RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 ZNF773Q6PK81 442 aa12.36□□□□□ -0.43
GPC3-201ENST00000370818 RFPL4BQ6ZWI9 263 aa12.36□□□□□ -0.43
GPC3-201ENST00000370818 PARP8Q8N3A8 854 aa12.36□□□□□ -0.43
GPC3-201ENST00000370818 CPA6Q8N4T0 437 aa12.36□□□□□ -0.43
GPC3-201ENST00000370818 TRPV3Q8NET8 790 aa12.36□□□□□ -0.43
GPC3-201ENST00000370818 ZFP90Q8TF47 636 aa12.36□□□□□ -0.43
GPC3-201ENST00000370818 APOLD1Q96LR9 279 aa12.36□□□□□ -0.43
GPC3-201ENST00000370818 MAGEB10Q96LZ2 347 aaPredicted RBP12.36□□□□□ -0.43
GPC3-201ENST00000370818 HHIPQ96QV1 700 aa12.36□□□□□ -0.43
GPC3-201ENST00000370818 ZCCHC2Q9C0B9 1178 aaKnown RBP12.36□□□□□ -0.43
GPC3-201ENST00000370818 LMAN2LQ9H0V9 348 aa12.36□□□□□ -0.43
GPC3-201ENST00000370818 NKX2-4Q9H2Z4 354 aa12.36□□□□□ -0.43
GPC3-201ENST00000370818 SERHLQ9NQF3 203 aa12.36□□□□□ -0.43
GPC3-201ENST00000370818 PCDHGA11Q9Y5H2 935 aa12.36□□□□□ -0.43
GPC3-201ENST00000370818 KIAA1549LQ6ZVL6 1849 aa12.36□□□□□ -0.43
GPC3-201ENST00000370818 TRBV5-3A0A0A0MS03 114 aa12.35□□□□□ -0.43
GPC3-201ENST00000370818 RFXAPO00287 272 aa12.35□□□□□ -0.43
GPC3-201ENST00000370818 ACOX3O15254 700 aa12.35□□□□□ -0.43
GPC3-201ENST00000370818 B4GAT1O43505 415 aa12.35□□□□□ -0.43
GPC3-201ENST00000370818 B3GALT4O96024 378 aa12.35□□□□□ -0.43
GPC3-201ENST00000370818 ZNF8P17098 575 aaPredicted RBP12.35□□□□□ -0.43
GPC3-201ENST00000370818 MAPK9P45984 424 aa12.35□□□□□ -0.43
GPC3-201ENST00000370818 PLCL1Q15111 1095 aa12.35□□□□□ -0.43
GPC3-201ENST00000370818 LRIT3Q3SXY7 679 aa12.35□□□□□ -0.43
GPC3-201ENST00000370818 GTDC1Q4AE62 458 aa12.35□□□□□ -0.43
GPC3-201ENST00000370818 CYBRD1Q53TN4 286 aa12.35□□□□□ -0.43
GPC3-201ENST00000370818 CCNYL2Q5T2Q4 361 aa12.35□□□□□ -0.43
GPC3-201ENST00000370818 PIP5KL1Q5T9C9 394 aa12.35□□□□□ -0.43
GPC3-201ENST00000370818 GLYATQ6IB77 296 aa12.35□□□□□ -0.43
GPC3-201ENST00000370818 ADNP2Q6IQ32 1131 aa12.35□□□□□ -0.43
GPC3-201ENST00000370818 SLC22A16Q86VW1 577 aa12.35□□□□□ -0.43
GPC3-201ENST00000370818 BPHLQ86WA6 291 aaPredicted RBP12.35□□□□□ -0.43
GPC3-201ENST00000370818 PROSER1Q86XN7 944 aa12.35□□□□□ -0.43
GPC3-201ENST00000370818 RIMKLAQ8IXN7 391 aa12.35□□□□□ -0.43
GPC3-201ENST00000370818 PLA2G15Q8NCC3 412 aa12.35□□□□□ -0.43
GPC3-201ENST00000370818 PAPD5Q8NDF8 572 aaKnown RBP12.35□□□□□ -0.43
GPC3-201ENST00000370818 ZNF480Q8WV37 535 aa12.35□□□□□ -0.43
GPC3-201ENST00000370818 FKBP10Q96AY3 582 aa12.35□□□□□ -0.43
GPC3-201ENST00000370818 BIRC7Q96CA5 298 aa12.35□□□□□ -0.43
GPC3-201ENST00000370818 TXNDC15Q96J42 360 aa12.35□□□□□ -0.43
GPC3-201ENST00000370818 FCRL1Q96LA6 429 aa12.35□□□□□ -0.43
GPC3-201ENST00000370818 LINC00615Q96LM1 132 aaPredicted RBP12.35□□□□□ -0.43
GPC3-201ENST00000370818 FOPNLQ96NB1 174 aa12.35□□□□□ -0.43
GPC3-201ENST00000370818 MTERF1Q99551 399 aaKnown RBP12.35□□□□□ -0.43
GPC3-201ENST00000370818 HDAC8Q9BY41 377 aa12.35□□□□□ -0.43
GPC3-201ENST00000370818 TRIT1Q9H3H1 467 aaKnown RBP12.35□□□□□ -0.43
GPC3-201ENST00000370818 MARCH7Q9H992 704 aa12.35□□□□□ -0.43
GPC3-201ENST00000370818 SPATA6Q9NWH7 488 aaPredicted RBP12.35□□□□□ -0.43
GPC3-201ENST00000370818 PRELID1Q9Y255 219 aa12.35□□□□□ -0.43
GPC3-201ENST00000370818 KIF26AQ9ULI4 1882 aaPredicted RBP12.35□□□□□ -0.43
GPC3-201ENST00000370818 H0YIV9 168 aa12.35□□□□□ -0.43
GPC3-201ENST00000370818 ACPPP15309 386 aa12.35□□□□□ -0.43
GPC3-201ENST00000370818 CAPGP40121 348 aa12.35□□□□□ -0.43
GPC3-201ENST00000370818 ATP6AP1Q15904 470 aa12.35□□□□□ -0.43
GPC3-201ENST00000370818 CARTPTQ16568 116 aa12.35□□□□□ -0.43
GPC3-201ENST00000370818 SIGIRRQ6IA17 410 aa12.35□□□□□ -0.43
GPC3-201ENST00000370818 NOXRED1Q6NXP6 359 aa12.35□□□□□ -0.43
GPC3-201ENST00000370818 SPRED1Q7Z699 444 aa12.35□□□□□ -0.43
GPC3-201ENST00000370818 C11orf96Q7Z7L8 435 aa12.35□□□□□ -0.43
GPC3-201ENST00000370818 SDR16C5Q8N3Y7 309 aa12.35□□□□□ -0.43
GPC3-201ENST00000370818 DHRSXQ8N5I4 330 aa12.35□□□□□ -0.43
GPC3-201ENST00000370818 FBXO15Q8NCQ5 510 aaPredicted RBP12.35□□□□□ -0.43
GPC3-201ENST00000370818 TP53INP1Q96A56 240 aa12.35□□□□□ -0.43
GPC3-201ENST00000370818 TESCQ96BS2 214 aa12.35□□□□□ -0.43
GPC3-201ENST00000370818 VMP1Q96GC9 406 aa12.35□□□□□ -0.43
GPC3-201ENST00000370818 CDCA3Q99618 268 aaPredicted RBP12.35□□□□□ -0.43
GPC3-201ENST00000370818 SOX17Q9H6I2 414 aaPredicted RBP12.35□□□□□ -0.43
GPC3-201ENST00000370818 MAGEL2Q9UJ55 1249 aa12.35□□□□□ -0.43
GPC3-201ENST00000370818 SPTBN5Q9NRC6 3674 aaKnown RBP12.35□□□□□ -0.43
GPC3-201ENST00000370818 LOC105371267A0A1B0GV96 52 aa12.34□□□□□ -0.43
GPC3-201ENST00000370818 C1QTNF3-AMACRE9PGA6 284 aa12.34□□□□□ -0.43
GPC3-201ENST00000370818 POP7O75817 140 aaKnown RBP12.34□□□□□ -0.43
GPC3-201ENST00000370818 HOXB9P17482 250 aaPredicted RBP12.34□□□□□ -0.43
GPC3-201ENST00000370818 FASP25445 335 aa12.34□□□□□ -0.43
GPC3-201ENST00000370818 PTPN6P29350 595 aa12.34□□□□□ -0.43
GPC3-201ENST00000370818 DRD3P35462 400 aa12.34□□□□□ -0.43
GPC3-201ENST00000370818 PLA2G16P53816 162 aa12.34□□□□□ -0.43
GPC3-201ENST00000370818 ZNF33BQ06732 778 aa12.34□□□□□ -0.43
GPC3-201ENST00000370818 CYP4F3Q08477 520 aa12.34□□□□□ -0.43
GPC3-201ENST00000370818 CSTF3Q12996 717 aaKnown RBP12.34□□□□□ -0.43
GPC3-201ENST00000370818 RUNDC3AQ59EK9 446 aa12.34□□□□□ -0.43
GPC3-201ENST00000370818 GRHL2Q6ISB3 625 aa12.34□□□□□ -0.43
GPC3-201ENST00000370818 USP51Q70EK9 711 aa12.34□□□□□ -0.43
GPC3-201ENST00000370818 AKAP14Q86UN6 197 aa12.34□□□□□ -0.43
GPC3-201ENST00000370818 DCP2Q8IU60 420 aaKnown RBP12.34□□□□□ -0.43
GPC3-201ENST00000370818 SIX5Q8N196 739 aa12.34□□□□□ -0.43
GPC3-201ENST00000370818 MFSD4AQ8N468 514 aa12.34□□□□□ -0.43
GPC3-201ENST00000370818 LMNTD1Q8N9Z9 388 aa12.34□□□□□ -0.43
GPC3-201ENST00000370818 OR10A6Q8NH74 314 aa12.34□□□□□ -0.43
GPC3-201ENST00000370818 C11orf24Q96F05 449 aaPredicted RBP12.34□□□□□ -0.43
GPC3-201ENST00000370818 MYADMQ96S97 322 aa12.34□□□□□ -0.43
GPC3-201ENST00000370818 KXD1Q9BQD3 176 aa12.34□□□□□ -0.43
GPC3-201ENST00000370818 C9orf16Q9BUW7 83 aa12.34□□□□□ -0.43
GPC3-201ENST00000370818 EBPLQ9BY08 206 aa12.34□□□□□ -0.43
GPC3-201ENST00000370818 POLE4Q9NR33 117 aa12.34□□□□□ -0.43
GPC3-201ENST00000370818 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.34□□□□□ -0.43
GPC3-201ENST00000370818 ANAPC2Q9UJX6 822 aa12.34□□□□□ -0.43
GPC3-201ENST00000370818 PCDHB14Q9Y5E9 798 aa12.34□□□□□ -0.43
GPC3-201ENST00000370818 LRATO95237 230 aa12.34□□□□□ -0.43
GPC3-201ENST00000370818 RASAL1O95294 804 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms