RNA–Protein interactions for RNA: ENST00000383801.6

SEC13-203, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2 BASIC

Gene SEC13, Length 1,479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-203ENST00000383801 TICAM1Q8IUC6 712 aa13.03□□□□□ -0.32
SEC13-203ENST00000383801 LINC01555Q8NAE3 123 aa13.03□□□□□ -0.32
SEC13-203ENST00000383801 ICA1LQ8NDH6 482 aa13.03□□□□□ -0.32
SEC13-203ENST00000383801 OR52E1Q8NGJ3 308 aa13.03□□□□□ -0.32
SEC13-203ENST00000383801 GOT1L1Q8NHS2 421 aaPredicted RBP13.03□□□□□ -0.32
SEC13-203ENST00000383801 CLHC1Q8NHS4 586 aa13.03□□□□□ -0.32
SEC13-203ENST00000383801 NR1H4Q96RI1 486 aaPredicted RBP13.03□□□□□ -0.32
SEC13-203ENST00000383801 MS4A8Q9BY19 250 aa13.03□□□□□ -0.32
SEC13-203ENST00000383801 UGT2B28Q9BY64 529 aa13.03□□□□□ -0.32
SEC13-203ENST00000383801 REXO4Q9GZR2 422 aaKnown RBP13.03□□□□□ -0.32
SEC13-203ENST00000383801 COPS7BQ9H9Q2 264 aaPredicted RBP13.03□□□□□ -0.32
SEC13-203ENST00000383801 LMAN1LQ9HAT1 526 aa13.03□□□□□ -0.32
SEC13-203ENST00000383801 BATF3Q9NR55 127 aa13.03□□□□□ -0.32
SEC13-203ENST00000383801 GPR27Q9NS67 375 aa13.03□□□□□ -0.32
SEC13-203ENST00000383801 NDRG2Q9UN36 371 aaKnown RBP13.03□□□□□ -0.32
SEC13-203ENST00000383801 SNX7Q9UNH6 387 aa13.03□□□□□ -0.32
SEC13-203ENST00000383801 SH2B3Q9UQQ2 575 aa13.03□□□□□ -0.32
SEC13-203ENST00000383801 NEUROG3Q9Y4Z2 214 aa13.03□□□□□ -0.32
SEC13-203ENST00000383801 BRWD1Q9NSI6 2320 aa13.03□□□□□ -0.32
SEC13-203ENST00000383801 TCRBV5S2A0A599 114 aa13.02□□□□□ -0.33
SEC13-203ENST00000383801 FAM221BA6H8Z2 402 aa13.02□□□□□ -0.33
SEC13-203ENST00000383801 GABRR3A8MPY1 467 aa13.02□□□□□ -0.33
SEC13-203ENST00000383801 DFNA5O60443 496 aa13.02□□□□□ -0.33
SEC13-203ENST00000383801 TGFB1P01137 390 aa13.02□□□□□ -0.33
SEC13-203ENST00000383801 RETP07949 1114 aa13.02□□□□□ -0.33
SEC13-203ENST00000383801 ANXA6P08133 673 aa13.02□□□□□ -0.33
SEC13-203ENST00000383801 ABCB1P08183 1280 aaPredicted RBP13.02□□□□□ -0.33
SEC13-203ENST00000383801 F3P13726 295 aa13.02□□□□□ -0.33
SEC13-203ENST00000383801 GPX2P18283 190 aa13.02□□□□□ -0.33
SEC13-203ENST00000383801 ATP6V1B2P21281 511 aa13.02□□□□□ -0.33
SEC13-203ENST00000383801 FASP25445 335 aa13.02□□□□□ -0.33
SEC13-203ENST00000383801 PTPN6P29350 595 aa13.02□□□□□ -0.33
SEC13-203ENST00000383801 CMPK1P30085 196 aa13.02□□□□□ -0.33
SEC13-203ENST00000383801 ERFP50548 548 aa13.02□□□□□ -0.33
SEC13-203ENST00000383801 POLE2P56282 527 aa13.02□□□□□ -0.33
SEC13-203ENST00000383801 WNT3P56703 355 aa13.02□□□□□ -0.33
SEC13-203ENST00000383801 CLDN2P57739 230 aa13.02□□□□□ -0.33
SEC13-203ENST00000383801 CSNK1G2P78368 415 aa13.02□□□□□ -0.33
SEC13-203ENST00000383801 RELAQ04206 551 aa13.02□□□□□ -0.33
SEC13-203ENST00000383801 ILF3Q12906 894 aaKnown RBP eCLIP13.02□□□□□ -0.331e-6■■■□□ 15.7
SEC13-203ENST00000383801 OR4F3Q6IEY1 312 aa13.02□□□□□ -0.33
SEC13-203ENST00000383801 IZUMO2Q6UXV1 221 aa13.02□□□□□ -0.33
SEC13-203ENST00000383801 CYP2R1Q6VVX0 501 aa13.02□□□□□ -0.33
SEC13-203ENST00000383801 Q6ZSR6 202 aa13.02□□□□□ -0.33
SEC13-203ENST00000383801 ARMCX6Q7L4S7 300 aa13.02□□□□□ -0.33
SEC13-203ENST00000383801 ERMP1Q7Z2K6 904 aa13.02□□□□□ -0.33
SEC13-203ENST00000383801 IFNEQ86WN2 208 aa13.02□□□□□ -0.33
SEC13-203ENST00000383801 SPPL2CQ8IUH8 684 aa13.02□□□□□ -0.33
SEC13-203ENST00000383801 PACRGLQ8N7B6 248 aa13.02□□□□□ -0.33
SEC13-203ENST00000383801 SRFBP1Q8NEF9 429 aaKnown RBP13.02□□□□□ -0.33
SEC13-203ENST00000383801 CANT1Q8WVQ1 401 aa13.02□□□□□ -0.33
SEC13-203ENST00000383801 SLCO4A1Q96BD0 722 aa13.02□□□□□ -0.33
SEC13-203ENST00000383801 REXO5Q96IC2 774 aaKnown RBP13.02□□□□□ -0.33
SEC13-203ENST00000383801 PANX1Q96RD7 426 aa13.02□□□□□ -0.33
SEC13-203ENST00000383801 Q9H521 79 aa13.02□□□□□ -0.33
SEC13-203ENST00000383801 PRM3Q9NNZ6 103 aa13.02□□□□□ -0.33
SEC13-203ENST00000383801 PRDM8Q9NQV8 689 aa13.02□□□□□ -0.33
SEC13-203ENST00000383801 SLC25A37Q9NYZ2 338 aa13.02□□□□□ -0.33
SEC13-203ENST00000383801 ZNF282Q9UDV7 671 aaPredicted RBP13.02□□□□□ -0.33
SEC13-203ENST00000383801 EGFL7Q9UHF1 273 aa13.02□□□□□ -0.33
SEC13-203ENST00000383801 ANAPC2Q9UJX6 822 aa13.02□□□□□ -0.33
SEC13-203ENST00000383801 PLAGL1Q9UM63 463 aa13.02□□□□□ -0.33
SEC13-203ENST00000383801 CFAP20Q9Y6A4 193 aaKnown RBP13.02□□□□□ -0.33
SEC13-203ENST00000383801 A0A1W2PPC4 97 aa13.01□□□□□ -0.33
SEC13-203ENST00000383801 H7BY64 318 aa13.01□□□□□ -0.33
SEC13-203ENST00000383801 CAPN5O15484 640 aaPredicted RBP13.01□□□□□ -0.33
SEC13-203ENST00000383801 EPN2O95208 641 aa13.01□□□□□ -0.33
SEC13-203ENST00000383801 RASGRP1O95267 797 aa13.01□□□□□ -0.33
SEC13-203ENST00000383801 IGHV4-34P06331 123 aa13.01□□□□□ -0.33
SEC13-203ENST00000383801 MTPNP58546 118 aa13.01□□□□□ -0.33
SEC13-203ENST00000383801 KIR2DS3Q14952 304 aa13.01□□□□□ -0.33
SEC13-203ENST00000383801 HEPACAMQ14CZ8 416 aa13.01□□□□□ -0.33
SEC13-203ENST00000383801 CYP51A1Q16850 503 aa13.01□□□□□ -0.33
SEC13-203ENST00000383801 TBCELQ5QJ74 424 aa13.01□□□□□ -0.33
SEC13-203ENST00000383801 FAM71E1Q6IPT2 247 aa13.01□□□□□ -0.33
SEC13-203ENST00000383801 PTCRAQ6ISU1 281 aaPredicted RBP13.01□□□□□ -0.33
SEC13-203ENST00000383801 IRGCQ6NXR0 463 aa13.01□□□□□ -0.33
SEC13-203ENST00000383801 AMIGO1Q86WK6 493 aa13.01□□□□□ -0.33
SEC13-203ENST00000383801 MSRB3Q8IXL7 192 aa13.01□□□□□ -0.33
SEC13-203ENST00000383801 RBM12BQ8IXT5 1001 aaKnown RBP13.01□□□□□ -0.33
SEC13-203ENST00000383801 ADGRG5Q8IZF4 528 aa13.01□□□□□ -0.33
SEC13-203ENST00000383801 LILRA2Q8N149 483 aa13.01□□□□□ -0.33
SEC13-203ENST00000383801 RNF175Q8N4F7 328 aa13.01□□□□□ -0.33
SEC13-203ENST00000383801 TRIML2Q8N7C3 387 aa13.01□□□□□ -0.33
SEC13-203ENST00000383801 ANKFN1Q8N957 763 aa13.01□□□□□ -0.33
SEC13-203ENST00000383801 LMNTD1Q8N9Z9 388 aa13.01□□□□□ -0.33
SEC13-203ENST00000383801 ZNF548Q8NEK5 533 aaPredicted RBP13.01□□□□□ -0.33
SEC13-203ENST00000383801 TSTD1Q8NFU3 115 aa13.01□□□□□ -0.33
SEC13-203ENST00000383801 OR10A6Q8NH74 314 aa13.01□□□□□ -0.33
SEC13-203ENST00000383801 GPBAR1Q8TDU6 330 aa13.01□□□□□ -0.33
SEC13-203ENST00000383801 C16orf78Q8WTQ4 265 aa13.01□□□□□ -0.33
SEC13-203ENST00000383801 SNX19Q92543 992 aa13.01□□□□□ -0.33
SEC13-203ENST00000383801 RGMAQ96B86 450 aa13.01□□□□□ -0.33
SEC13-203ENST00000383801 FAM120BQ96EK7 910 aaKnown RBP13.01□□□□□ -0.33
SEC13-203ENST00000383801 TOE1Q96GM8 510 aaKnown RBP13.01□□□□□ -0.33
SEC13-203ENST00000383801 ZNF570Q96NI8 536 aa13.01□□□□□ -0.33
SEC13-203ENST00000383801 PRAP1Q96NZ9 151 aa13.01□□□□□ -0.33
SEC13-203ENST00000383801 PKP2Q99959 881 aa13.01□□□□□ -0.33
SEC13-203ENST00000383801 CPPED1Q9BRF8 314 aaPredicted RBP13.01□□□□□ -0.33
SEC13-203ENST00000383801 EBPLQ9BY08 206 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms