RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 NLRC3Q7RTR2 1065 aa11.42□□□□□ -0.58
NPHP4-202ENST00000378161 SPATA5L1Q9BVQ7 753 aa11.42□□□□□ -0.58
NPHP4-202ENST00000378161 FBXL12Q9NXK8 326 aa11.42□□□□□ -0.58
NPHP4-202ENST00000378161 TCAF2A6NFQ2 919 aa11.42□□□□□ -0.58
NPHP4-202ENST00000378161 VPS4BO75351 444 aa11.42□□□□□ -0.58
NPHP4-202ENST00000378161 CDRT1O95170 752 aa11.42□□□□□ -0.58
NPHP4-202ENST00000378161 AKT1P31749 480 aa11.42□□□□□ -0.58
NPHP4-202ENST00000378161 ICAM3P32942 547 aa11.42□□□□□ -0.58
NPHP4-202ENST00000378161 PTPN7P35236 360 aa11.42□□□□□ -0.58
NPHP4-202ENST00000378161 CLCN4P51793 760 aa11.42□□□□□ -0.58
NPHP4-202ENST00000378161 EEFSECP57772 596 aaKnown RBP11.42□□□□□ -0.58
NPHP4-202ENST00000378161 CRADDP78560 199 aa11.42□□□□□ -0.58
NPHP4-202ENST00000378161 ADARB1P78563 741 aaKnown RBP11.42□□□□□ -0.58
NPHP4-202ENST00000378161 ERV3-1Q14264 604 aa11.42□□□□□ -0.58
NPHP4-202ENST00000378161 PEA15Q15121 130 aa11.42□□□□□ -0.58
NPHP4-202ENST00000378161 LY6KQ17RY6 165 aa11.42□□□□□ -0.58
NPHP4-202ENST00000378161 IQCCQ4KMZ1 466 aa11.42□□□□□ -0.58
NPHP4-202ENST00000378161 PAN2Q504Q3 1202 aaKnown RBP11.42□□□□□ -0.58
NPHP4-202ENST00000378161 SYT6Q5T7P8 510 aaPredicted RBP11.42□□□□□ -0.58
NPHP4-202ENST00000378161 TRMT10BQ6PF06 316 aaKnown RBP11.42□□□□□ -0.58
NPHP4-202ENST00000378161 TIFABQ6ZNK6 161 aa11.42□□□□□ -0.58
NPHP4-202ENST00000378161 NAA40Q86UY6 237 aa11.42□□□□□ -0.58
NPHP4-202ENST00000378161 POP5Q969H6 163 aaKnown RBP11.42□□□□□ -0.58
NPHP4-202ENST00000378161 PHF21BQ96EK2 531 aa11.42□□□□□ -0.58
NPHP4-202ENST00000378161 MRPL48Q96GC5 212 aaKnown RBP11.42□□□□□ -0.58
NPHP4-202ENST00000378161 SPATC1LQ9H0A9 340 aa11.42□□□□□ -0.58
NPHP4-202ENST00000378161 CDT1Q9H211 546 aa11.42□□□□□ -0.58
NPHP4-202ENST00000378161 DUSP22Q9NRW4 184 aa11.42□□□□□ -0.58
NPHP4-202ENST00000378161 DZANK1Q9NVP4 752 aa11.42□□□□□ -0.58
NPHP4-202ENST00000378161 MFSD2BA6NFX1 497 aa11.42□□□□□ -0.58
NPHP4-202ENST00000378161 SLC9B1P1A6NJY1 282 aa11.42□□□□□ -0.58
NPHP4-202ENST00000378161 SLC43A1O75387 559 aa11.42□□□□□ -0.58
NPHP4-202ENST00000378161 GSRP00390 522 aa11.42□□□□□ -0.58
NPHP4-202ENST00000378161 PRKCGP05129 697 aa11.42□□□□□ -0.58
NPHP4-202ENST00000378161 ATP5F1P24539 256 aaPredicted RBP11.42□□□□□ -0.58
NPHP4-202ENST00000378161 TSPAN7P41732 249 aa11.42□□□□□ -0.58
NPHP4-202ENST00000378161 CDC42P60953 191 aa11.42□□□□□ -0.58
NPHP4-202ENST00000378161 PPP1R8Q12972 351 aaKnown RBP11.42□□□□□ -0.58
NPHP4-202ENST00000378161 FCN2Q15485 313 aa11.42□□□□□ -0.58
NPHP4-202ENST00000378161 EIF2S3LQ2VIR3 472 aaKnown RBP11.42□□□□□ -0.58
NPHP4-202ENST00000378161 ABHD15Q6UXT9 468 aa11.42□□□□□ -0.58
NPHP4-202ENST00000378161 UNC93AQ86WB7 457 aa11.42□□□□□ -0.58
NPHP4-202ENST00000378161 PSTKQ8IV42 348 aaKnown RBP11.42□□□□□ -0.58
NPHP4-202ENST00000378161 ENTHD1Q8IYW4 607 aa11.42□□□□□ -0.58
NPHP4-202ENST00000378161 GPR151Q8TDV0 419 aa11.42□□□□□ -0.58
NPHP4-202ENST00000378161 PDXPQ96GD0 296 aa11.42□□□□□ -0.58
NPHP4-202ENST00000378161 TRMT2BQ96GJ1 504 aaKnown RBP11.42□□□□□ -0.58
NPHP4-202ENST00000378161 MEGF10Q96KG7 1140 aa11.42□□□□□ -0.58
NPHP4-202ENST00000378161 LGMNQ99538 433 aa11.42□□□□□ -0.58
NPHP4-202ENST00000378161 SLC38A3Q99624 504 aa11.42□□□□□ -0.58
NPHP4-202ENST00000378161 C11orf49Q9H6J7 331 aa11.42□□□□□ -0.58
NPHP4-202ENST00000378161 C3orf14Q9HBI5 128 aa11.42□□□□□ -0.58
NPHP4-202ENST00000378161 COMMD9Q9P000 198 aa11.42□□□□□ -0.58
NPHP4-202ENST00000378161 SLC6A5Q9Y345 797 aa11.42□□□□□ -0.58
NPHP4-202ENST00000378161 LAMB4A4D0S4 1761 aa11.41□□□□□ -0.58
NPHP4-202ENST00000378161 BEST1O76090 585 aa11.41□□□□□ -0.58
NPHP4-202ENST00000378161 CST3P01034 146 aaPredicted RBP11.41□□□□□ -0.58
NPHP4-202ENST00000378161 PSMB4P28070 264 aa11.41□□□□□ -0.58
NPHP4-202ENST00000378161 GDI1P31150 447 aa11.41□□□□□ -0.58
NPHP4-202ENST00000378161 VSX2P58304 361 aaPredicted RBP11.41□□□□□ -0.58
NPHP4-202ENST00000378161 GRIN2CQ14957 1233 aa11.41□□□□□ -0.58
NPHP4-202ENST00000378161 GPR33Q49SQ1 333 aa11.41□□□□□ -0.58
NPHP4-202ENST00000378161 BLOC1S3Q6QNY0 202 aa11.41□□□□□ -0.58
NPHP4-202ENST00000378161 ALKAL2Q6UX46 152 aa11.41□□□□□ -0.58
NPHP4-202ENST00000378161 LMO3Q8TAP4 145 aa11.41□□□□□ -0.58
NPHP4-202ENST00000378161 BARD1Q99728 777 aaKnown RBP11.41□□□□□ -0.58
NPHP4-202ENST00000378161 IL22Q9GZX6 179 aa11.41□□□□□ -0.58
NPHP4-202ENST00000378161 ACOT13Q9NPJ3 140 aa11.41□□□□□ -0.58
NPHP4-202ENST00000378161 RBFOX1Q9NWB1 397 aaKnown RBP11.41□□□□□ -0.58
NPHP4-202ENST00000378161 UBP1Q9NZI7 540 aa11.41□□□□□ -0.58
NPHP4-202ENST00000378161 KLK14Q9P0G3 267 aa11.41□□□□□ -0.58
NPHP4-202ENST00000378161 OSGIN1Q9UJX0 560 aa11.41□□□□□ -0.58
NPHP4-202ENST00000378161 FBXL2Q9UKC9 423 aa11.41□□□□□ -0.58
NPHP4-202ENST00000378161 LILRB5O75023 590 aa11.41□□□□□ -0.58
NPHP4-202ENST00000378161 HOXB3P14651 431 aaPredicted RBP11.41□□□□□ -0.58
NPHP4-202ENST00000378161 HK1P19367 917 aa11.41□□□□□ -0.58
NPHP4-202ENST00000378161 TPSB2P20231 275 aa11.41□□□□□ -0.58
NPHP4-202ENST00000378161 GRK5P34947 590 aa11.41□□□□□ -0.58
NPHP4-202ENST00000378161 DPP6P42658 865 aa11.41□□□□□ -0.58
NPHP4-202ENST00000378161 SLC1A3P43003 542 aa11.41□□□□□ -0.58
NPHP4-202ENST00000378161 ADIGQ0VDE8 80 aa11.41□□□□□ -0.58
NPHP4-202ENST00000378161 ASAH1Q13510 395 aa11.41□□□□□ -0.58
NPHP4-202ENST00000378161 PWP1Q13610 501 aa11.41□□□□□ -0.58
NPHP4-202ENST00000378161 TPSAB1Q15661 275 aa11.41□□□□□ -0.58
NPHP4-202ENST00000378161 TMEM88Q6PEY1 159 aa11.41□□□□□ -0.58
NPHP4-202ENST00000378161 SLC16A12Q6ZSM3 486 aa11.41□□□□□ -0.58
NPHP4-202ENST00000378161 LHFPL3Q86UP9 236 aa11.41□□□□□ -0.58
NPHP4-202ENST00000378161 FBXO16Q8IX29 292 aaPredicted RBP11.41□□□□□ -0.58
NPHP4-202ENST00000378161 OR2T12Q8NG77 320 aa11.41□□□□□ -0.58
NPHP4-202ENST00000378161 MAPK15Q8TD08 544 aa11.41□□□□□ -0.58
NPHP4-202ENST00000378161 TRAPPC12Q8WVT3 735 aa11.41□□□□□ -0.58
NPHP4-202ENST00000378161 NXPE3Q969Y0 559 aa11.41□□□□□ -0.58
NPHP4-202ENST00000378161 LRRC58Q96CX6 371 aa11.41□□□□□ -0.58
NPHP4-202ENST00000378161 UHRF1Q96T88 793 aaPredicted RBP11.41□□□□□ -0.58
NPHP4-202ENST00000378161 PRKD2Q9BZL6 878 aa11.41□□□□□ -0.58
NPHP4-202ENST00000378161 FN3KQ9H479 309 aa11.41□□□□□ -0.58
NPHP4-202ENST00000378161 EMC7Q9NPA0 242 aa11.41□□□□□ -0.58
NPHP4-202ENST00000378161 TMEM138Q9NPI0 162 aa11.41□□□□□ -0.58
NPHP4-202ENST00000378161 SCML1Q9UN30 329 aa11.41□□□□□ -0.58
NPHP4-202ENST00000378161 STUB1Q9UNE7 303 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms