ -0.84
HMGCLL1-205ENST00000398661 SMURF1Q9HCE7 757 aa9.8□□□□□ -0.84
HMGCLL1-205ENST00000398661 DYRK4Q9NR20 520 aa9.8□□□□□ -0.84
HMGCLL1-205ENST00000398661 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.8□□□□□ -0.84
HMGCLL1-205ENST00000398661 DCAF13Q9NV06 445 aaKnown RBP9.8□□□□□ -0.84
HMGCLL1-205ENST00000398661 VAPAQ9P0L0 249 aa9.8□□□□□ -0.84
HMGCLL1-205ENST00000398661 KLHL21Q9UJP4 597 aa9.8□□□□□ -0.84
HMGCLL1-205ENST00000398661 TTC28Q96AY4 2481 aa9.79□□□□□ -0.84
HMGCLL1-205ENST00000398661 A0A075B6Q4 140 aa9.79□□□□□ -0.84
HMGCLL1-205ENST00000398661 A0A0B4J293 547 aa9.79□□□□□ -0.84
HMGCLL1-205ENST00000398661 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.79□□□□□ -0.84
HMGCLL1-205ENST00000398661 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.79□□□□□ -0.84
HMGCLL1-205ENST00000398661 A0A1W2PQ09 198 aa9.79□□□□□ -0.84
HMGCLL1-205ENST00000398661 A8MX80 341 aa9.79□□□□□ -0.84
HMGCLL1-205ENST00000398661 SLC9A3R1O14745 358 aaPredicted RBP9.79□□□□□ -0.84
HMGCLL1-205ENST00000398661 KIAA0513O60268 411 aa9.79□□□□□ -0.84
HMGCLL1-205ENST00000398661 GLP2RO95838 553 aa9.79□□□□□ -0.84
HMGCLL1-205ENST00000398661 MTHFD2P13995 350 aa9.79□□□□□ -0.84
HMGCLL1-205ENST00000398661 TACR2P21452 398 aa9.79□□□□□ -0.84
HMGCLL1-205ENST00000398661 HLA-DMAP28067 261 aa9.79□□□□□ -0.84
HMGCLL1-205ENST00000398661 EPHA2P29317 976 aa9.79□□□□□ -0.84
HMGCLL1-205ENST00000398661 HOXA9P31269 272 aa9.79□□□□□ -0.84
HMGCLL1-205ENST00000398661 CHRNA4P43681 627 aa9.79□□□□□ -0.84
HMGCLL1-205ENST00000398661 ERVK-21P61565 698 aa9.79□□□□□ -0.84
HMGCLL1-205ENST00000398661 CSNK2BP67870 215 aa9.79□□□□□ -0.84
HMGCLL1-205ENST00000398661 CREMQ03060 361 aa9.79□□□□□ -0.84
HMGCLL1-205ENST00000398661 CYP4F3Q08477 520 aa9.79□□□□□ -0.84
HMGCLL1-205ENST00000398661 SMARCB1Q12824 385 aa9.79□□□□□ -0.84
HMGCLL1-205ENST00000398661 IHHQ14623 411 aa9.79□□□□□ -0.84
HMGCLL1-205ENST00000398661 CCDC85BQ15834 202 aaPredicted RBP9.79□□□□□ -0.84
HMGCLL1-205ENST00000398661 CARD16Q5EG05 197 aa9.79□□□□□ -0.84
HMGCLL1-205ENST00000398661 MSANTD2Q6P1R3 559 aa9.79□□□□□ -0.84
HMGCLL1-205ENST00000398661 CEP68Q76N32 757 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms