RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 WDR48Q8TAF3 677 aa12.17□□□□□ -0.46
TRIM39-204ENST00000396548 ANKMY1Q9P2S6 941 aa12.17□□□□□ -0.46
TRIM39-204ENST00000396548 SPAG17Q6Q759 2223 aa12.17□□□□□ -0.46
TRIM39-204ENST00000396548 FRYLO94915 3013 aa12.17□□□□□ -0.46
TRIM39-204ENST00000396548 PLPP1O14494 284 aa12.17□□□□□ -0.46
TRIM39-204ENST00000396548 MRASO14807 208 aa12.17□□□□□ -0.46
TRIM39-204ENST00000396548 SEMA3DO95025 777 aa12.17□□□□□ -0.46
TRIM39-204ENST00000396548 GSTM2P28161 218 aa12.17□□□□□ -0.46
TRIM39-204ENST00000396548 TIA1P31483 386 aaKnown RBP eCLIP12.17□□□□□ -0.46
TRIM39-204ENST00000396548 BSGP35613 385 aa12.17□□□□□ -0.46
TRIM39-204ENST00000396548 AHRP35869 848 aa12.17□□□□□ -0.46
TRIM39-204ENST00000396548 MTTPP55157 894 aa12.17□□□□□ -0.46
TRIM39-204ENST00000396548 FBXO42Q6P3S6 717 aa12.17□□□□□ -0.46
TRIM39-204ENST00000396548 PLD3Q8IV08 490 aa12.17□□□□□ -0.46
TRIM39-204ENST00000396548 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.17□□□□□ -0.46
TRIM39-204ENST00000396548 THTPAQ9BU02 230 aa12.17□□□□□ -0.46
TRIM39-204ENST00000396548 EBPLQ9BY08 206 aa12.17□□□□□ -0.46
TRIM39-204ENST00000396548 WDR41Q9HAD4 459 aa12.17□□□□□ -0.46
TRIM39-204ENST00000396548 SNX7Q9UNH6 387 aa12.17□□□□□ -0.46
TRIM39-204ENST00000396548 KLHL20Q9Y2M5 609 aa12.17□□□□□ -0.46
TRIM39-204ENST00000396548 PCDHGA4Q9Y5G9 962 aa12.17□□□□□ -0.46
TRIM39-204ENST00000396548 OR5K3A6NET4 321 aa12.16□□□□□ -0.46
TRIM39-204ENST00000396548 ISM1B1AKI9 464 aa12.16□□□□□ -0.46
TRIM39-204ENST00000396548 SORBS2O94875 1100 aaKnown RBP12.16□□□□□ -0.46
TRIM39-204ENST00000396548 FKBP9O95302 570 aa12.16□□□□□ -0.46
TRIM39-204ENST00000396548 POLR2CP19387 275 aaPredicted RBP12.16□□□□□ -0.46
TRIM39-204ENST00000396548 DHPSP49366 369 aaPredicted RBP12.16□□□□□ -0.46
TRIM39-204ENST00000396548 KCNK10P57789 538 aa12.16□□□□□ -0.46
TRIM39-204ENST00000396548 MXRA7P84157 204 aa12.16□□□□□ -0.46
TRIM39-204ENST00000396548 PIGGQ5H8A4 983 aa12.16□□□□□ -0.46
TRIM39-204ENST00000396548 SPESP1Q6UW49 350 aa12.16□□□□□ -0.46
TRIM39-204ENST00000396548 DLEU7Q6UYE1 221 aa12.16□□□□□ -0.46
TRIM39-204ENST00000396548 SCUBE1Q8IWY4 988 aa12.16□□□□□ -0.46
TRIM39-204ENST00000396548 ZBTB44Q8NCP5 570 aa12.16□□□□□ -0.46
TRIM39-204ENST00000396548 CLHC1Q8NHS4 586 aa12.16□□□□□ -0.46
TRIM39-204ENST00000396548 TM4SF19Q96DZ7 209 aa12.16□□□□□ -0.46
TRIM39-204ENST00000396548 TMEM181Q9P2C4 612 aa12.16□□□□□ -0.46
TRIM39-204ENST00000396548 SLC7A8Q9UHI5 535 aa12.16□□□□□ -0.46
TRIM39-204ENST00000396548 PRPF19Q9UMS4 504 aaKnown RBP12.16□□□□□ -0.46
TRIM39-204ENST00000396548 CCDC154A6NI56 674 aa12.16□□□□□ -0.46
TRIM39-204ENST00000396548 C4orf51C9J302 202 aa12.16□□□□□ -0.46
TRIM39-204ENST00000396548 OR1F1O43749 312 aa12.16□□□□□ -0.46
TRIM39-204ENST00000396548 PRMT3O60678 531 aa12.16□□□□□ -0.46
TRIM39-204ENST00000396548 HNRNPH1P31943 449 aaKnown RBP12.16□□□□□ -0.46
TRIM39-204ENST00000396548 DGKQP52824 942 aa12.16□□□□□ -0.46
TRIM39-204ENST00000396548 PHEXP78562 749 aa12.16□□□□□ -0.46
TRIM39-204ENST00000396548 PLCL1Q15111 1095 aa12.16□□□□□ -0.46
TRIM39-204ENST00000396548 TEAD4Q15561 434 aa12.16□□□□□ -0.46
TRIM39-204ENST00000396548 DEFB133Q30KQ1 61 aa12.16□□□□□ -0.46
TRIM39-204ENST00000396548 CAMKMTQ7Z624 323 aa12.16□□□□□ -0.46
TRIM39-204ENST00000396548 MINDY1Q8N5J2 469 aa12.16□□□□□ -0.46
TRIM39-204ENST00000396548 AVL9Q8NBF6 648 aa12.16□□□□□ -0.46
TRIM39-204ENST00000396548 TTLQ8NG68 377 aa12.16□□□□□ -0.46
TRIM39-204ENST00000396548 DPY30Q9C005 99 aa12.16□□□□□ -0.46
TRIM39-204ENST00000396548 NMRK1Q9NWW6 199 aa12.16□□□□□ -0.46
TRIM39-204ENST00000396548 NDE1Q9NXR1 346 aa12.16□□□□□ -0.46
TRIM39-204ENST00000396548 ABCD2Q9UBJ2 740 aa12.16□□□□□ -0.46
TRIM39-204ENST00000396548 LRIT2A6NDA9 550 aa12.16□□□□□ -0.46
TRIM39-204ENST00000396548 ANKDD1BA6NHY2 528 aa12.16□□□□□ -0.46
TRIM39-204ENST00000396548 LILRA5A6NI73 299 aa12.16□□□□□ -0.46
TRIM39-204ENST00000396548 C2orf74A8MZ97 194 aa12.16□□□□□ -0.46
TRIM39-204ENST00000396548 SAP18O00422 153 aaKnown RBP12.16□□□□□ -0.46
TRIM39-204ENST00000396548 SDC3O75056 442 aa12.16□□□□□ -0.46
TRIM39-204ENST00000396548 SH3BGRLO75368 114 aa12.16□□□□□ -0.46
TRIM39-204ENST00000396548 IL6P05231 212 aa12.16□□□□□ -0.46
TRIM39-204ENST00000396548 TPP2P29144 1249 aaPredicted RBP12.16□□□□□ -0.46
TRIM39-204ENST00000396548 HNRNPFP52597 415 aaKnown RBP12.16□□□□□ -0.46
TRIM39-204ENST00000396548 PPP1CAP62136 330 aa12.16□□□□□ -0.46
TRIM39-204ENST00000396548 ACSM2AQ08AH3 577 aa12.16□□□□□ -0.46
TRIM39-204ENST00000396548 BNIP3Q12983 259 aa12.16□□□□□ -0.46
TRIM39-204ENST00000396548 UGT8Q16880 541 aa12.16□□□□□ -0.46
TRIM39-204ENST00000396548 ACSM2BQ68CK6 577 aa12.16□□□□□ -0.46
TRIM39-204ENST00000396548 RIPOR1Q6ZS17 1223 aa12.16□□□□□ -0.46
TRIM39-204ENST00000396548 ZNF438Q7Z4V0 828 aa12.16□□□□□ -0.46
TRIM39-204ENST00000396548 TRIM73Q86UV7 250 aa12.16□□□□□ -0.46
TRIM39-204ENST00000396548 FAM9CQ8IZT9 166 aa12.16□□□□□ -0.46
TRIM39-204ENST00000396548 FBXW8Q8N3Y1 598 aa12.16□□□□□ -0.46
TRIM39-204ENST00000396548 ELF4Q99607 663 aaPredicted RBP12.16□□□□□ -0.46
TRIM39-204ENST00000396548 DENND2DQ9H6A0 471 aaPredicted RBP12.16□□□□□ -0.46
TRIM39-204ENST00000396548 SERHLQ9NQF3 203 aa12.16□□□□□ -0.46
TRIM39-204ENST00000396548 SLAMF8Q9P0V8 285 aa12.16□□□□□ -0.46
TRIM39-204ENST00000396548 CD300AQ9UGN4 299 aa12.16□□□□□ -0.46
TRIM39-204ENST00000396548 MCM8Q9UJA3 840 aa12.16□□□□□ -0.46
TRIM39-204ENST00000396548 SCN2BO60939 215 aa12.15□□□□□ -0.46
TRIM39-204ENST00000396548 NPPAP01160 153 aa12.15□□□□□ -0.46
TRIM39-204ENST00000396548 EZRP15311 586 aaKnown RBP12.15□□□□□ -0.46
TRIM39-204ENST00000396548 CNR2P34972 360 aa12.15□□□□□ -0.46
TRIM39-204ENST00000396548 WNT3P56703 355 aa12.15□□□□□ -0.46
TRIM39-204ENST00000396548 TIGD2Q4W5G0 525 aa12.15□□□□□ -0.46
TRIM39-204ENST00000396548 SPANXN4Q5MJ08 99 aa12.15□□□□□ -0.46
TRIM39-204ENST00000396548 C6orf132Q5T0Z8 1188 aa12.15□□□□□ -0.46
TRIM39-204ENST00000396548 SLC2A7Q6PXP3 512 aa12.15□□□□□ -0.46
TRIM39-204ENST00000396548 VN1R4Q7Z5H5 301 aa12.15□□□□□ -0.46
TRIM39-204ENST00000396548 ZNF761Q86XN6 746 aaPredicted RBP12.15□□□□□ -0.46
TRIM39-204ENST00000396548 RSC1A1Q92681 617 aa12.15□□□□□ -0.46
TRIM39-204ENST00000396548 ZUFSPQ96AP4 578 aa12.15□□□□□ -0.46
TRIM39-204ENST00000396548 TSSK3Q96PN8 268 aa12.15□□□□□ -0.46
TRIM39-204ENST00000396548 F2RL3Q96RI0 385 aa12.15□□□□□ -0.46
TRIM39-204ENST00000396548 LEF1Q9UJU2 399 aaPredicted RBP12.15□□□□□ -0.46
TRIM39-204ENST00000396548 POMT2Q9UKY4 750 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms