RNA–Protein interactions for RNA: ENST00000390879.1

SNORA48.1-201, Transcript of small nucleolar RNA, H/ACA box 48, humanhuman

BASIC

Gene SNORA48, Length 135 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleolus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA48.1-201ENST00000390879 RTP3Q9BQQ7 232 aa1.76□□□□□ -2.13
SNORA48.1-201ENST00000390879 NEURL2Q9BR09 285 aa1.76□□□□□ -2.13
SNORA48.1-201ENST00000390879 CRACR2AQ9BSW2 395 aa1.76□□□□□ -2.13
SNORA48.1-201ENST00000390879 POLR3CQ9BUI4 534 aaPredicted RBP1.76□□□□□ -2.13
SNORA48.1-201ENST00000390879 PANK2Q9BZ23 570 aa1.76□□□□□ -2.13
SNORA48.1-201ENST00000390879 NACAP1Q9BZK3 213 aa1.76□□□□□ -2.13
SNORA48.1-201ENST00000390879 SEMA4CQ9C0C4 833 aa1.76□□□□□ -2.13
SNORA48.1-201ENST00000390879 WWTR1Q9GZV5 400 aa1.76□□□□□ -2.13
SNORA48.1-201ENST00000390879 TSPYL1Q9H0U9 437 aa1.76□□□□□ -2.13
SNORA48.1-201ENST00000390879 MTIF3Q9H2K0 278 aaKnown RBP1.76□□□□□ -2.13
SNORA48.1-201ENST00000390879 UBQLN3Q9H347 655 aa1.76□□□□□ -2.13
SNORA48.1-201ENST00000390879 DPEP3Q9H4B8 488 aa1.76□□□□□ -2.13
SNORA48.1-201ENST00000390879 ACTL8Q9H568 366 aa1.76□□□□□ -2.13
SNORA48.1-201ENST00000390879 TMEM231Q9H6L2 316 aa1.76□□□□□ -2.13
SNORA48.1-201ENST00000390879 ACTR8Q9H981 624 aa1.76□□□□□ -2.13
SNORA48.1-201ENST00000390879 ROPN1Q9HAT0 212 aaPredicted RBP1.76□□□□□ -2.13
SNORA48.1-201ENST00000390879 YAE1D1Q9NRH1 226 aa1.76□□□□□ -2.13
SNORA48.1-201ENST00000390879 FAM207AQ9NSI2 230 aaPredicted RBP1.76□□□□□ -2.13
SNORA48.1-201ENST00000390879 TMEM30AQ9NV96 361 aa1.76□□□□□ -2.13
SNORA48.1-201ENST00000390879 SDAD1Q9NVU7 687 aaKnown RBP eCLIP1.76□□□□□ -2.13
SNORA48.1-201ENST00000390879 SPHK1Q9NYA1 384 aa1.76□□□□□ -2.13
SNORA48.1-201ENST00000390879 PTGFRNQ9P2B2 879 aa1.76□□□□□ -2.13
SNORA48.1-201ENST00000390879 WNT16Q9UBV4 365 aa1.76□□□□□ -2.13
SNORA48.1-201ENST00000390879 LAMP5Q9UJQ1 280 aa1.76□□□□□ -2.13
SNORA48.1-201ENST00000390879 SLC7A7Q9UM01 511 aa1.76□□□□□ -2.13
SNORA48.1-201ENST00000390879 MYO6Q9UM54 1294 aa1.76□□□□□ -2.13
SNORA48.1-201ENST00000390879 VDAC3Q9Y277 283 aa1.76□□□□□ -2.13
SNORA48.1-201ENST00000390879 KIF3AQ9Y496 699 aa1.76□□□□□ -2.13
SNORA48.1-201ENST00000390879 RIPK3Q9Y572 518 aa1.76□□□□□ -2.13
SNORA48.1-201ENST00000390879 PCDHAC2Q9Y5I4 1007 aa1.76□□□□□ -2.13
SNORA48.1-201ENST00000390879 COLEC10Q9Y6Z7 277 aa1.76□□□□□ -2.13
SNORA48.1-201ENST00000390879 U3KQV3 271 aa1.76□□□□□ -2.13
SNORA48.1-201ENST00000390879 UBE4BO95155 1302 aa1.75□□□□□ -2.13
SNORA48.1-201ENST00000390879 A0A087WZY1 265 aa1.75□□□□□ -2.13
SNORA48.1-201ENST00000390879 CLRN2A0PK11 232 aa1.75□□□□□ -2.13
SNORA48.1-201ENST00000390879 ANTXRLA6NF34 631 aa1.75□□□□□ -2.13
SNORA48.1-201ENST00000390879 HNRNPCL2B2RXH8 293 aa1.75□□□□□ -2.13
SNORA48.1-201ENST00000390879 ZNF587BE7ETH6 402 aa1.75□□□□□ -2.13
SNORA48.1-201ENST00000390879 F8WDY8 70 aa1.75□□□□□ -2.13
SNORA48.1-201ENST00000390879 NPIPA3F8WFD2 350 aa1.75□□□□□ -2.13
SNORA48.1-201ENST00000390879 H3BNX3 289 aa1.75□□□□□ -2.13
SNORA48.1-201ENST00000390879 M0R296 226 aa1.75□□□□□ -2.13
SNORA48.1-201ENST00000390879 E2F3O00716 465 aa1.75□□□□□ -2.13
SNORA48.1-201ENST00000390879 ZNF197O14709 1029 aa1.75□□□□□ -2.13
SNORA48.1-201ENST00000390879 IKBKBO14920 756 aa1.75□□□□□ -2.13
SNORA48.1-201ENST00000390879 ADAM12O43184 909 aa1.75□□□□□ -2.13
SNORA48.1-201ENST00000390879 GRID2O43424 1007 aa1.75□□□□□ -2.13
SNORA48.1-201ENST00000390879 SCO2O43819 266 aa1.75□□□□□ -2.13
SNORA48.1-201ENST00000390879 LRP3O75074 770 aa1.75□□□□□ -2.13
SNORA48.1-201ENST00000390879 FZD7O75084 574 aa1.75□□□□□ -2.13
SNORA48.1-201ENST00000390879 GRAP2O75791 330 aa1.75□□□□□ -2.13
SNORA48.1-201ENST00000390879 SNX4O95219 450 aa1.75□□□□□ -2.13
SNORA48.1-201ENST00000390879 OR6A2O95222 327 aa1.75□□□□□ -2.13
SNORA48.1-201ENST00000390879 PAPSS2O95340 614 aaPredicted RBP1.75□□□□□ -2.13
SNORA48.1-201ENST00000390879 PRSS2P07478 247 aa1.75□□□□□ -2.13
SNORA48.1-201ENST00000390879 CELA2AP08217 269 aa1.75□□□□□ -2.13
SNORA48.1-201ENST00000390879 MMP10P09238 476 aa1.75□□□□□ -2.13
SNORA48.1-201ENST00000390879 CALCBP10092 127 aa1.75□□□□□ -2.13
SNORA48.1-201ENST00000390879 CDH1P12830 882 aa1.75□□□□□ -2.13
SNORA48.1-201ENST00000390879 PAICSP22234 425 aaKnown RBP1.75□□□□□ -2.13
SNORA48.1-201ENST00000390879 LHCGRP22888 699 aa1.75□□□□□ -2.13
SNORA48.1-201ENST00000390879 ELAVL4P26378 380 aaKnown RBP1.75□□□□□ -2.13
SNORA48.1-201ENST00000390879 PSMA5P28066 241 aa1.75□□□□□ -2.13
SNORA48.1-201ENST00000390879 PBLDP30039 288 aaPredicted RBP1.75□□□□□ -2.13
SNORA48.1-201ENST00000390879 CSTF2P33240 577 aaKnown RBP eCLIP1.75□□□□□ -2.13
SNORA48.1-201ENST00000390879 SOX6P35712 828 aa1.75□□□□□ -2.13
SNORA48.1-201ENST00000390879 USP8P40818 1118 aa1.75□□□□□ -2.13
SNORA48.1-201ENST00000390879 CETN2P41208 172 aa1.75□□□□□ -2.13
SNORA48.1-201ENST00000390879 GEMP55040 296 aa1.75□□□□□ -2.13
SNORA48.1-201ENST00000390879 CLDN17P56750 224 aa1.75□□□□□ -2.13
SNORA48.1-201ENST00000390879 ACTR1AP61163 376 aa1.75□□□□□ -2.13
SNORA48.1-201ENST00000390879 HERV-K104P63124 156 aa1.75□□□□□ -2.13
SNORA48.1-201ENST00000390879 RPP38P78345 283 aaKnown RBP1.75□□□□□ -2.13
SNORA48.1-201ENST00000390879 IRX4P78413 519 aa1.75□□□□□ -2.13
SNORA48.1-201ENST00000390879 GABPB1Q06547 395 aaPredicted RBP1.75□□□□□ -2.13
SNORA48.1-201ENST00000390879 Q0VFX4 171 aa1.75□□□□□ -2.13
SNORA48.1-201ENST00000390879 DMP1Q13316 513 aaPredicted RBP1.75□□□□□ -2.13
SNORA48.1-201ENST00000390879 SGCGQ13326 291 aa1.75□□□□□ -2.13
SNORA48.1-201ENST00000390879 KLF9Q13886 244 aaPredicted RBP1.75□□□□□ -2.13
SNORA48.1-201ENST00000390879 TRIM29Q14134 588 aa1.75□□□□□ -2.13
SNORA48.1-201ENST00000390879 BTG3Q14201 252 aaPredicted RBP1.75□□□□□ -2.13
SNORA48.1-201ENST00000390879 NFATC4Q14934 902 aa1.75□□□□□ -2.13
SNORA48.1-201ENST00000390879 OPCMLQ14982 345 aa1.75□□□□□ -2.13
SNORA48.1-201ENST00000390879 HERC3Q15034 1050 aa1.75□□□□□ -2.13
SNORA48.1-201ENST00000390879 TRADDQ15628 312 aa1.75□□□□□ -2.13
SNORA48.1-201ENST00000390879 EZH2Q15910 746 aaKnown RBP1.75□□□□□ -2.13
SNORA48.1-201ENST00000390879 ZC2HC1CQ53FD0 456 aaPredicted RBP1.75□□□□□ -2.13
SNORA48.1-201ENST00000390879 XKR3Q5GH77 459 aa1.75□□□□□ -2.13
SNORA48.1-201ENST00000390879 WBP2NLQ6ICG8 309 aa1.75□□□□□ -2.13
SNORA48.1-201ENST00000390879 OR4C11Q6IEV9 310 aa1.75□□□□□ -2.13
SNORA48.1-201ENST00000390879 FAM122CQ6P4D5 195 aa1.75□□□□□ -2.13
SNORA48.1-201ENST00000390879 ARSKQ6UWY0 536 aa1.75□□□□□ -2.13
SNORA48.1-201ENST00000390879 GPR141Q7Z602 305 aa1.75□□□□□ -2.13
SNORA48.1-201ENST00000390879 ZNF554Q86TJ5 538 aa1.75□□□□□ -2.13
SNORA48.1-201ENST00000390879 TMEM110Q86TL2 294 aa1.75□□□□□ -2.13
SNORA48.1-201ENST00000390879 PIM3Q86V86 326 aa1.75□□□□□ -2.13
SNORA48.1-201ENST00000390879 SATL1Q86VE3 508 aa1.75□□□□□ -2.13
SNORA48.1-201ENST00000390879 SFR1Q86XK3 245 aa1.75□□□□□ -2.13
SNORA48.1-201ENST00000390879 KMT5CQ86Y97 462 aa1.75□□□□□ -2.13
SNORA48.1-201ENST00000390879 ZNF843Q8N446 348 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms