RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 KIAA1958Q8N8K9 716 aa13.82□□□□□ -0.2
CLIP2-203ENST00000395060 C7orf57Q8NEG2 295 aa13.82□□□□□ -0.2
CLIP2-203ENST00000395060 TCF25Q9BQ70 676 aa13.82□□□□□ -0.2
CLIP2-203ENST00000395060 BCL7BQ9BQE9 202 aa13.82□□□□□ -0.2
CLIP2-203ENST00000395060 P2RY12Q9H244 342 aa13.82□□□□□ -0.2
CLIP2-203ENST00000395060 TPT1P8Q9HAU6 139 aa13.82□□□□□ -0.2
CLIP2-203ENST00000395060 RPS6KA6Q9UK32 745 aa13.82□□□□□ -0.2
CLIP2-203ENST00000395060 DOCK4Q8N1I0 1966 aa13.82□□□□□ -0.2
CLIP2-203ENST00000395060 TSC22D2O75157 780 aa13.82□□□□□ -0.2
CLIP2-203ENST00000395060 SNX4O95219 450 aa13.82□□□□□ -0.2
CLIP2-203ENST00000395060 RPL17P18621 184 aaKnown RBP13.82□□□□□ -0.2
CLIP2-203ENST00000395060 EPORP19235 508 aa13.82□□□□□ -0.2
CLIP2-203ENST00000395060 CACNG1Q06432 222 aa13.82□□□□□ -0.2
CLIP2-203ENST00000395060 PPIGQ13427 754 aaKnown RBP eCLIP13.82□□□□□ -0.22e-7■■■□□ 14.8
CLIP2-203ENST00000395060 HKDC1Q2TB90 917 aa13.82□□□□□ -0.2
CLIP2-203ENST00000395060 NOXRED1Q6NXP6 359 aa13.82□□□□□ -0.2
CLIP2-203ENST00000395060 ZNF852Q6ZMS4 543 aa13.82□□□□□ -0.2
CLIP2-203ENST00000395060 ANKS3Q6ZW76 656 aa13.82□□□□□ -0.2
CLIP2-203ENST00000395060 COQ8BQ96D53 544 aa13.82□□□□□ -0.2
CLIP2-203ENST00000395060 TSPAN18Q96SJ8 248 aa13.82□□□□□ -0.2
CLIP2-203ENST00000395060 RPRD1BQ9NQG5 326 aaKnown RBP13.82□□□□□ -0.2
CLIP2-203ENST00000395060 ZNF226Q9NYT6 803 aa13.82□□□□□ -0.2
CLIP2-203ENST00000395060 IL17CQ9P0M4 197 aa13.82□□□□□ -0.2
CLIP2-203ENST00000395060 OARD1Q9Y530 152 aa13.82□□□□□ -0.2
CLIP2-203ENST00000395060 PEX16Q9Y5Y5 336 aa13.82□□□□□ -0.2
CLIP2-203ENST00000395060 A0A1W2PQ09 198 aa13.81□□□□□ -0.2
CLIP2-203ENST00000395060 SAP18O00422 153 aaKnown RBP13.81□□□□□ -0.2
CLIP2-203ENST00000395060 ARHGAP33O14559 1287 aa13.81□□□□□ -0.2
CLIP2-203ENST00000395060 PCDH17O14917 1159 aa13.81□□□□□ -0.2
CLIP2-203ENST00000395060 KPNA5O15131 536 aa13.81□□□□□ -0.2
CLIP2-203ENST00000395060 GPX5O75715 221 aa13.81□□□□□ -0.2
CLIP2-203ENST00000395060 ETFAP13804 333 aa13.81□□□□□ -0.2
CLIP2-203ENST00000395060 DGKAP23743 735 aa13.81□□□□□ -0.2
CLIP2-203ENST00000395060 RPS19P39019 145 aaKnown RBP13.81□□□□□ -0.2
CLIP2-203ENST00000395060 CRYBA2P53672 197 aa13.81□□□□□ -0.2
CLIP2-203ENST00000395060 HOXC5Q00444 222 aa13.81□□□□□ -0.2
CLIP2-203ENST00000395060 CCDC85BQ15834 202 aaPredicted RBP13.81□□□□□ -0.2
CLIP2-203ENST00000395060 UGT8Q16880 541 aa13.81□□□□□ -0.2
CLIP2-203ENST00000395060 ZSWIM9Q86XI8 627 aa13.81□□□□□ -0.2
CLIP2-203ENST00000395060 ST6GAL2Q96JF0 529 aa13.81□□□□□ -0.2
CLIP2-203ENST00000395060 HRASLS5Q96KN8 279 aa13.81□□□□□ -0.2
CLIP2-203ENST00000395060 YME1L1Q96TA2 773 aa13.81□□□□□ -0.2
CLIP2-203ENST00000395060 OR2B2Q9GZK3 357 aa13.81□□□□□ -0.2
CLIP2-203ENST00000395060 DNAJC27Q9NZQ0 273 aa13.81□□□□□ -0.2
CLIP2-203ENST00000395060 CD84Q9UIB8 345 aa13.81□□□□□ -0.2
CLIP2-203ENST00000395060 UNCXA6NJT0 531 aa13.81□□□□□ -0.2
CLIP2-203ENST00000395060 CCND3P30281 292 aaPredicted RBP13.81□□□□□ -0.2
CLIP2-203ENST00000395060 PAQR6Q6TCH4 344 aa13.81□□□□□ -0.2
CLIP2-203ENST00000395060 RFPL4BQ6ZWI9 263 aa13.81□□□□□ -0.2
CLIP2-203ENST00000395060 TRIM46Q7Z4K8 759 aa13.81□□□□□ -0.2
CLIP2-203ENST00000395060 RAB43Q86YS6 212 aa13.81□□□□□ -0.2
CLIP2-203ENST00000395060 UBQLNLQ8IYU4 475 aa13.81□□□□□ -0.2
CLIP2-203ENST00000395060 SLC34A3Q8N130 599 aa13.81□□□□□ -0.2
CLIP2-203ENST00000395060 OR2A14Q96R47 310 aa13.81□□□□□ -0.2
CLIP2-203ENST00000395060 ASPNQ9BXN1 380 aa13.81□□□□□ -0.2
CLIP2-203ENST00000395060 IL26Q9NPH9 171 aa13.81□□□□□ -0.2
CLIP2-203ENST00000395060 MEIOCA2RUB1 952 aa13.81□□□□□ -0.2
CLIP2-203ENST00000395060 PRAMEF4O60810 478 aa13.81□□□□□ -0.2
CLIP2-203ENST00000395060 KLKB1P03952 638 aa13.81□□□□□ -0.2
CLIP2-203ENST00000395060 EBLN1P0CF75 366 aa13.81□□□□□ -0.2
CLIP2-203ENST00000395060 HLA-EP13747 358 aa13.81□□□□□ -0.2
CLIP2-203ENST00000395060 MAPKAPK2P49137 400 aa13.81□□□□□ -0.2
CLIP2-203ENST00000395060 CAV3P56539 151 aa13.81□□□□□ -0.2
CLIP2-203ENST00000395060 ARPC4P59998 168 aa13.81□□□□□ -0.2
CLIP2-203ENST00000395060 ARF5P84085 180 aa13.81□□□□□ -0.2
CLIP2-203ENST00000395060 LRRC74AQ0VAA2 488 aa13.81□□□□□ -0.2
CLIP2-203ENST00000395060 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.81□□□□□ -0.2
CLIP2-203ENST00000395060 COX20Q5RI15 118 aa13.81□□□□□ -0.2
CLIP2-203ENST00000395060 LRIF1Q5T3J3 769 aa13.81□□□□□ -0.2
CLIP2-203ENST00000395060 PRAMEF9Q5VWM5 478 aa13.81□□□□□ -0.2
CLIP2-203ENST00000395060 ERAP2Q6P179 960 aa13.81□□□□□ -0.2
CLIP2-203ENST00000395060 UBE2R2Q712K3 238 aaPredicted RBP13.81□□□□□ -0.2
CLIP2-203ENST00000395060 GPR65Q8IYL9 337 aa13.81□□□□□ -0.2
CLIP2-203ENST00000395060 COQ3Q9NZJ6 369 aa13.81□□□□□ -0.2
CLIP2-203ENST00000395060 MYO16Q9Y6X6 1858 aa13.81□□□□□ -0.2
CLIP2-203ENST00000395060 GREB1Q4ZG55 1949 aa13.8□□□□□ -0.2
CLIP2-203ENST00000395060 MANSC4A6NHS7 340 aaPredicted RBP13.8□□□□□ -0.2
CLIP2-203ENST00000395060 ACSL4O60488 711 aa13.8□□□□□ -0.2
CLIP2-203ENST00000395060 ANXA5P08758 320 aa13.8□□□□□ -0.2
CLIP2-203ENST00000395060 CLEC2LP0C7M8 214 aa13.8□□□□□ -0.2
CLIP2-203ENST00000395060 GGT2P36268 569 aa13.8□□□□□ -0.2
CLIP2-203ENST00000395060 PRKCZQ05513 592 aa13.8□□□□□ -0.2
CLIP2-203ENST00000395060 PRKCDQ05655 676 aa13.8□□□□□ -0.2
CLIP2-203ENST00000395060 TBCEQ15813 527 aaPredicted RBP13.8□□□□□ -0.2
CLIP2-203ENST00000395060 DUOXA1Q1HG43 343 aa13.8□□□□□ -0.2
CLIP2-203ENST00000395060 SYCE2Q6PIF2 218 aa13.8□□□□□ -0.2
CLIP2-203ENST00000395060 FAM131AQ6UXB0 335 aa13.8□□□□□ -0.2
CLIP2-203ENST00000395060 RSPO2Q6UXX9 243 aaPredicted RBP13.8□□□□□ -0.2
CLIP2-203ENST00000395060 EIF3MQ7L2H7 374 aaKnown RBP13.8□□□□□ -0.2
CLIP2-203ENST00000395060 SERINC5Q86VE9 423 aa13.8□□□□□ -0.2
CLIP2-203ENST00000395060 VRK3Q8IV63 474 aa13.8□□□□□ -0.2
CLIP2-203ENST00000395060 BBS7Q8IWZ6 715 aa13.8□□□□□ -0.2
CLIP2-203ENST00000395060 CELF5Q8N6W0 485 aaKnown RBP13.8□□□□□ -0.2
CLIP2-203ENST00000395060 TRMT61AQ96FX7 289 aaKnown RBP13.8□□□□□ -0.2
CLIP2-203ENST00000395060 MED8Q96G25 268 aa13.8□□□□□ -0.2
CLIP2-203ENST00000395060 TMEM39AQ9NV64 488 aa13.8□□□□□ -0.2
CLIP2-203ENST00000395060 CFAP20Q9Y6A4 193 aaKnown RBP13.8□□□□□ -0.2
CLIP2-203ENST00000395060 TRAV19A0A0A6YYK7 116 aa13.8□□□□□ -0.2
CLIP2-203ENST00000395060 FAM172BPA6NC97 362 aa13.8□□□□□ -0.2
CLIP2-203ENST00000395060 TRBC1P01850 177 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 181.7 ms