RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 RPS3P23396 243 aaKnown RBP eCLIP15.93■□□□□ 0.14
TRIM39-201ENST00000376656 TGM4P49221 684 aa15.93■□□□□ 0.14
TRIM39-201ENST00000376656 ARPP19P56211 112 aa15.93■□□□□ 0.14
TRIM39-201ENST00000376656 FOXD4Q12950 439 aaPredicted RBP15.93■□□□□ 0.14
TRIM39-201ENST00000376656 VEZF1Q14119 521 aa15.93■□□□□ 0.14
TRIM39-201ENST00000376656 GDF6Q6KF10 455 aaPredicted RBP15.93■□□□□ 0.14
TRIM39-201ENST00000376656 MSANTD1Q6ZTZ1 278 aa15.93■□□□□ 0.14
TRIM39-201ENST00000376656 ZNF280BQ86YH2 543 aa15.93■□□□□ 0.14
TRIM39-201ENST00000376656 SYT12Q8IV01 421 aa15.93■□□□□ 0.14
TRIM39-201ENST00000376656 LAX1Q8IWV1 398 aa15.93■□□□□ 0.14
TRIM39-201ENST00000376656 DENND6BQ8NEG7 585 aa15.93■□□□□ 0.14
TRIM39-201ENST00000376656 ASPNQ9BXN1 380 aa15.93■□□□□ 0.14
TRIM39-201ENST00000376656 SLC32A1Q9H598 525 aa15.93■□□□□ 0.14
TRIM39-201ENST00000376656 FZD4Q9ULV1 537 aa15.93■□□□□ 0.14
TRIM39-201ENST00000376656 PADI2Q9Y2J8 665 aa15.93■□□□□ 0.14
TRIM39-201ENST00000376656 ERVH48-1M5A8F1 160 aa15.93■□□□□ 0.14
TRIM39-201ENST00000376656 ACSL4O60488 711 aa15.93■□□□□ 0.14
TRIM39-201ENST00000376656 ARHGEF15O94989 841 aa15.93■□□□□ 0.14
TRIM39-201ENST00000376656 COX7A2P14406 83 aa15.93■□□□□ 0.14
TRIM39-201ENST00000376656 MAPK1P28482 360 aa15.93■□□□□ 0.14
TRIM39-201ENST00000376656 OR1E2P47887 323 aa15.93■□□□□ 0.14
TRIM39-201ENST00000376656 SMARCB1Q12824 385 aa15.93■□□□□ 0.14
TRIM39-201ENST00000376656 SF1Q15637 639 aaKnown RBP15.93■□□□□ 0.14
TRIM39-201ENST00000376656 NFE2Q16621 373 aaPredicted RBP15.93■□□□□ 0.14
TRIM39-201ENST00000376656 FAM214AQ32MH5 1076 aa15.93■□□□□ 0.14
TRIM39-201ENST00000376656 LYPD8Q6UX82 237 aa15.93■□□□□ 0.14
TRIM39-201ENST00000376656 ZNF598Q86UK7 904 aaKnown RBP15.93■□□□□ 0.14
TRIM39-201ENST00000376656 NOXA1Q86UR1 476 aa15.93■□□□□ 0.14
TRIM39-201ENST00000376656 ADGRG2Q8IZP9 1017 aa15.93■□□□□ 0.14
TRIM39-201ENST00000376656 FAM9CQ8IZT9 166 aa15.93■□□□□ 0.14
TRIM39-201ENST00000376656 OR9Q2Q8NGE9 314 aa15.93■□□□□ 0.14
TRIM39-201ENST00000376656 UROC1Q96N76 676 aa15.93■□□□□ 0.14
TRIM39-201ENST00000376656 BBS2Q9BXC9 721 aa15.93■□□□□ 0.14
TRIM39-201ENST00000376656 TRIM39Q9HCM9 518 aa15.93■□□□□ 0.14
TRIM39-201ENST00000376656 ASAH2Q9NR71 780 aa15.93■□□□□ 0.14
TRIM39-201ENST00000376656 ARL15Q9NXU5 204 aa15.93■□□□□ 0.14
TRIM39-201ENST00000376656 NOD1Q9Y239 953 aa15.93■□□□□ 0.14
TRIM39-201ENST00000376656 KLHL20Q9Y2M5 609 aa15.93■□□□□ 0.14
TRIM39-201ENST00000376656 A0A0U1RQF3 1178 aa15.92■□□□□ 0.14
TRIM39-201ENST00000376656 A0A1W2PQ09 198 aa15.92■□□□□ 0.14
TRIM39-201ENST00000376656 MYADML2A6NDP7 307 aa15.92■□□□□ 0.14
TRIM39-201ENST00000376656 GCM2O75603 506 aaPredicted RBP15.92■□□□□ 0.14
TRIM39-201ENST00000376656 IL7P13232 177 aa15.92■□□□□ 0.14
TRIM39-201ENST00000376656 HMGCLP35914 325 aa15.92■□□□□ 0.14
TRIM39-201ENST00000376656 CDH4P55283 916 aa15.92■□□□□ 0.14
TRIM39-201ENST00000376656 CDH12P55289 794 aa15.92■□□□□ 0.14
TRIM39-201ENST00000376656 EXOC3L2Q2M3D2 409 aa15.92■□□□□ 0.14
TRIM39-201ENST00000376656 TIMM50Q3ZCQ8 353 aa15.92■□□□□ 0.14
TRIM39-201ENST00000376656 C5orf22Q49AR2 442 aa15.92■□□□□ 0.14
TRIM39-201ENST00000376656 YIF1BQ5BJH7 314 aa15.92■□□□□ 0.14
TRIM39-201ENST00000376656 NCEH1Q6PIU2 408 aa15.92■□□□□ 0.14
TRIM39-201ENST00000376656 LGI4Q8N135 537 aa15.92■□□□□ 0.14
TRIM39-201ENST00000376656 DEPDC4Q8N2C3 294 aa15.92■□□□□ 0.14
TRIM39-201ENST00000376656 CADM2Q8N3J6 435 aa15.92■□□□□ 0.14
TRIM39-201ENST00000376656 WDR36Q8NI36 951 aaKnown RBP15.92■□□□□ 0.14
TRIM39-201ENST00000376656 ADAM2Q99965 735 aa15.92■□□□□ 0.14
TRIM39-201ENST00000376656 DOHHQ9BU89 302 aa15.92■□□□□ 0.14
TRIM39-201ENST00000376656 SLA2Q9H6Q3 261 aa15.92■□□□□ 0.14
TRIM39-201ENST00000376656 C3orf14Q9HBI5 128 aa15.92■□□□□ 0.14
TRIM39-201ENST00000376656 OGDHLQ9ULD0 1010 aa15.92■□□□□ 0.14
TRIM39-201ENST00000376656 EFCAB10A6NFE3 127 aa15.92■□□□□ 0.14
TRIM39-201ENST00000376656 OAZ2O95190 189 aa15.92■□□□□ 0.14
TRIM39-201ENST00000376656 CD160O95971 181 aa15.92■□□□□ 0.14
TRIM39-201ENST00000376656 ANXA5P08758 320 aa15.92■□□□□ 0.14
TRIM39-201ENST00000376656 ACPPP15309 386 aa15.92■□□□□ 0.14
TRIM39-201ENST00000376656 ABRQ12979 859 aa15.92■□□□□ 0.14
TRIM39-201ENST00000376656 CCL14Q16627 93 aa15.92■□□□□ 0.14
TRIM39-201ENST00000376656 TRIM60Q495X7 471 aa15.92■□□□□ 0.14
TRIM39-201ENST00000376656 TOR1AIP1Q5JTV8 583 aa15.92■□□□□ 0.14
TRIM39-201ENST00000376656 SLC7A6Q92536 515 aa15.92■□□□□ 0.14
TRIM39-201ENST00000376656 SH3KBP1Q96B97 665 aa15.92■□□□□ 0.14
TRIM39-201ENST00000376656 COQ8BQ96D53 544 aa15.92■□□□□ 0.14
TRIM39-201ENST00000376656 RDH14Q9HBH5 336 aa15.92■□□□□ 0.14
TRIM39-201ENST00000376656 ABCB8Q9NUT2 735 aa15.92■□□□□ 0.14
TRIM39-201ENST00000376656 POFUT2Q9Y2G5 429 aa15.92■□□□□ 0.14
TRIM39-201ENST00000376656 CCL15-CCL14A0A0B4J2E2 113 aa15.91■□□□□ 0.14
TRIM39-201ENST00000376656 PRAMEF4O60810 478 aa15.91■□□□□ 0.14
TRIM39-201ENST00000376656 LAMP1P11279 417 aa15.91■□□□□ 0.14
TRIM39-201ENST00000376656 PRPS1L1P21108 318 aa15.91■□□□□ 0.14
TRIM39-201ENST00000376656 CA8P35219 290 aa15.91■□□□□ 0.14
TRIM39-201ENST00000376656 RPIAP49247 311 aa15.91■□□□□ 0.14
TRIM39-201ENST00000376656 CASP9P55211 416 aa15.91■□□□□ 0.14
TRIM39-201ENST00000376656 ARF5P84085 180 aa15.91■□□□□ 0.14
TRIM39-201ENST00000376656 DAB2P98082 770 aa15.91■□□□□ 0.14
TRIM39-201ENST00000376656 SPIBQ01892 262 aa15.91■□□□□ 0.14
TRIM39-201ENST00000376656 CCL15Q16663 113 aa15.91■□□□□ 0.14
TRIM39-201ENST00000376656 PRAMEF9Q5VWM5 478 aa15.91■□□□□ 0.14
TRIM39-201ENST00000376656 TMPRSS11AQ6ZMR5 421 aa15.91■□□□□ 0.14
TRIM39-201ENST00000376656 RFPL4BQ6ZWI9 263 aa15.91■□□□□ 0.14
TRIM39-201ENST00000376656 C16orf59Q7L2K0 433 aa15.91■□□□□ 0.14
TRIM39-201ENST00000376656 RNF130Q86XS8 419 aa15.91■□□□□ 0.14
TRIM39-201ENST00000376656 OR4C15Q8NGM1 316 aa15.91■□□□□ 0.14
TRIM39-201ENST00000376656 JPH3Q8WXH2 748 aaPredicted RBP15.91■□□□□ 0.14
TRIM39-201ENST00000376656 TAPBPLQ9BX59 468 aa15.91■□□□□ 0.14
TRIM39-201ENST00000376656 CDCA4Q9BXL8 241 aa15.91■□□□□ 0.14
TRIM39-201ENST00000376656 IRF2BPLQ9H1B7 796 aa15.91■□□□□ 0.14
TRIM39-201ENST00000376656 DNAJC5Q9H3Z4 198 aa15.91■□□□□ 0.14
TRIM39-201ENST00000376656 PCDHB11Q9Y5F2 797 aa15.91■□□□□ 0.14
TRIM39-201ENST00000376656 EIF3FO00303 357 aaPredicted RBP15.91■□□□□ 0.14
TRIM39-201ENST00000376656 HLA-EP13747 358 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms