RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 SLC2A7Q6PXP3 512 aa14.26□□□□□ -0.13
NDC1-201ENST00000371429 ZSCAN1Q8NBB4 408 aa14.26□□□□□ -0.13
NDC1-201ENST00000371429 WDR60Q8WVS4 1066 aa14.26□□□□□ -0.13
NDC1-201ENST00000371429 FCRL3Q96P31 734 aaPredicted RBP14.26□□□□□ -0.13
NDC1-201ENST00000371429 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.26□□□□□ -0.13
NDC1-201ENST00000371429 RAB6CQ9H0N0 254 aa14.26□□□□□ -0.13
NDC1-201ENST00000371429 PCDHAC1Q9H158 963 aa14.26□□□□□ -0.13
NDC1-201ENST00000371429 ZNF395Q9H8N7 513 aaPredicted RBP14.26□□□□□ -0.13
NDC1-201ENST00000371429 ASNA1O43681 348 aa14.26□□□□□ -0.13
NDC1-201ENST00000371429 PXNP49023 591 aaPredicted RBP14.26□□□□□ -0.13
NDC1-201ENST00000371429 TLR1Q15399 786 aa14.26□□□□□ -0.13
NDC1-201ENST00000371429 LIPJQ5W064 366 aa14.26□□□□□ -0.13
NDC1-201ENST00000371429 TSPAN33Q86UF1 283 aa14.26□□□□□ -0.13
NDC1-201ENST00000371429 GEMIN6Q8WXD5 167 aaKnown RBP14.26□□□□□ -0.13
NDC1-201ENST00000371429 PGAP3Q96FM1 320 aaPredicted RBP14.26□□□□□ -0.13
NDC1-201ENST00000371429 COX4I2Q96KJ9 171 aa14.26□□□□□ -0.13
NDC1-201ENST00000371429 RANBP9Q96S59 729 aa14.26□□□□□ -0.13
NDC1-201ENST00000371429 SLC46A2Q9BY10 475 aa14.26□□□□□ -0.13
NDC1-201ENST00000371429 CADM1Q9BY67 442 aaKnown RBP14.26□□□□□ -0.13
NDC1-201ENST00000371429 TSC22D4Q9Y3Q8 395 aa14.26□□□□□ -0.13
NDC1-201ENST00000371429 SPIN1Q9Y657 262 aaPredicted RBP14.26□□□□□ -0.13
NDC1-201ENST00000371429 APBB3O95704 486 aa14.25□□□□□ -0.13
NDC1-201ENST00000371429 S1PR4O95977 384 aa14.25□□□□□ -0.13
NDC1-201ENST00000371429 PPP2R2BQ00005 443 aa14.25□□□□□ -0.13
NDC1-201ENST00000371429 DSC3Q14574 896 aa14.25□□□□□ -0.13
NDC1-201ENST00000371429 CCDC88AQ3V6T2 1871 aa14.25□□□□□ -0.13
NDC1-201ENST00000371429 FRMD7Q6ZUT3 714 aa14.25□□□□□ -0.13
NDC1-201ENST00000371429 IKBIPQ70UQ0 350 aa14.25□□□□□ -0.13
NDC1-201ENST00000371429 RTL10Q7L3V2 364 aa14.25□□□□□ -0.13
NDC1-201ENST00000371429 ZNF689Q96CS4 500 aaPredicted RBP14.25□□□□□ -0.13
NDC1-201ENST00000371429 PKP4Q99569 1192 aa14.25□□□□□ -0.13
NDC1-201ENST00000371429 COMMD4Q9H0A8 199 aa14.25□□□□□ -0.13
NDC1-201ENST00000371429 FARSBQ9NSD9 589 aaKnown RBP14.25□□□□□ -0.13
NDC1-201ENST00000371429 SLC30A4O14863 429 aa14.25□□□□□ -0.13
NDC1-201ENST00000371429 SHOX2O60902 331 aaPredicted RBP14.25□□□□□ -0.13
NDC1-201ENST00000371429 BPIP17213 487 aa14.25□□□□□ -0.13
NDC1-201ENST00000371429 ACVR2AP27037 513 aa14.25□□□□□ -0.13
NDC1-201ENST00000371429 ZC3H14Q6PJT7 736 aaKnown RBP14.25□□□□□ -0.13
NDC1-201ENST00000371429 SLC36A4Q6YBV0 504 aa14.25□□□□□ -0.13
NDC1-201ENST00000371429 LAPTM4BQ86VI4 370 aa14.25□□□□□ -0.13
NDC1-201ENST00000371429 PLXDC1Q8IUK5 500 aa14.25□□□□□ -0.13
NDC1-201ENST00000371429 C10orf82Q8WW14 230 aa14.25□□□□□ -0.13
NDC1-201ENST00000371429 SLC35C2Q9NQQ7 365 aa14.25□□□□□ -0.13
NDC1-201ENST00000371429 ABCB10Q9NRK6 738 aa14.25□□□□□ -0.13
NDC1-201ENST00000371429 GIN1Q9NXP7 522 aa14.25□□□□□ -0.13
NDC1-201ENST00000371429 HCSTQ9UBK5 93 aa14.25□□□□□ -0.13
NDC1-201ENST00000371429 WDR45Q9Y484 360 aa14.25□□□□□ -0.13
NDC1-201ENST00000371429 C6orf47O95873 294 aa14.25□□□□□ -0.13
NDC1-201ENST00000371429 RBMS1P29558 406 aaKnown RBP14.25□□□□□ -0.13
NDC1-201ENST00000371429 CXCL12P48061 93 aa14.25□□□□□ -0.13
NDC1-201ENST00000371429 OR10G2Q8NGC3 310 aa14.25□□□□□ -0.13
NDC1-201ENST00000371429 HLA-CQ95604 372 aa14.25□□□□□ -0.13
NDC1-201ENST00000371429 DEFB126Q9BYW3 111 aa14.25□□□□□ -0.13
NDC1-201ENST00000371429 CLEC4AQ9UMR7 237 aa14.25□□□□□ -0.13
NDC1-201ENST00000371429 HMGN1P05114 100 aa14.25□□□□□ -0.13
NDC1-201ENST00000371429 GJA8P48165 433 aa14.25□□□□□ -0.13
NDC1-201ENST00000371429 HHEXQ03014 270 aa14.25□□□□□ -0.13
NDC1-201ENST00000371429 CD47Q08722 323 aa14.25□□□□□ -0.13
NDC1-201ENST00000371429 ZNF234Q14588 700 aa14.25□□□□□ -0.13
NDC1-201ENST00000371429 C6orf52Q5T4I8 152 aa14.25□□□□□ -0.13
NDC1-201ENST00000371429 NRROSQ86YC3 692 aa14.25□□□□□ -0.13
NDC1-201ENST00000371429 TP53INP2Q8IXH6 220 aa14.25□□□□□ -0.13
NDC1-201ENST00000371429 OR5K1Q8NHB7 308 aa14.25□□□□□ -0.13
NDC1-201ENST00000371429 TCEAL4Q96EI5 215 aa14.25□□□□□ -0.13
NDC1-201ENST00000371429 NUP98P52948 1817 aa14.24□□□□□ -0.13
NDC1-201ENST00000371429 CPNE3O75131 537 aaKnown RBP14.24□□□□□ -0.13
NDC1-201ENST00000371429 CLEC3AO75596 197 aa14.24□□□□□ -0.13
NDC1-201ENST00000371429 NADKO95544 446 aaPredicted RBP14.24□□□□□ -0.13
NDC1-201ENST00000371429 GP1BBP13224 206 aa14.24□□□□□ -0.13
NDC1-201ENST00000371429 LRRC26Q2I0M4 334 aa14.24□□□□□ -0.13
NDC1-201ENST00000371429 TMEM44Q2T9K0 475 aa14.24□□□□□ -0.13
NDC1-201ENST00000371429 LACTB2Q53H82 288 aaPredicted RBP14.24□□□□□ -0.13
NDC1-201ENST00000371429 ZNF382Q96SR6 550 aa14.24□□□□□ -0.13
NDC1-201ENST00000371429 TAS2R9Q9NYW1 312 aa14.24□□□□□ -0.13
NDC1-201ENST00000371429 MARCH4Q9P2E8 410 aaPredicted RBP14.24□□□□□ -0.13
NDC1-201ENST00000371429 PRODH2Q9UF12 536 aa14.24□□□□□ -0.13
NDC1-201ENST00000371429 RARRES3Q9UL19 164 aa14.24□□□□□ -0.13
NDC1-201ENST00000371429 MAP1BP46821 2468 aaKnown RBP14.24□□□□□ -0.13
NDC1-201ENST00000371429 SERPINA3P01011 423 aa14.24□□□□□ -0.13
NDC1-201ENST00000371429 IFNA6P05013 189 aa14.24□□□□□ -0.13
NDC1-201ENST00000371429 H1F0P07305 194 aaKnown RBP14.24□□□□□ -0.13
NDC1-201ENST00000371429 GSTM4Q03013 218 aa14.24□□□□□ -0.13
NDC1-201ENST00000371429 PUM1Q14671 1186 aaKnown RBP eCLIP14.24□□□□□ -0.13
NDC1-201ENST00000371429 MAPK14Q16539 360 aa14.24□□□□□ -0.13
NDC1-201ENST00000371429 KIAA0319Q5VV43 1072 aa14.24□□□□□ -0.13
NDC1-201ENST00000371429 CRTC1Q6UUV9 634 aa14.24□□□□□ -0.13
NDC1-201ENST00000371429 PLD6Q8N2A8 252 aaKnown RBP14.24□□□□□ -0.13
NDC1-201ENST00000371429 OR4K1Q8NGD4 311 aa14.24□□□□□ -0.13
NDC1-201ENST00000371429 OR52E4Q8NGH9 312 aa14.24□□□□□ -0.13
NDC1-201ENST00000371429 NFKBIDQ8NI38 313 aa14.24□□□□□ -0.13
NDC1-201ENST00000371429 AQP12BA6NM10 295 aa14.24□□□□□ -0.13
NDC1-201ENST00000371429 KLF11O14901 512 aa14.24□□□□□ -0.13
NDC1-201ENST00000371429 RBMXL2O75526 392 aaKnown RBP14.24□□□□□ -0.13
NDC1-201ENST00000371429 AHSA1O95433 338 aa14.24□□□□□ -0.13
NDC1-201ENST00000371429 MATN1P21941 496 aa14.24□□□□□ -0.13
NDC1-201ENST00000371429 XKP51811 444 aa14.24□□□□□ -0.13
NDC1-201ENST00000371429 TBPL1P62380 186 aa14.24□□□□□ -0.13
NDC1-201ENST00000371429 CAMK1Q14012 370 aa14.24□□□□□ -0.13
NDC1-201ENST00000371429 ADGRE1Q14246 886 aa14.24□□□□□ -0.13
NDC1-201ENST00000371429 CLEC12AQ5QGZ9 265 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms