RNA–Protein interactions for RNA: ENST00000376387.4

TM9SF2-201, Transcript of transmembrane 9 superfamily member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-201ENST00000376387 H3BM21 787 aa11.11□□□□□ -0.63
TM9SF2-201ENST00000376387 CLIC1O00299 241 aa11.11□□□□□ -0.63
TM9SF2-201ENST00000376387 CAPN5O15484 640 aaPredicted RBP11.11□□□□□ -0.63
TM9SF2-201ENST00000376387 GLAP06280 429 aa11.11□□□□□ -0.63
TM9SF2-201ENST00000376387 CTPS1P17812 591 aa11.11□□□□□ -0.63
TM9SF2-201ENST00000376387 EPORP19235 508 aa11.11□□□□□ -0.63
TM9SF2-201ENST00000376387 CLDN8P56748 225 aa11.11□□□□□ -0.63
TM9SF2-201ENST00000376387 ST3GAL4Q11206 333 aa11.11□□□□□ -0.63
TM9SF2-201ENST00000376387 FAM217AQ8IXS0 508 aa11.11□□□□□ -0.63
TM9SF2-201ENST00000376387 CLECL1Q8IZS7 167 aa11.11□□□□□ -0.63
TM9SF2-201ENST00000376387 KBTBD8Q8NFY9 601 aa11.11□□□□□ -0.63
TM9SF2-201ENST00000376387 FCGR1BQ92637 280 aa11.11□□□□□ -0.63
TM9SF2-201ENST00000376387 ULK4Q96C45 1275 aa11.11□□□□□ -0.63
TM9SF2-201ENST00000376387 TRNT1Q96Q11 434 aaKnown RBP11.11□□□□□ -0.63
TM9SF2-201ENST00000376387 SNX18Q96RF0 628 aa11.11□□□□□ -0.63
TM9SF2-201ENST00000376387 COQ7Q99807 217 aa11.11□□□□□ -0.63
TM9SF2-201ENST00000376387 MARCH2Q9P0N8 246 aa11.11□□□□□ -0.63
TM9SF2-201ENST00000376387 SPASTQ9UBP0 616 aa11.11□□□□□ -0.63
TM9SF2-201ENST00000376387 RAPGEFL1Q9UHV5 662 aa11.11□□□□□ -0.63
TM9SF2-201ENST00000376387 MAU2Q9Y6X3 613 aa11.11□□□□□ -0.63
TM9SF2-201ENST00000376387 A3GALT2U3KPV4 340 aa11.11□□□□□ -0.63
TM9SF2-201ENST00000376387 ANKRD66B4E2M5 251 aa11.11□□□□□ -0.63
TM9SF2-201ENST00000376387 MRPS14O60783 128 aaKnown RBP11.11□□□□□ -0.63
TM9SF2-201ENST00000376387 ESR1P03372 595 aa11.11□□□□□ -0.63
TM9SF2-201ENST00000376387 PPM1FP49593 454 aaPredicted RBP11.11□□□□□ -0.63
TM9SF2-201ENST00000376387 CLCN4P51793 760 aa11.11□□□□□ -0.63
TM9SF2-201ENST00000376387 TSTQ16762 297 aaKnown RBP11.11□□□□□ -0.63
TM9SF2-201ENST00000376387 LRRC66Q68CR7 880 aa11.11□□□□□ -0.63
TM9SF2-201ENST00000376387 ALG1LQ6GMV1 187 aa11.11□□□□□ -0.63
TM9SF2-201ENST00000376387 ERAP2Q6P179 960 aa11.11□□□□□ -0.63
TM9SF2-201ENST00000376387 FAM151BQ6UXP7 276 aa11.11□□□□□ -0.63
TM9SF2-201ENST00000376387 LINGO4Q6UY18 593 aa11.11□□□□□ -0.63
TM9SF2-201ENST00000376387 ZNF621Q6ZSS3 439 aa11.11□□□□□ -0.63
TM9SF2-201ENST00000376387 USP7Q93009 1102 aa11.11□□□□□ -0.63
TM9SF2-201ENST00000376387 C7orf34Q96L11 122 aa11.11□□□□□ -0.63
TM9SF2-201ENST00000376387 MCCC1Q96RQ3 725 aaPredicted RBP11.11□□□□□ -0.63
TM9SF2-201ENST00000376387 NIPSNAP1Q9BPW8 284 aa11.11□□□□□ -0.63
TM9SF2-201ENST00000376387 RHBGQ9H310 441 aa11.11□□□□□ -0.63
TM9SF2-201ENST00000376387 RANGRFQ9HD47 186 aaPredicted RBP11.11□□□□□ -0.63
TM9SF2-201ENST00000376387 TMEM238LA0A1B0GVL6 79 aa11.1□□□□□ -0.63
TM9SF2-201ENST00000376387 CENPBD1B2RD01 187 aa11.1□□□□□ -0.63
TM9SF2-201ENST00000376387 ERVH48-1M5A8F1 160 aa11.1□□□□□ -0.63
TM9SF2-201ENST00000376387 CPSF4O95639 269 aaKnown RBP11.1□□□□□ -0.63
TM9SF2-201ENST00000376387 C9P02748 559 aa11.1□□□□□ -0.63
TM9SF2-201ENST00000376387 ABCB1P08183 1280 aaPredicted RBP11.1□□□□□ -0.63
TM9SF2-201ENST00000376387 ALPIP09923 528 aa11.1□□□□□ -0.63
TM9SF2-201ENST00000376387 CR2P20023 1033 aa11.1□□□□□ -0.63
TM9SF2-201ENST00000376387 TACR2P21452 398 aa11.1□□□□□ -0.63
TM9SF2-201ENST00000376387 GGT2P36268 569 aa11.1□□□□□ -0.63
TM9SF2-201ENST00000376387 PTGER3P43115 390 aa11.1□□□□□ -0.63
TM9SF2-201ENST00000376387 ITGA1P56199 1179 aa11.1□□□□□ -0.63
TM9SF2-201ENST00000376387 RPS24P62847 133 aaKnown RBP11.1□□□□□ -0.63
TM9SF2-201ENST00000376387 MED22Q15528 200 aa11.1□□□□□ -0.63
TM9SF2-201ENST00000376387 ZXDCQ2QGD7 858 aaPredicted RBP11.1□□□□□ -0.63
TM9SF2-201ENST00000376387 CYP27C1Q4G0S4 372 aa11.1□□□□□ -0.63
TM9SF2-201ENST00000376387 PTRHD1Q6GMV3 140 aaKnown RBP11.1□□□□□ -0.63
TM9SF2-201ENST00000376387 ZNF517Q6ZMY9 492 aaPredicted RBP11.1□□□□□ -0.63
TM9SF2-201ENST00000376387 ZNF467Q7Z7K2 595 aaPredicted RBP11.1□□□□□ -0.63
TM9SF2-201ENST00000376387 LURAP1LQ8IV03 231 aa11.1□□□□□ -0.63
TM9SF2-201ENST00000376387 SLC5A8Q8N695 610 aa11.1□□□□□ -0.63
TM9SF2-201ENST00000376387 TP53I13Q8NBR0 393 aaPredicted RBP11.1□□□□□ -0.63
TM9SF2-201ENST00000376387 ATAD1Q8NBU5 361 aa11.1□□□□□ -0.63
TM9SF2-201ENST00000376387 VANGL1Q8TAA9 524 aaPredicted RBP11.1□□□□□ -0.63
TM9SF2-201ENST00000376387 GPR151Q8TDV0 419 aa11.1□□□□□ -0.63
TM9SF2-201ENST00000376387 MYDGFQ969H8 173 aa11.1□□□□□ -0.63
TM9SF2-201ENST00000376387 RNF170Q96K19 258 aa11.1□□□□□ -0.63
TM9SF2-201ENST00000376387 GDF15Q99988 308 aa11.1□□□□□ -0.63
TM9SF2-201ENST00000376387 GABARAPL3Q9BY60 117 aa11.1□□□□□ -0.63
TM9SF2-201ENST00000376387 PRRG3Q9BZD7 231 aa11.1□□□□□ -0.63
TM9SF2-201ENST00000376387 BARHL1Q9BZE3 327 aa11.1□□□□□ -0.63
TM9SF2-201ENST00000376387 TRIM39Q9HCM9 518 aa11.1□□□□□ -0.63
TM9SF2-201ENST00000376387 TRPS1Q9UHF7 1281 aa11.1□□□□□ -0.63
TM9SF2-201ENST00000376387 BTBD3Q9Y2F9 522 aa11.1□□□□□ -0.63
TM9SF2-201ENST00000376387 PCM1Q15154 2024 aa11.1□□□□□ -0.63
TM9SF2-201ENST00000376387 DOCK3Q8IZD9 2030 aa11.1□□□□□ -0.63
TM9SF2-201ENST00000376387 GOLGA8CPA6NN73 597 aa11.1□□□□□ -0.63
TM9SF2-201ENST00000376387 TMEM229AB2RXF0 380 aa11.1□□□□□ -0.63
TM9SF2-201ENST00000376387 PDHXO00330 501 aa11.1□□□□□ -0.63
TM9SF2-201ENST00000376387 FPGTO14772 594 aa11.1□□□□□ -0.63
TM9SF2-201ENST00000376387 GPX5O75715 221 aa11.1□□□□□ -0.63
TM9SF2-201ENST00000376387 ACPPP15309 386 aa11.1□□□□□ -0.63
TM9SF2-201ENST00000376387 SGSHP51688 502 aa11.1□□□□□ -0.63
TM9SF2-201ENST00000376387 KCNJ10P78508 379 aa11.1□□□□□ -0.63
TM9SF2-201ENST00000376387 PTCHD3Q3KNS1 767 aa11.1□□□□□ -0.63
TM9SF2-201ENST00000376387 CBLL1Q75N03 491 aa11.1□□□□□ -0.63
TM9SF2-201ENST00000376387 SERPINA11Q86U17 422 aa11.1□□□□□ -0.63
TM9SF2-201ENST00000376387 CADM2Q8N3J6 435 aa11.1□□□□□ -0.63
TM9SF2-201ENST00000376387 STX19Q8N4C7 294 aa11.1□□□□□ -0.63
TM9SF2-201ENST00000376387 APOLD1Q96LR9 279 aa11.1□□□□□ -0.63
TM9SF2-201ENST00000376387 PANX1Q96RD7 426 aa11.1□□□□□ -0.63
TM9SF2-201ENST00000376387 SLC30A2Q9BRI3 323 aa11.1□□□□□ -0.63
TM9SF2-201ENST00000376387 SYT17Q9BSW7 474 aa11.1□□□□□ -0.63
TM9SF2-201ENST00000376387 FLRT1Q9NZU1 646 aa11.1□□□□□ -0.63
TM9SF2-201ENST00000376387 LUZP4Q9P127 313 aa11.1□□□□□ -0.63
TM9SF2-201ENST00000376387 UBA2Q9UBT2 640 aaPredicted RBP11.1□□□□□ -0.63
TM9SF2-201ENST00000376387 MKLN1Q9UL63 735 aa11.1□□□□□ -0.63
TM9SF2-201ENST00000376387 OARD1Q9Y530 152 aa11.1□□□□□ -0.63
TM9SF2-201ENST00000376387 PCDHGA2Q9Y5H1 932 aa11.1□□□□□ -0.63
TM9SF2-201ENST00000376387 PIKFYVEQ9Y2I7 2098 aa11.1□□□□□ -0.63
TM9SF2-201ENST00000376387 SCAMP3O14828 347 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms