RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 EXOSC4Q9NPD3 245 aaKnown RBP14.3□□□□□ -0.12
COL9A2-202ENST00000372748 TMEM161AQ9NX61 479 aa14.3□□□□□ -0.12
COL9A2-202ENST00000372748 MS4A12Q9NXJ0 267 aa14.3□□□□□ -0.12
COL9A2-202ENST00000372748 ARL15Q9NXU5 204 aa14.3□□□□□ -0.12
COL9A2-202ENST00000372748 MUTYHQ9UIF7 546 aa14.3□□□□□ -0.12
COL9A2-202ENST00000372748 LAMA3Q16787 3333 aa14.3□□□□□ -0.12
COL9A2-202ENST00000372748 FRMPD3Q5JV73 1810 aa14.3□□□□□ -0.12
COL9A2-202ENST00000372748 H3BM21 787 aa14.29□□□□□ -0.12
COL9A2-202ENST00000372748 YY2O15391 372 aa14.29□□□□□ -0.12
COL9A2-202ENST00000372748 AOC2O75106 756 aa14.29□□□□□ -0.12
COL9A2-202ENST00000372748 TNFSF8P32971 234 aa14.29□□□□□ -0.12
COL9A2-202ENST00000372748 CSNK2BP67870 215 aa14.29□□□□□ -0.12
COL9A2-202ENST00000372748 KCNJ10P78508 379 aa14.29□□□□□ -0.12
COL9A2-202ENST00000372748 SEMG2Q02383 582 aa14.29□□□□□ -0.12
COL9A2-202ENST00000372748 SLAMF1Q13291 335 aa14.29□□□□□ -0.12
COL9A2-202ENST00000372748 DUOXA1Q1HG43 343 aa14.29□□□□□ -0.12
COL9A2-202ENST00000372748 ZXDCQ2QGD7 858 aaPredicted RBP14.29□□□□□ -0.12
COL9A2-202ENST00000372748 FAM214AQ32MH5 1076 aa14.29□□□□□ -0.12
COL9A2-202ENST00000372748 TBRG1Q3YBR2 411 aa14.29□□□□□ -0.12
COL9A2-202ENST00000372748 LRRC66Q68CR7 880 aa14.29□□□□□ -0.12
COL9A2-202ENST00000372748 ZNF517Q6ZMY9 492 aaPredicted RBP14.29□□□□□ -0.12
COL9A2-202ENST00000372748 FAM217AQ8IXS0 508 aa14.29□□□□□ -0.12
COL9A2-202ENST00000372748 SKA2Q8WVK7 121 aaPredicted RBP14.29□□□□□ -0.12
COL9A2-202ENST00000372748 DHRS1Q96LJ7 313 aa14.29□□□□□ -0.12
COL9A2-202ENST00000372748 COL21A1Q96P44 957 aa14.29□□□□□ -0.12
COL9A2-202ENST00000372748 ZNF226Q9NYT6 803 aa14.29□□□□□ -0.12
COL9A2-202ENST00000372748 ZNF840PA6NDX5 716 aa14.29□□□□□ -0.12
COL9A2-202ENST00000372748 H7C0S8 307 aa14.29□□□□□ -0.12
COL9A2-202ENST00000372748 K7ERQ8 282 aa14.29□□□□□ -0.12
COL9A2-202ENST00000372748 TNFRSF11BO00300 401 aa14.29□□□□□ -0.12
COL9A2-202ENST00000372748 SLC10A3P09131 477 aa14.29□□□□□ -0.12
COL9A2-202ENST00000372748 PRPS2P11908 318 aa14.29□□□□□ -0.12
COL9A2-202ENST00000372748 OR1D2P34982 312 aa14.29□□□□□ -0.12
COL9A2-202ENST00000372748 TGM4P49221 684 aa14.29□□□□□ -0.12
COL9A2-202ENST00000372748 DAB2P98082 770 aa14.29□□□□□ -0.12
COL9A2-202ENST00000372748 MADCAM1Q13477 382 aa14.29□□□□□ -0.12
COL9A2-202ENST00000372748 ARMC4Q5T2S8 1044 aa14.29□□□□□ -0.12
COL9A2-202ENST00000372748 FBXO22Q8NEZ5 403 aa14.29□□□□□ -0.12
COL9A2-202ENST00000372748 CHAC2Q8WUX2 184 aa14.29□□□□□ -0.12
COL9A2-202ENST00000372748 TESCQ96BS2 214 aa14.29□□□□□ -0.12
COL9A2-202ENST00000372748 CASD1Q96PB1 797 aa14.29□□□□□ -0.12
COL9A2-202ENST00000372748 SNX18Q96RF0 628 aa14.29□□□□□ -0.12
COL9A2-202ENST00000372748 CCM2Q9BSQ5 444 aa14.29□□□□□ -0.12
COL9A2-202ENST00000372748 MMP28Q9H239 520 aa14.29□□□□□ -0.12
COL9A2-202ENST00000372748 C2orf78A6NCI8 922 aa14.28□□□□□ -0.12
COL9A2-202ENST00000372748 SUV39H1O43463 412 aa14.28□□□□□ -0.12
COL9A2-202ENST00000372748 SCO2O43819 266 aa14.28□□□□□ -0.12
COL9A2-202ENST00000372748 ABCB1P08183 1280 aaPredicted RBP14.28□□□□□ -0.12
COL9A2-202ENST00000372748 PRKCAP17252 672 aa14.28□□□□□ -0.12
COL9A2-202ENST00000372748 GPX2P18283 190 aa14.28□□□□□ -0.12
COL9A2-202ENST00000372748 GKP32189 559 aa14.28□□□□□ -0.12
COL9A2-202ENST00000372748 NKX3-2P78367 333 aa14.28□□□□□ -0.12
COL9A2-202ENST00000372748 STARD3Q14849 445 aa14.28□□□□□ -0.12
COL9A2-202ENST00000372748 CDK10Q15131 360 aa14.28□□□□□ -0.12
COL9A2-202ENST00000372748 CCDC58Q4VC31 144 aa14.28□□□□□ -0.12
COL9A2-202ENST00000372748 HECTD3Q5T447 861 aa14.28□□□□□ -0.12
COL9A2-202ENST00000372748 CXorf57Q6NSI4 855 aaKnown RBP14.28□□□□□ -0.12
COL9A2-202ENST00000372748 RNF180Q86T96 592 aa14.28□□□□□ -0.12
COL9A2-202ENST00000372748 SYT12Q8IV01 421 aa14.28□□□□□ -0.12
COL9A2-202ENST00000372748 B3GNT7Q8NFL0 401 aa14.28□□□□□ -0.12
COL9A2-202ENST00000372748 VANGL1Q8TAA9 524 aaPredicted RBP14.28□□□□□ -0.12
COL9A2-202ENST00000372748 POP5Q969H6 163 aaKnown RBP14.28□□□□□ -0.12
COL9A2-202ENST00000372748 OGDHLQ9ULD0 1010 aa14.28□□□□□ -0.12
COL9A2-202ENST00000372748 PCDHGB3Q9Y5G1 929 aa14.28□□□□□ -0.12
COL9A2-202ENST00000372748 COX7A2P14406 83 aa14.28□□□□□ -0.12
COL9A2-202ENST00000372748 ACPPP15309 386 aa14.28□□□□□ -0.12
COL9A2-202ENST00000372748 RFX2P48378 723 aa14.28□□□□□ -0.12
COL9A2-202ENST00000372748 RPIAP49247 311 aa14.28□□□□□ -0.12
COL9A2-202ENST00000372748 SMARCB1Q12824 385 aa14.28□□□□□ -0.12
COL9A2-202ENST00000372748 PPIGQ13427 754 aaKnown RBP eCLIP14.28□□□□□ -0.126e-10■■■□□ 16.8
COL9A2-202ENST00000372748 GPR50Q13585 617 aa14.28□□□□□ -0.12
COL9A2-202ENST00000372748 UGT8Q16880 541 aa14.28□□□□□ -0.12
COL9A2-202ENST00000372748 NOXRED1Q6NXP6 359 aa14.28□□□□□ -0.12
COL9A2-202ENST00000372748 ANGPTL8Q6UXH0 198 aa14.28□□□□□ -0.12
COL9A2-202ENST00000372748 TSEN54Q7Z6J9 526 aaKnown RBP14.28□□□□□ -0.12
COL9A2-202ENST00000372748 OR10G2Q8NGC3 310 aa14.28□□□□□ -0.12
COL9A2-202ENST00000372748 PHOX2BQ99453 314 aa14.28□□□□□ -0.12
COL9A2-202ENST00000372748 MGLLQ99685 303 aa14.28□□□□□ -0.12
COL9A2-202ENST00000372748 CNPPD1Q9BV87 410 aa14.28□□□□□ -0.12
COL9A2-202ENST00000372748 BBS2Q9BXC9 721 aa14.28□□□□□ -0.12
COL9A2-202ENST00000372748 TPT1P8Q9HAU6 139 aa14.28□□□□□ -0.12
COL9A2-202ENST00000372748 PRM3Q9NNZ6 103 aa14.28□□□□□ -0.12
COL9A2-202ENST00000372748 PLCXD1Q9NUJ7 323 aa14.28□□□□□ -0.12
COL9A2-202ENST00000372748 IMPAD1Q9NX62 359 aa14.28□□□□□ -0.12
COL9A2-202ENST00000372748 RNF186Q9NXI6 227 aa14.28□□□□□ -0.12
COL9A2-202ENST00000372748 TET1Q8NFU7 2136 aa14.28□□□□□ -0.12
COL9A2-202ENST00000372748 A0A1B0GVM2 712 aa14.28□□□□□ -0.12
COL9A2-202ENST00000372748 GAPDHSO14556 408 aaPredicted RBP14.28□□□□□ -0.12
COL9A2-202ENST00000372748 SNX4O95219 450 aa14.28□□□□□ -0.12
COL9A2-202ENST00000372748 HMGCLP35914 325 aa14.28□□□□□ -0.12
COL9A2-202ENST00000372748 LIMK1P53667 647 aa14.28□□□□□ -0.12
COL9A2-202ENST00000372748 CDH12P55289 794 aa14.28□□□□□ -0.12
COL9A2-202ENST00000372748 RHOAP61586 193 aa14.28□□□□□ -0.12
COL9A2-202ENST00000372748 DDX39BQ13838 428 aaKnown RBP14.28□□□□□ -0.12
COL9A2-202ENST00000372748 BAK1Q16611 211 aa14.28□□□□□ -0.12
COL9A2-202ENST00000372748 NCEH1Q6PIU2 408 aa14.28□□□□□ -0.12
COL9A2-202ENST00000372748 RBFAQ8N0V3 343 aa14.28□□□□□ -0.12
COL9A2-202ENST00000372748 CHCHD4Q8N4Q1 142 aa14.28□□□□□ -0.12
COL9A2-202ENST00000372748 OR9Q2Q8NGE9 314 aa14.28□□□□□ -0.12
COL9A2-202ENST00000372748 GPR151Q8TDV0 419 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms