RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 BBS2Q9BXC9 721 aa18.24■□□□□ 0.51
HOXC6-202ENST00000394331 KIF17Q9P2E2 1029 aa18.24■□□□□ 0.51
HOXC6-202ENST00000394331 RIMKLBQ9ULI2 386 aa18.24■□□□□ 0.51
HOXC6-202ENST00000394331 MICAL3Q7RTP6 2002 aa18.23■□□□□ 0.51
HOXC6-202ENST00000394331 OR4F21O95013 312 aa18.23■□□□□ 0.51
HOXC6-202ENST00000394331 HLA-DQB1P01920 261 aa18.23■□□□□ 0.51
HOXC6-202ENST00000394331 ZNF250P15622 560 aa18.23■□□□□ 0.51
HOXC6-202ENST00000394331 RORCP51449 518 aa18.23■□□□□ 0.51
HOXC6-202ENST00000394331 RRAS2P62070 204 aaPredicted RBP18.23■□□□□ 0.51
HOXC6-202ENST00000394331 ZNF235Q14590 738 aa18.23■□□□□ 0.51
HOXC6-202ENST00000394331 TAB1Q15750 504 aa18.23■□□□□ 0.51
HOXC6-202ENST00000394331 AANATQ16613 207 aa18.23■□□□□ 0.51
HOXC6-202ENST00000394331 OR4F3Q6IEY1 312 aa18.23■□□□□ 0.51
HOXC6-202ENST00000394331 SPNS2Q8IVW8 549 aa18.23■□□□□ 0.51
HOXC6-202ENST00000394331 LINC00518Q8N0U6 118 aa18.23■□□□□ 0.51
HOXC6-202ENST00000394331 UBE2FQ969M7 185 aa18.23■□□□□ 0.51
HOXC6-202ENST00000394331 KIAA1191Q96A73 305 aa18.23■□□□□ 0.51
HOXC6-202ENST00000394331 TESCQ96BS2 214 aa18.23■□□□□ 0.51
HOXC6-202ENST00000394331 TAPBPLQ9BX59 468 aa18.23■□□□□ 0.51
HOXC6-202ENST00000394331 IKZF5Q9H5V7 419 aa18.23■□□□□ 0.51
HOXC6-202ENST00000394331 TLR8Q9NR97 1041 aaKnown RBP18.23■□□□□ 0.51
HOXC6-202ENST00000394331 C1orf109Q9NX04 203 aa18.23■□□□□ 0.51
HOXC6-202ENST00000394331 PDP1Q9P0J1 537 aaPredicted RBP18.23■□□□□ 0.51
HOXC6-202ENST00000394331 SYN3O14994 580 aa18.23■□□□□ 0.51
HOXC6-202ENST00000394331 RGS5O15539 181 aa18.23■□□□□ 0.51
HOXC6-202ENST00000394331 ATG13O75143 517 aa18.23■□□□□ 0.51
HOXC6-202ENST00000394331 RPP40O75818 363 aaKnown RBP18.23■□□□□ 0.51
HOXC6-202ENST00000394331 TBX18O95935 607 aa18.23■□□□□ 0.51
HOXC6-202ENST00000394331 OR1E1P30953 314 aa18.23■□□□□ 0.51
HOXC6-202ENST00000394331 AKT1P31749 480 aa18.23■□□□□ 0.51
HOXC6-202ENST00000394331 GZMMP51124 257 aa18.23■□□□□ 0.51
HOXC6-202ENST00000394331 CAMK2GQ13555 558 aaPredicted RBP18.23■□□□□ 0.51
HOXC6-202ENST00000394331 SEMA3AQ14563 771 aa18.23■□□□□ 0.51
HOXC6-202ENST00000394331 C10orf120Q5SQS8 335 aa18.23■□□□□ 0.51
HOXC6-202ENST00000394331 TYW3Q6IPR3 259 aaKnown RBP18.23■□□□□ 0.51
HOXC6-202ENST00000394331 PAMR1Q6UXH9 720 aa18.23■□□□□ 0.51
HOXC6-202ENST00000394331 SLC24A5Q71RS6 500 aa18.23■□□□□ 0.51
HOXC6-202ENST00000394331 MSRB3Q8IXL7 192 aa18.23■□□□□ 0.51
HOXC6-202ENST00000394331 PGBD3Q8N328 593 aa18.23■□□□□ 0.51
HOXC6-202ENST00000394331 ZNF680Q8NEM1 530 aa18.23■□□□□ 0.51
HOXC6-202ENST00000394331 NLGN4YQ8NFZ3 816 aaPredicted RBP18.23■□□□□ 0.51
HOXC6-202ENST00000394331 NETO1Q8TDF5 533 aa18.23■□□□□ 0.51
HOXC6-202ENST00000394331 MSANTD3Q96H12 275 aa18.23■□□□□ 0.51
HOXC6-202ENST00000394331 ZC4H2Q9NQZ6 224 aa18.23■□□□□ 0.51
HOXC6-202ENST00000394331 TRBV5-3A0A0A0MS03 114 aa18.22■□□□□ 0.51
HOXC6-202ENST00000394331 BTN3A3O00478 584 aa18.22■□□□□ 0.51
HOXC6-202ENST00000394331 DDCP20711 480 aa18.22■□□□□ 0.51
HOXC6-202ENST00000394331 OGNP20774 298 aaKnown RBP18.22■□□□□ 0.51
HOXC6-202ENST00000394331 GGT2P36268 569 aa18.22■□□□□ 0.51
HOXC6-202ENST00000394331 INO80DQ53TQ3 878 aaPredicted RBP18.22■□□□□ 0.51
HOXC6-202ENST00000394331 CLLU1Q5K131 121 aa18.22■□□□□ 0.51
HOXC6-202ENST00000394331 Q6ZSR9 355 aa18.22■□□□□ 0.51
HOXC6-202ENST00000394331 EFHBQ8N7U6 833 aa18.22■□□□□ 0.51
HOXC6-202ENST00000394331 OR8K5Q8NH50 307 aa18.22■□□□□ 0.51
HOXC6-202ENST00000394331 STAG3L4Q8TBR4 150 aa18.22■□□□□ 0.51
HOXC6-202ENST00000394331 TRMT61AQ96FX7 289 aaKnown RBP18.22■□□□□ 0.51
HOXC6-202ENST00000394331 CDCA4Q9BXL8 241 aa18.22■□□□□ 0.51
HOXC6-202ENST00000394331 ZNF225Q9UK10 706 aa18.22■□□□□ 0.51
HOXC6-202ENST00000394331 PRG3Q9Y2Y8 225 aaPredicted RBP18.22■□□□□ 0.51
HOXC6-202ENST00000394331 MYL12BO14950 172 aa18.22■□□□□ 0.51
HOXC6-202ENST00000394331 KLK8O60259 260 aa18.22■□□□□ 0.51
HOXC6-202ENST00000394331 PRAMEF11O60813 436 aa18.22■□□□□ 0.51
HOXC6-202ENST00000394331 SEMG1P04279 462 aa18.22■□□□□ 0.51
HOXC6-202ENST00000394331 MYL12AP19105 171 aa18.22■□□□□ 0.51
HOXC6-202ENST00000394331 DGKQP52824 942 aa18.22■□□□□ 0.51
HOXC6-202ENST00000394331 CACHD1Q5VU97 1274 aa18.22■□□□□ 0.51
HOXC6-202ENST00000394331 LAX1Q8IWV1 398 aa18.22■□□□□ 0.51
HOXC6-202ENST00000394331 KLHDC9Q8NEP7 349 aa18.22■□□□□ 0.51
HOXC6-202ENST00000394331 GPR152Q8TDT2 470 aa18.22■□□□□ 0.51
HOXC6-202ENST00000394331 BARHL1Q9BZE3 327 aa18.22■□□□□ 0.51
HOXC6-202ENST00000394331 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.22■□□□□ 0.51
HOXC6-202ENST00000394331 PTTG3PQ9NZH4 202 aa18.22■□□□□ 0.51
HOXC6-202ENST00000394331 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.22■□□□□ 0.51
HOXC6-202ENST00000394331 UBA6A0AVT1 1052 aaPredicted RBP18.22■□□□□ 0.51
HOXC6-202ENST00000394331 H3BUI4 141 aa18.22■□□□□ 0.51
HOXC6-202ENST00000394331 PLA2G10O15496 165 aa18.22■□□□□ 0.51
HOXC6-202ENST00000394331 IGLV3-27P01718 113 aa18.22■□□□□ 0.51
HOXC6-202ENST00000394331 G6PDP11413 515 aa18.22■□□□□ 0.51
HOXC6-202ENST00000394331 RING1Q06587 406 aa18.22■□□□□ 0.51
HOXC6-202ENST00000394331 CRHR2Q13324 411 aa18.22■□□□□ 0.51
HOXC6-202ENST00000394331 ZNF267Q14586 743 aaPredicted RBP18.22■□□□□ 0.51
HOXC6-202ENST00000394331 CTXN3Q4LDR2 81 aa18.22■□□□□ 0.51
HOXC6-202ENST00000394331 FAM124AQ86V42 546 aa18.22■□□□□ 0.51
HOXC6-202ENST00000394331 NLRP8Q86W28 1048 aa18.22■□□□□ 0.51
HOXC6-202ENST00000394331 RYBPQ8N488 228 aaPredicted RBP18.22■□□□□ 0.51
HOXC6-202ENST00000394331 CHCHD4Q8N4Q1 142 aa18.22■□□□□ 0.51
HOXC6-202ENST00000394331 OR7D4Q8NG98 312 aa18.22■□□□□ 0.51
HOXC6-202ENST00000394331 GIMAP5Q96F15 307 aa18.22■□□□□ 0.51
HOXC6-202ENST00000394331 FAM193BQ96PV7 902 aaPredicted RBP18.22■□□□□ 0.51
HOXC6-202ENST00000394331 MCOLN1Q9GZU1 580 aa18.22■□□□□ 0.51
HOXC6-202ENST00000394331 SCPEP1Q9HB40 452 aa18.22■□□□□ 0.51
HOXC6-202ENST00000394331 CATSPERZQ9NTU4 200 aa18.22■□□□□ 0.51
HOXC6-202ENST00000394331 SLC25A37Q9NYZ2 338 aa18.22■□□□□ 0.51
HOXC6-202ENST00000394331 ABCG2Q9UNQ0 655 aa18.22■□□□□ 0.51
HOXC6-202ENST00000394331 DIMT1Q9UNQ2 313 aaKnown RBP18.22■□□□□ 0.51
HOXC6-202ENST00000394331 WDR47O94967 919 aa18.21■□□□□ 0.51
HOXC6-202ENST00000394331 LGI1O95970 557 aa18.21■□□□□ 0.51
HOXC6-202ENST00000394331 TIAL1Q01085 375 aaKnown RBP eCLIP18.21■□□□□ 0.51
HOXC6-202ENST00000394331 CLLU1OSQ5K130 101 aa18.21■□□□□ 0.51
HOXC6-202ENST00000394331 CLVS2Q5SYC1 327 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms