RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 CMTM7Q96FZ5 175 aa10.19□□□□□ -0.78
CALD1-203ENST00000393118 NEURL2Q9BR09 285 aa10.19□□□□□ -0.78
CALD1-203ENST00000393118 ZSCAN5AQ9BUG6 496 aa10.19□□□□□ -0.78
CALD1-203ENST00000393118 NUAK2Q9H093 628 aa10.19□□□□□ -0.78
CALD1-203ENST00000393118 HEBP1Q9NRV9 189 aa10.19□□□□□ -0.78
CALD1-203ENST00000393118 AASSQ9UDR5 926 aa10.19□□□□□ -0.78
CALD1-203ENST00000393118 CNTRLQ7Z7A1 2325 aa10.19□□□□□ -0.78
CALD1-203ENST00000393118 TNFRSF10AO00220 468 aa10.19□□□□□ -0.78
CALD1-203ENST00000393118 TAPBPO15533 448 aa10.19□□□□□ -0.78
CALD1-203ENST00000393118 MITFO75030 526 aaPredicted RBP10.19□□□□□ -0.78
CALD1-203ENST00000393118 PRKACAP17612 351 aa10.19□□□□□ -0.78
CALD1-203ENST00000393118 DUOXA1Q1HG43 343 aa10.19□□□□□ -0.78
CALD1-203ENST00000393118 IER5LQ5T953 404 aa10.19□□□□□ -0.78
CALD1-203ENST00000393118 CARM1Q86X55 608 aa10.19□□□□□ -0.78
CALD1-203ENST00000393118 FAM86B1Q8N7N1 296 aa10.19□□□□□ -0.78
CALD1-203ENST00000393118 OR9Q1Q8NGQ5 310 aa10.19□□□□□ -0.78
CALD1-203ENST00000393118 EXOSC8Q96B26 276 aaKnown RBP10.19□□□□□ -0.78
CALD1-203ENST00000393118 MTERF3Q96E29 417 aa10.19□□□□□ -0.78
CALD1-203ENST00000393118 ZNF486Q96H40 463 aaPredicted RBP10.19□□□□□ -0.78
CALD1-203ENST00000393118 HSH2DQ96JZ2 352 aa10.19□□□□□ -0.78
CALD1-203ENST00000393118 VPS35Q96QK1 796 aa10.19□□□□□ -0.78
CALD1-203ENST00000393118 BBS4Q96RK4 519 aa10.19□□□□□ -0.78
CALD1-203ENST00000393118 BRINP2Q9C0B6 783 aa10.19□□□□□ -0.78
CALD1-203ENST00000393118 CCDC177Q9NQR7 707 aaPredicted RBP10.19□□□□□ -0.78
CALD1-203ENST00000393118 ABLIM3O94929 683 aa10.19□□□□□ -0.78
CALD1-203ENST00000393118 SLC16A8O95907 504 aa10.19□□□□□ -0.78
CALD1-203ENST00000393118 PRNPP04156 253 aa10.19□□□□□ -0.78
CALD1-203ENST00000393118 KLK1P06870 262 aa10.19□□□□□ -0.78
CALD1-203ENST00000393118 RPS3P23396 243 aaKnown RBP eCLIP10.19□□□□□ -0.78
CALD1-203ENST00000393118 GRK3P35626 688 aa10.19□□□□□ -0.78
CALD1-203ENST00000393118 OR1E2P47887 323 aa10.19□□□□□ -0.78
CALD1-203ENST00000393118 SGCGQ13326 291 aa10.19□□□□□ -0.78
CALD1-203ENST00000393118 ARMCX4Q5H9R4 360 aa10.19□□□□□ -0.78
CALD1-203ENST00000393118 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.19□□□□□ -0.78
CALD1-203ENST00000393118 TNFAIP8L2Q6P589 184 aaPredicted RBP10.19□□□□□ -0.78
CALD1-203ENST00000393118 ERICH5Q6P6B1 374 aa10.19□□□□□ -0.78
CALD1-203ENST00000393118 HSD11B1LQ7Z5J1 315 aa10.19□□□□□ -0.78
CALD1-203ENST00000393118 DSG4Q86SJ6 1040 aa10.19□□□□□ -0.78
CALD1-203ENST00000393118 C17orf64Q86WR6 236 aa10.19□□□□□ -0.78
CALD1-203ENST00000393118 C12orf76Q8N812 135 aaPredicted RBP10.19□□□□□ -0.78
CALD1-203ENST00000393118 OR7G1Q8NGA0 311 aa10.19□□□□□ -0.78
CALD1-203ENST00000393118 POF1BQ8WVV4 589 aa10.19□□□□□ -0.78
CALD1-203ENST00000393118 TRMT2BQ96GJ1 504 aaKnown RBP10.19□□□□□ -0.78
CALD1-203ENST00000393118 ZNF641Q96N77 438 aaPredicted RBP10.19□□□□□ -0.78
CALD1-203ENST00000393118 KCNH6Q9H252 994 aa10.19□□□□□ -0.78
CALD1-203ENST00000393118 MED16Q9Y2X0 877 aa10.19□□□□□ -0.78
CALD1-203ENST00000393118 GPSM3Q9Y4H4 160 aa10.19□□□□□ -0.78
CALD1-203ENST00000393118 SIP14410 1827 aa10.18□□□□□ -0.78
CALD1-203ENST00000393118 E7EQ34 232 aa10.18□□□□□ -0.78
CALD1-203ENST00000393118 B3GALT4O96024 378 aa10.18□□□□□ -0.78
CALD1-203ENST00000393118 VEGFBP49765 207 aa10.18□□□□□ -0.78
CALD1-203ENST00000393118 PRMT2P55345 433 aa10.18□□□□□ -0.78
CALD1-203ENST00000393118 CLDN8P56748 225 aa10.18□□□□□ -0.78
CALD1-203ENST00000393118 HSPB3Q12988 150 aa10.18□□□□□ -0.78
CALD1-203ENST00000393118 GANABQ14697 944 aaKnown RBP10.18□□□□□ -0.78
CALD1-203ENST00000393118 NHSL2Q5HYW2 709 aa10.18□□□□□ -0.78
CALD1-203ENST00000393118 VRK3Q8IV63 474 aa10.18□□□□□ -0.78
CALD1-203ENST00000393118 MAL2Q969L2 176 aa10.18□□□□□ -0.78
CALD1-203ENST00000393118 ABCD2Q9UBJ2 740 aa10.18□□□□□ -0.78
CALD1-203ENST00000393118 ERVW-1Q9UQF0 538 aa10.18□□□□□ -0.78
CALD1-203ENST00000393118 ICMTO60725 284 aa10.18□□□□□ -0.78
CALD1-203ENST00000393118 NOS1APO75052 506 aaPredicted RBP10.18□□□□□ -0.78
CALD1-203ENST00000393118 UGT2B11O75310 529 aa10.18□□□□□ -0.78
CALD1-203ENST00000393118 POP7O75817 140 aaKnown RBP10.18□□□□□ -0.78
CALD1-203ENST00000393118 CYP7B1O75881 506 aa10.18□□□□□ -0.78
CALD1-203ENST00000393118 CCNDBP1O95273 360 aa10.18□□□□□ -0.78
CALD1-203ENST00000393118 SLC35G4P0C7Q5 338 aa10.18□□□□□ -0.78
CALD1-203ENST00000393118 SDC1P18827 310 aa10.18□□□□□ -0.78
CALD1-203ENST00000393118 SYT16Q17RD7 645 aa10.18□□□□□ -0.78
CALD1-203ENST00000393118 FAM214AQ32MH5 1076 aa10.18□□□□□ -0.78
CALD1-203ENST00000393118 XKR7Q5GH72 579 aa10.18□□□□□ -0.78
CALD1-203ENST00000393118 SNAP47Q5SQN1 464 aa10.18□□□□□ -0.78
CALD1-203ENST00000393118 BORAQ6PGQ7 559 aa10.18□□□□□ -0.78
CALD1-203ENST00000393118 CYHR1Q6ZMK1 362 aa10.18□□□□□ -0.78
CALD1-203ENST00000393118 DEF8Q6ZN54 512 aa10.18□□□□□ -0.78
CALD1-203ENST00000393118 PSD4Q8NDX1 1056 aa10.18□□□□□ -0.78
CALD1-203ENST00000393118 CHPT1Q8WUD6 406 aa10.18□□□□□ -0.78
CALD1-203ENST00000393118 STON2Q8WXE9 905 aa10.18□□□□□ -0.78
CALD1-203ENST00000393118 COL26A1Q96A83 441 aa10.18□□□□□ -0.78
CALD1-203ENST00000393118 MAGEB10Q96LZ2 347 aaPredicted RBP10.18□□□□□ -0.78
CALD1-203ENST00000393118 IL17FQ96PD4 163 aa10.18□□□□□ -0.78
CALD1-203ENST00000393118 KCNC2Q96PR1 638 aa10.18□□□□□ -0.78
CALD1-203ENST00000393118 CCM2Q9BSQ5 444 aa10.18□□□□□ -0.78
CALD1-203ENST00000393118 H7C0S8 307 aa10.18□□□□□ -0.78
CALD1-203ENST00000393118 M0QX08 132 aa10.18□□□□□ -0.78
CALD1-203ENST00000393118 LATS1O95835 1130 aa10.18□□□□□ -0.78
CALD1-203ENST00000393118 LAMP1P11279 417 aa10.18□□□□□ -0.78
CALD1-203ENST00000393118 ZNF30P17039 623 aa10.18□□□□□ -0.78
CALD1-203ENST00000393118 POLR2IP36954 125 aaKnown RBP10.18□□□□□ -0.78
CALD1-203ENST00000393118 SLC9A3P48764 834 aa10.18□□□□□ -0.78
CALD1-203ENST00000393118 NUDT6P53370 316 aa10.18□□□□□ -0.78
CALD1-203ENST00000393118 PLA2G16P53816 162 aa10.18□□□□□ -0.78
CALD1-203ENST00000393118 TIAL1Q01085 375 aaKnown RBP eCLIP10.18□□□□□ -0.78
CALD1-203ENST00000393118 DPY19L1Q2PZI1 675 aa10.18□□□□□ -0.78
CALD1-203ENST00000393118 CEP78Q5JTW2 689 aa10.18□□□□□ -0.78
CALD1-203ENST00000393118 C16orf62Q7Z3J2 963 aa10.18□□□□□ -0.78
CALD1-203ENST00000393118 ANKRD13BQ86YJ7 626 aa10.18□□□□□ -0.78
CALD1-203ENST00000393118 TBC1D15Q8TC07 691 aa10.18□□□□□ -0.78
CALD1-203ENST00000393118 GLYATL1Q969I3 302 aa10.18□□□□□ -0.78
CALD1-203ENST00000393118 ZNF583Q96ND8 569 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms