RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 TRIM45Q9H8W5 580 aaPredicted RBP14.48□□□□□ -0.09
CTNS-202ENST00000381870 IMPAD1Q9NX62 359 aa14.48□□□□□ -0.09
CTNS-202ENST00000381870 NUDT4Q9NZJ9 180 aa14.48□□□□□ -0.09
CTNS-202ENST00000381870 NDRG2Q9UN36 371 aaKnown RBP14.48□□□□□ -0.09
CTNS-202ENST00000381870 GJA3Q9Y6H8 435 aa14.48□□□□□ -0.09
CTNS-202ENST00000381870 SMIM30A4D0T7 59 aa14.47□□□□□ -0.09
CTNS-202ENST00000381870 SEC14L5O43304 696 aa14.47□□□□□ -0.09
CTNS-202ENST00000381870 CLEC2LP0C7M8 214 aa14.47□□□□□ -0.09
CTNS-202ENST00000381870 TACR1P25103 407 aa14.47□□□□□ -0.09
CTNS-202ENST00000381870 ARHGAP1Q07960 439 aa14.47□□□□□ -0.09
CTNS-202ENST00000381870 MFSD13AQ14CX5 517 aa14.47□□□□□ -0.09
CTNS-202ENST00000381870 LRRC66Q68CR7 880 aa14.47□□□□□ -0.09
CTNS-202ENST00000381870 ANKS3Q6ZW76 656 aa14.47□□□□□ -0.09
CTNS-202ENST00000381870 SERPINA11Q86U17 422 aa14.47□□□□□ -0.09
CTNS-202ENST00000381870 PTOV1Q86YD1 416 aa14.47□□□□□ -0.09
CTNS-202ENST00000381870 DENND6BQ8NEG7 585 aa14.47□□□□□ -0.09
CTNS-202ENST00000381870 C9orf43Q8TAL5 461 aaPredicted RBP14.47□□□□□ -0.09
CTNS-202ENST00000381870 PCNPQ8WW12 178 aaKnown RBP14.47□□□□□ -0.09
CTNS-202ENST00000381870 DCLRE1CQ96SD1 692 aaKnown RBP14.47□□□□□ -0.09
CTNS-202ENST00000381870 SPATA9Q9BWV2 254 aa14.47□□□□□ -0.09
CTNS-202ENST00000381870 GALNT9Q9HCQ5 603 aa14.47□□□□□ -0.09
CTNS-202ENST00000381870 ELOVL2Q9NXB9 296 aa14.47□□□□□ -0.09
CTNS-202ENST00000381870 H3BUI4 141 aa14.47□□□□□ -0.09
CTNS-202ENST00000381870 SLC28A1O00337 649 aa14.47□□□□□ -0.09
CTNS-202ENST00000381870 BTN3A3O00478 584 aa14.47□□□□□ -0.09
CTNS-202ENST00000381870 ULK1O75385 1050 aa14.47□□□□□ -0.09
CTNS-202ENST00000381870 FGF1P05230 155 aa14.47□□□□□ -0.09
CTNS-202ENST00000381870 ICAM2P13598 275 aa14.47□□□□□ -0.09
CTNS-202ENST00000381870 KCNE1P15382 129 aa14.47□□□□□ -0.09
CTNS-202ENST00000381870 TNFRSF1BP20333 461 aa14.47□□□□□ -0.09
CTNS-202ENST00000381870 AQP1P29972 269 aa14.47□□□□□ -0.09
CTNS-202ENST00000381870 CRYBB2P43320 205 aa14.47□□□□□ -0.09
CTNS-202ENST00000381870 RPS14P62263 151 aaKnown RBP14.47□□□□□ -0.09
CTNS-202ENST00000381870 CTAG1AP78358 180 aa14.47□□□□□ -0.09
CTNS-202ENST00000381870 NFE2L1Q14494 772 aa14.47□□□□□ -0.09
CTNS-202ENST00000381870 ALFQ53S48 1182 aa14.47□□□□□ -0.09
CTNS-202ENST00000381870 TSEN54Q7Z6J9 526 aaKnown RBP14.47□□□□□ -0.09
CTNS-202ENST00000381870 GALNT11Q8NCW6 608 aa14.47□□□□□ -0.09
CTNS-202ENST00000381870 UPRTQ96BW1 309 aa14.47□□□□□ -0.09
CTNS-202ENST00000381870 SMARCD1Q96GM5 515 aa14.47□□□□□ -0.09
CTNS-202ENST00000381870 NLKQ9UBE8 527 aa14.47□□□□□ -0.09
CTNS-202ENST00000381870 PIN4Q9Y237 131 aaKnown RBP14.47□□□□□ -0.09
CTNS-202ENST00000381870 IQCMA0A1B0GVH7 501 aa14.46□□□□□ -0.09
CTNS-202ENST00000381870 TNFRSF11BO00300 401 aa14.46□□□□□ -0.09
CTNS-202ENST00000381870 TSPAN4O14817 238 aa14.46□□□□□ -0.09
CTNS-202ENST00000381870 PDE9AO76083 593 aa14.46□□□□□ -0.09
CTNS-202ENST00000381870 CDRT1O95170 752 aa14.46□□□□□ -0.09
CTNS-202ENST00000381870 SCG5P05408 212 aa14.46□□□□□ -0.09
CTNS-202ENST00000381870 POU2F1P14859 743 aa14.46□□□□□ -0.09
CTNS-202ENST00000381870 ENGP17813 658 aa14.46□□□□□ -0.09
CTNS-202ENST00000381870 IL32P24001 234 aa14.46□□□□□ -0.09
CTNS-202ENST00000381870 MAP2K3P46734 347 aa14.46□□□□□ -0.09
CTNS-202ENST00000381870 PXNP49023 591 aaPredicted RBP14.46□□□□□ -0.09
CTNS-202ENST00000381870 MAN2A2P49641 1150 aa14.46□□□□□ -0.09
CTNS-202ENST00000381870 CRYBA2P53672 197 aa14.46□□□□□ -0.09
CTNS-202ENST00000381870 KCNJ10P78508 379 aa14.46□□□□□ -0.09
CTNS-202ENST00000381870 FOXD4Q12950 439 aaPredicted RBP14.46□□□□□ -0.09
CTNS-202ENST00000381870 PPIGQ13427 754 aaKnown RBP eCLIP14.46□□□□□ -0.09
CTNS-202ENST00000381870 TTLL4Q14679 1199 aa14.46□□□□□ -0.09
CTNS-202ENST00000381870 GDPD1Q8N9F7 314 aa14.46□□□□□ -0.09
CTNS-202ENST00000381870 OR10G2Q8NGC3 310 aa14.46□□□□□ -0.09
CTNS-202ENST00000381870 DNAJB8Q8NHS0 232 aa14.46□□□□□ -0.09
CTNS-202ENST00000381870 DNAJA4Q8WW22 397 aaPredicted RBP14.46□□□□□ -0.09
CTNS-202ENST00000381870 TMEM245Q9H330 911 aa14.46□□□□□ -0.09
CTNS-202ENST00000381870 NLE1Q9NVX2 485 aaPredicted RBP14.46□□□□□ -0.09
CTNS-202ENST00000381870 CLEC2DQ9UHP7 191 aa14.46□□□□□ -0.09
CTNS-202ENST00000381870 PCDHGB3Q9Y5G1 929 aa14.46□□□□□ -0.09
CTNS-202ENST00000381870 ZNF670-ZNF695F2Z2N8 137 aa14.46□□□□□ -0.1
CTNS-202ENST00000381870 CLIC1O00299 241 aa14.46□□□□□ -0.1
CTNS-202ENST00000381870 MYL12BO14950 172 aa14.46□□□□□ -0.1
CTNS-202ENST00000381870 TAPBPO15533 448 aa14.46□□□□□ -0.1
CTNS-202ENST00000381870 TREHO43280 583 aa14.46□□□□□ -0.1
CTNS-202ENST00000381870 PRKACAP17612 351 aa14.46□□□□□ -0.1
CTNS-202ENST00000381870 MYL12AP19105 171 aa14.46□□□□□ -0.1
CTNS-202ENST00000381870 HLA-DPA1P20036 260 aa14.46□□□□□ -0.1
CTNS-202ENST00000381870 ZNF140P52738 457 aaPredicted RBP14.46□□□□□ -0.1
CTNS-202ENST00000381870 PER3P56645 1201 aa14.46□□□□□ -0.1
CTNS-202ENST00000381870 HNRNPA0Q13151 305 aaKnown RBP14.46□□□□□ -0.1
CTNS-202ENST00000381870 MAB21L1Q13394 359 aa14.46□□□□□ -0.1
CTNS-202ENST00000381870 FLYWCH1Q4VC44 716 aa14.46□□□□□ -0.1
CTNS-202ENST00000381870 TIGD4Q8IY51 512 aa14.46□□□□□ -0.1
CTNS-202ENST00000381870 UMODL1-AS1Q8N2C9 162 aa14.46□□□□□ -0.1
CTNS-202ENST00000381870 TEX26Q8N6G2 289 aa14.46□□□□□ -0.1
CTNS-202ENST00000381870 ATP6V1C2Q8NEY4 427 aa14.46□□□□□ -0.1
CTNS-202ENST00000381870 MYLPFQ96A32 169 aa14.46□□□□□ -0.1
CTNS-202ENST00000381870 ZFP42Q96MM3 310 aa14.46□□□□□ -0.1
CTNS-202ENST00000381870 PPIL3Q9H2H8 161 aaKnown RBP14.46□□□□□ -0.1
CTNS-202ENST00000381870 FFAR2O15552 330 aa14.45□□□□□ -0.1
CTNS-202ENST00000381870 GPR39O43194 453 aa14.45□□□□□ -0.1
CTNS-202ENST00000381870 TRIM3O75382 744 aaPredicted RBP14.45□□□□□ -0.1
CTNS-202ENST00000381870 APEX1P27695 318 aaKnown RBP14.45□□□□□ -0.1
CTNS-202ENST00000381870 HTR7P34969 479 aa14.45□□□□□ -0.1
CTNS-202ENST00000381870 CLCN7P51798 805 aa14.45□□□□□ -0.1
CTNS-202ENST00000381870 RAB25P57735 213 aa14.45□□□□□ -0.1
CTNS-202ENST00000381870 RRAS2P62070 204 aaPredicted RBP14.45□□□□□ -0.1
CTNS-202ENST00000381870 POU4F3Q15319 338 aa14.45□□□□□ -0.1
CTNS-202ENST00000381870 LCN1P1Q5VSP4 162 aa14.45□□□□□ -0.1
CTNS-202ENST00000381870 PLAG1Q6DJT9 500 aa14.45□□□□□ -0.1
CTNS-202ENST00000381870 AFTPHQ6ULP2 937 aa14.45□□□□□ -0.1
CTNS-202ENST00000381870 SBSNQ6UWP8 590 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms