RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 NELL1Q92832 810 aa13.43□□□□□ -0.26
NUP98-204ENST00000397004 CASD1Q96PB1 797 aa13.43□□□□□ -0.26
NUP98-204ENST00000397004 EPYCQ99645 322 aa13.43□□□□□ -0.26
NUP98-204ENST00000397004 WDR70Q9NW82 654 aa13.43□□□□□ -0.26
NUP98-204ENST00000397004 NRG2O14511 850 aaPredicted RBP13.43□□□□□ -0.26
NUP98-204ENST00000397004 AOC2O75106 756 aa13.43□□□□□ -0.26
NUP98-204ENST00000397004 ANXA5P08758 320 aa13.43□□□□□ -0.26
NUP98-204ENST00000397004 PXNP49023 591 aaPredicted RBP13.43□□□□□ -0.26
NUP98-204ENST00000397004 CRHR2Q13324 411 aa13.43□□□□□ -0.26
NUP98-204ENST00000397004 CCSMST1Q4G0I0 132 aa13.43□□□□□ -0.26
NUP98-204ENST00000397004 GGTA1PQ4G0N0 100 aa13.43□□□□□ -0.26
NUP98-204ENST00000397004 INO80DQ53TQ3 878 aaPredicted RBP13.43□□□□□ -0.26
NUP98-204ENST00000397004 ZNF385BQ569K4 471 aa13.43□□□□□ -0.26
NUP98-204ENST00000397004 MLIPQ5VWP3 458 aa13.43□□□□□ -0.26
NUP98-204ENST00000397004 FRG2Q64ET8 278 aa13.43□□□□□ -0.26
NUP98-204ENST00000397004 C19orf48Q6RUI8 117 aa13.43□□□□□ -0.26
NUP98-204ENST00000397004 CRTC1Q6UUV9 634 aa13.43□□□□□ -0.26
NUP98-204ENST00000397004 UBE2R2Q712K3 238 aaPredicted RBP13.43□□□□□ -0.26
NUP98-204ENST00000397004 VASH1Q7L8A9 365 aaPredicted RBP13.43□□□□□ -0.26
NUP98-204ENST00000397004 TCAIMQ8N3R3 496 aa13.43□□□□□ -0.26
NUP98-204ENST00000397004 FRG2BQ96QU4 278 aa13.43□□□□□ -0.26
NUP98-204ENST00000397004 HTATIP2Q9BUP3 242 aa13.43□□□□□ -0.26
NUP98-204ENST00000397004 VN1R3Q9BXE9 311 aa13.43□□□□□ -0.26
NUP98-204ENST00000397004 CRLS1Q9UJA2 301 aa13.43□□□□□ -0.26
NUP98-204ENST00000397004 AP3M1Q9Y2T2 418 aa13.43□□□□□ -0.26
NUP98-204ENST00000397004 CCDC88CQ9P219 2028 aa13.43□□□□□ -0.26
NUP98-204ENST00000397004 TMEM202A6NGA9 273 aa13.43□□□□□ -0.26
NUP98-204ENST00000397004 NPIPB8E9PQR5 432 aa13.43□□□□□ -0.26
NUP98-204ENST00000397004 FAM227AF5H4B4 570 aa13.43□□□□□ -0.26
NUP98-204ENST00000397004 ALOX12P18054 663 aa13.43□□□□□ -0.26
NUP98-204ENST00000397004 OPRD1P41143 372 aa13.43□□□□□ -0.26
NUP98-204ENST00000397004 IDH2P48735 452 aaKnown RBP13.43□□□□□ -0.26
NUP98-204ENST00000397004 ARHGDIAP52565 204 aa13.43□□□□□ -0.26
NUP98-204ENST00000397004 TUBA1BP68363 451 aa13.43□□□□□ -0.26
NUP98-204ENST00000397004 PTSQ03393 145 aa13.43□□□□□ -0.26
NUP98-204ENST00000397004 ST3GAL4Q11206 333 aa13.43□□□□□ -0.26
NUP98-204ENST00000397004 PPIGQ13427 754 aaKnown RBP eCLIP13.43□□□□□ -0.265e-6■■■■□ 25.6
NUP98-204ENST00000397004 ARMCX4Q5H9R4 360 aa13.43□□□□□ -0.26
NUP98-204ENST00000397004 ZNF648Q5T619 568 aaPredicted RBP13.43□□□□□ -0.26
NUP98-204ENST00000397004 TUBA1AQ71U36 451 aa13.43□□□□□ -0.26
NUP98-204ENST00000397004 CCDC190Q86UF4 302 aa13.43□□□□□ -0.26
NUP98-204ENST00000397004 LMNTD1Q8N9Z9 388 aa13.43□□□□□ -0.26
NUP98-204ENST00000397004 OR6F1Q8NGZ6 308 aa13.43□□□□□ -0.26
NUP98-204ENST00000397004 WDR20Q8TBZ3 569 aa13.43□□□□□ -0.26
NUP98-204ENST00000397004 RAD9AQ99638 391 aa13.43□□□□□ -0.26
NUP98-204ENST00000397004 CCM2Q9BSQ5 444 aa13.43□□□□□ -0.26
NUP98-204ENST00000397004 MUTYHQ9UIF7 546 aa13.43□□□□□ -0.26
NUP98-204ENST00000397004 BOLA1Q9Y3E2 137 aa13.43□□□□□ -0.26
NUP98-204ENST00000397004 AGRPO00253 132 aa13.42□□□□□ -0.26
NUP98-204ENST00000397004 DYRK3O43781 588 aa13.42□□□□□ -0.26
NUP98-204ENST00000397004 SEMA3DO95025 777 aa13.42□□□□□ -0.26
NUP98-204ENST00000397004 TRPC1P48995 793 aa13.42□□□□□ -0.26
NUP98-204ENST00000397004 PRKCDQ05655 676 aa13.42□□□□□ -0.26
NUP98-204ENST00000397004 RGNQ15493 299 aa13.42□□□□□ -0.26
NUP98-204ENST00000397004 HECTD3Q5T447 861 aa13.42□□□□□ -0.26
NUP98-204ENST00000397004 OR8J2Q8NGG1 315 aa13.42□□□□□ -0.26
NUP98-204ENST00000397004 SLC12A9Q9BXP2 914 aa13.42□□□□□ -0.26
NUP98-204ENST00000397004 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.42□□□□□ -0.26
NUP98-204ENST00000397004 SPASTQ9UBP0 616 aa13.42□□□□□ -0.26
NUP98-204ENST00000397004 PCDH17O14917 1159 aa13.42□□□□□ -0.26
NUP98-204ENST00000397004 MRPS14O60783 128 aaKnown RBP13.42□□□□□ -0.26
NUP98-204ENST00000397004 RACK1P63244 317 aaKnown RBP13.42□□□□□ -0.26
NUP98-204ENST00000397004 TPGS1Q6ZTW0 290 aa13.42□□□□□ -0.26
NUP98-204ENST00000397004 B3GNT7Q8NFL0 401 aa13.42□□□□□ -0.26
NUP98-204ENST00000397004 CDC26Q8NHZ8 85 aa13.42□□□□□ -0.26
NUP98-204ENST00000397004 KCNS3Q9BQ31 491 aa13.42□□□□□ -0.26
NUP98-204ENST00000397004 NEK6Q9HC98 313 aa13.42□□□□□ -0.26
NUP98-204ENST00000397004 SPATA7Q9P0W8 599 aa13.42□□□□□ -0.26
NUP98-204ENST00000397004 N6AMT1Q9Y5N5 214 aa13.42□□□□□ -0.26
NUP98-204ENST00000397004 EVPLLA8MZ36 301 aa13.42□□□□□ -0.26
NUP98-204ENST00000397004 SGTAO43765 313 aa13.42□□□□□ -0.26
NUP98-204ENST00000397004 GPX5O75715 221 aa13.42□□□□□ -0.26
NUP98-204ENST00000397004 EPN2O95208 641 aa13.42□□□□□ -0.26
NUP98-204ENST00000397004 RFX2P48378 723 aa13.42□□□□□ -0.26
NUP98-204ENST00000397004 UGT2B15P54855 530 aa13.42□□□□□ -0.26
NUP98-204ENST00000397004 BCL7AQ4VC05 210 aa13.42□□□□□ -0.26
NUP98-204ENST00000397004 USP43Q70EL4 1123 aa13.42□□□□□ -0.26
NUP98-204ENST00000397004 SYT12Q8IV01 421 aa13.42□□□□□ -0.26
NUP98-204ENST00000397004 OR4K3Q96R72 315 aa13.42□□□□□ -0.26
NUP98-204ENST00000397004 MCCC1Q96RQ3 725 aaPredicted RBP13.42□□□□□ -0.26
NUP98-204ENST00000397004 RAPGEFL1Q9UHV5 662 aa13.42□□□□□ -0.26
NUP98-204ENST00000397004 RPS6KA6Q9UK32 745 aa13.42□□□□□ -0.26
NUP98-204ENST00000397004 PADI2Q9Y2J8 665 aa13.42□□□□□ -0.26
NUP98-204ENST00000397004 PCDHB11Q9Y5F2 797 aa13.42□□□□□ -0.26
NUP98-204ENST00000397004 A8MV72 311 aaPredicted RBP13.41□□□□□ -0.26
NUP98-204ENST00000397004 E7EQ34 232 aa13.41□□□□□ -0.26
NUP98-204ENST00000397004 H3BM21 787 aa13.41□□□□□ -0.26
NUP98-204ENST00000397004 KLHL18O94889 574 aa13.41□□□□□ -0.26
NUP98-204ENST00000397004 HSMCR30P0CW71 290 aa13.41□□□□□ -0.26
NUP98-204ENST00000397004 ITGALP20701 1170 aa13.41□□□□□ -0.26
NUP98-204ENST00000397004 COPZ1P61923 177 aa13.41□□□□□ -0.26
NUP98-204ENST00000397004 CHIT1Q13231 466 aa13.41□□□□□ -0.26
NUP98-204ENST00000397004 MPEG1Q2M385 716 aa13.41□□□□□ -0.26
NUP98-204ENST00000397004 LILRA3Q8N6C8 439 aaPredicted RBP13.41□□□□□ -0.26
NUP98-204ENST00000397004 OR2A14Q96R47 310 aa13.41□□□□□ -0.26
NUP98-204ENST00000397004 COPS8Q99627 209 aa13.41□□□□□ -0.26
NUP98-204ENST00000397004 ITGB1BP2Q9UKP3 347 aa13.41□□□□□ -0.26
NUP98-204ENST00000397004 KIAA1671Q9BY89 1806 aa13.41□□□□□ -0.26
NUP98-204ENST00000397004 KIAA0513O60268 411 aa13.41□□□□□ -0.26
NUP98-204ENST00000397004 ARHGEF15O94989 841 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms