RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 ANKDD1BA6NHY2 528 aa2.42□□□□□ -2.02
CD47-203ENST00000398258 PMS2P5A8MQ11 134 aa2.42□□□□□ -2.02
CD47-203ENST00000398258 ZNF197O14709 1029 aa2.42□□□□□ -2.02
CD47-203ENST00000398258 TEX28O15482 410 aa2.42□□□□□ -2.02
CD47-203ENST00000398258 TTI1O43156 1089 aa2.42□□□□□ -2.02
CD47-203ENST00000398258 CIDEAO60543 219 aa2.42□□□□□ -2.02
CD47-203ENST00000398258 ATP9AO75110 1047 aa2.42□□□□□ -2.02
CD47-203ENST00000398258 GLCEO94923 617 aa2.42□□□□□ -2.02
CD47-203ENST00000398258 RAF1P04049 648 aa2.42□□□□□ -2.02
CD47-203ENST00000398258 ATP1B1P05026 303 aa2.42□□□□□ -2.02
CD47-203ENST00000398258 SP9P0CG40 484 aa2.42□□□□□ -2.02
CD47-203ENST00000398258 STAG3L1P0CL83 205 aa2.42□□□□□ -2.02
CD47-203ENST00000398258 DLATP10515 647 aaKnown RBP2.42□□□□□ -2.02
CD47-203ENST00000398258 DARSP14868 501 aaKnown RBP2.42□□□□□ -2.02
CD47-203ENST00000398258 AZU1P20160 251 aa2.42□□□□□ -2.02
CD47-203ENST00000398258 LHCGRP22888 699 aa2.42□□□□□ -2.02
CD47-203ENST00000398258 SFTPDP35247 375 aa2.42□□□□□ -2.02
CD47-203ENST00000398258 CDKN1AP38936 164 aa2.42□□□□□ -2.02
CD47-203ENST00000398258 RPP38P78345 283 aaKnown RBP2.42□□□□□ -2.02
CD47-203ENST00000398258 CDR2Q01850 454 aa2.42□□□□□ -2.02
CD47-203ENST00000398258 TEFQ10587 303 aa2.42□□□□□ -2.02
CD47-203ENST00000398258 TRIM29Q14134 588 aa2.42□□□□□ -2.02
CD47-203ENST00000398258 RCN2Q14257 317 aa2.42□□□□□ -2.02
CD47-203ENST00000398258 STXBP2Q15833 593 aa2.42□□□□□ -2.02
CD47-203ENST00000398258 FAM53AQ6NSI3 398 aaPredicted RBP2.42□□□□□ -2.02
CD47-203ENST00000398258 TATDN1Q6P1N9 297 aa2.42□□□□□ -2.02
CD47-203ENST00000398258 TTC27Q6P3X3 843 aa2.42□□□□□ -2.02
CD47-203ENST00000398258 CTR9Q6PD62 1173 aa2.42□□□□□ -2.02
CD47-203ENST00000398258 TMEM270Q6UE05 265 aa2.42□□□□□ -2.02
CD47-203ENST00000398258 COX8CQ7Z4L0 72 aa2.42□□□□□ -2.02
CD47-203ENST00000398258 PRSS42Q7Z5A4 293 aa2.42□□□□□ -2.02
CD47-203ENST00000398258 AQP12AQ8IXF9 295 aa2.42□□□□□ -2.02
CD47-203ENST00000398258 KLHDC8BQ8IXV7 354 aa2.42□□□□□ -2.02
CD47-203ENST00000398258 GPC2Q8N158 579 aa2.42□□□□□ -2.02
CD47-203ENST00000398258 CCDC63Q8NA47 563 aa2.42□□□□□ -2.02
CD47-203ENST00000398258 SPC24Q8NBT2 197 aa2.42□□□□□ -2.02
CD47-203ENST00000398258 OR7A2PQ8NGA2 310 aa2.42□□□□□ -2.02
CD47-203ENST00000398258 OR5AP2Q8NGF4 316 aa2.42□□□□□ -2.02
CD47-203ENST00000398258 OR10V1Q8NGI7 309 aa2.42□□□□□ -2.02
CD47-203ENST00000398258 OR10G8Q8NGN5 311 aa2.42□□□□□ -2.02
CD47-203ENST00000398258 OR4C3Q8NH37 302 aa2.42□□□□□ -2.02
CD47-203ENST00000398258 UBLCP1Q8WVY7 318 aaPredicted RBP2.42□□□□□ -2.02
CD47-203ENST00000398258 APOBEC4Q8WW27 367 aaKnown RBP2.42□□□□□ -2.02
CD47-203ENST00000398258 KRT35Q92764 455 aa2.42□□□□□ -2.02
CD47-203ENST00000398258 TMEM143Q96AN5 459 aa2.42□□□□□ -2.02
CD47-203ENST00000398258 EPSTI1Q96J88 318 aa2.42□□□□□ -2.02
CD47-203ENST00000398258 LURAP1Q96LR2 239 aa2.42□□□□□ -2.02
CD47-203ENST00000398258 BTBD9Q96Q07 612 aa2.42□□□□□ -2.02
CD47-203ENST00000398258 PANX3Q96QZ0 392 aa2.42□□□□□ -2.02
CD47-203ENST00000398258 LPAR4Q99677 370 aa2.42□□□□□ -2.02
CD47-203ENST00000398258 TSPYL1Q9H0U9 437 aa2.42□□□□□ -2.02
CD47-203ENST00000398258 RIMS4Q9H426 269 aaPredicted RBP2.42□□□□□ -2.02
CD47-203ENST00000398258 C5orf66Q9H5L9 145 aa2.42□□□□□ -2.02
CD47-203ENST00000398258 EGLN3Q9H6Z9 239 aa2.42□□□□□ -2.02
CD47-203ENST00000398258 RNPEPL1Q9HAU8 725 aa2.42□□□□□ -2.02
CD47-203ENST00000398258 MAGEF1Q9HAY2 307 aa2.42□□□□□ -2.02
CD47-203ENST00000398258 SCRT2Q9NQ03 307 aa2.42□□□□□ -2.02
CD47-203ENST00000398258 COMMD8Q9NX08 183 aa2.42□□□□□ -2.02
CD47-203ENST00000398258 CYP39A1Q9NYL5 469 aa2.42□□□□□ -2.02
CD47-203ENST00000398258 OR6C2Q9NZP2 312 aa2.42□□□□□ -2.02
CD47-203ENST00000398258 APPL1Q9UKG1 709 aa2.42□□□□□ -2.02
CD47-203ENST00000398258 PILRBQ9UKJ0 227 aa2.42□□□□□ -2.02
CD47-203ENST00000398258 KCNJ14Q9UNX9 436 aa2.42□□□□□ -2.02
CD47-203ENST00000398258 RUVBL2Q9Y230 463 aaKnown RBP2.42□□□□□ -2.02
CD47-203ENST00000398258 R4GN57 208 aa2.42□□□□□ -2.02
CD47-203ENST00000398258 ACEP12821 1306 aa2.42□□□□□ -2.02
CD47-203ENST00000398258 A0A087WUV0 522 aaPredicted RBP2.41□□□□□ -2.02
CD47-203ENST00000398258 A0A0G2JLW4 131 aa2.41□□□□□ -2.02
CD47-203ENST00000398258 A0A1W2PRV1 198 aa2.41□□□□□ -2.02
CD47-203ENST00000398258 GTPBP10A4D1E9 387 aaKnown RBP2.41□□□□□ -2.02
CD47-203ENST00000398258 TRIM64A6NGJ6 449 aa2.41□□□□□ -2.02
CD47-203ENST00000398258 TRIM64BA6NI03 449 aa2.41□□□□□ -2.02
CD47-203ENST00000398258 DDX39AO00148 427 aaKnown RBP2.41□□□□□ -2.02
CD47-203ENST00000398258 EPHB6O15197 1021 aa2.41□□□□□ -2.02
CD47-203ENST00000398258 ACSL4O60488 711 aa2.41□□□□□ -2.02
CD47-203ENST00000398258 SEC24AO95486 1093 aa2.41□□□□□ -2.02
CD47-203ENST00000398258 SERPINB2P05120 415 aa2.41□□□□□ -2.02
CD47-203ENST00000398258 CD48P09326 243 aa2.41□□□□□ -2.02
CD47-203ENST00000398258 PATE4P0C8F1 98 aa2.41□□□□□ -2.02
CD47-203ENST00000398258 CFC1BP0CG36 223 aa2.41□□□□□ -2.02
CD47-203ENST00000398258 CFC1P0CG37 223 aa2.41□□□□□ -2.02
CD47-203ENST00000398258 MYOGP15173 224 aa2.41□□□□□ -2.02
CD47-203ENST00000398258 CEBPBP17676 345 aa2.41□□□□□ -2.02
CD47-203ENST00000398258 HLA-DPA1P20036 260 aa2.41□□□□□ -2.02
CD47-203ENST00000398258 RBMS1P29558 406 aaKnown RBP2.41□□□□□ -2.02
CD47-203ENST00000398258 ALDH1B1P30837 517 aa2.41□□□□□ -2.02
CD47-203ENST00000398258 CETN2P41208 172 aa2.41□□□□□ -2.02
CD47-203ENST00000398258 DNA2P51530 1060 aa2.41□□□□□ -2.02
CD47-203ENST00000398258 CLCN4P51793 760 aa2.41□□□□□ -2.02
CD47-203ENST00000398258 CLDN17P56750 224 aa2.41□□□□□ -2.02
CD47-203ENST00000398258 CETN1Q12798 172 aa2.41□□□□□ -2.02
CD47-203ENST00000398258 RPA4Q13156 261 aa2.41□□□□□ -2.02
CD47-203ENST00000398258 TRA2AQ13595 282 aaKnown RBP eCLIP2.41□□□□□ -2.02
CD47-203ENST00000398258 SQLEQ14534 574 aa2.41□□□□□ -2.02
CD47-203ENST00000398258 PPA1Q15181 289 aa2.41□□□□□ -2.02
CD47-203ENST00000398258 ZNF74Q16587 644 aa2.41□□□□□ -2.02
CD47-203ENST00000398258 KRTAP13-3Q3SY46 172 aa2.41□□□□□ -2.02
CD47-203ENST00000398258 LCN1P1Q5VSP4 162 aa2.41□□□□□ -2.02
CD47-203ENST00000398258 LRRC38Q5VT99 294 aa2.41□□□□□ -2.02
CD47-203ENST00000398258 ARHGAP17Q68EM7 881 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms