RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 MSH2P43246 934 aa9.36□□□□□ -0.91
CD48-202ENST00000368046 SCTRP47872 440 aa9.36□□□□□ -0.91
CD48-202ENST00000368046 SERPINB9P50453 376 aa9.36□□□□□ -0.91
CD48-202ENST00000368046 MEF2AQ02078 507 aaPredicted RBP9.36□□□□□ -0.91
CD48-202ENST00000368046 DLG1Q12959 904 aa9.36□□□□□ -0.91
CD48-202ENST00000368046 NFATC3Q12968 1075 aa9.36□□□□□ -0.91
CD48-202ENST00000368046 BMPR2Q13873 1038 aa9.36□□□□□ -0.91
CD48-202ENST00000368046 ACAP2Q15057 778 aa9.36□□□□□ -0.91
CD48-202ENST00000368046 C18orf21Q32NC0 220 aaPredicted RBP9.36□□□□□ -0.91
CD48-202ENST00000368046 VWA2Q5GFL6 755 aa9.36□□□□□ -0.91
CD48-202ENST00000368046 UBAP2Q5T6F2 1119 aaKnown RBP9.36□□□□□ -0.91
CD48-202ENST00000368046 TMEM214Q6NUQ4 689 aaKnown RBP9.36□□□□□ -0.91
CD48-202ENST00000368046 TRMT10CQ7L0Y3 403 aaKnown RBP9.36□□□□□ -0.91
CD48-202ENST00000368046 EIF1ADQ8N9N8 165 aaKnown RBP9.36□□□□□ -0.91
CD48-202ENST00000368046 ZNF740Q8NDX6 193 aa9.36□□□□□ -0.91
CD48-202ENST00000368046 TRPV3Q8NET8 790 aa9.36□□□□□ -0.91
CD48-202ENST00000368046 RHEBL1Q8TAI7 183 aa9.36□□□□□ -0.91
CD48-202ENST00000368046 VPS50Q96JG6 964 aa9.36□□□□□ -0.91
CD48-202ENST00000368046 MACROD1Q9BQ69 325 aa9.36□□□□□ -0.91
CD48-202ENST00000368046 AIF1LQ9BQI0 150 aa9.36□□□□□ -0.91
CD48-202ENST00000368046 PRR14Q9BWN1 585 aa9.36□□□□□ -0.91
CD48-202ENST00000368046 YIPF2Q9BWQ6 316 aa9.36□□□□□ -0.91
CD48-202ENST00000368046 TRIM55Q9BYV6 548 aa9.36□□□□□ -0.91
CD48-202ENST00000368046 CD244Q9BZW8 370 aa9.36□□□□□ -0.91
CD48-202ENST00000368046 TGIF2Q9GZN2 237 aa9.36□□□□□ -0.91
CD48-202ENST00000368046 ALG9Q9H6U8 611 aa9.36□□□□□ -0.91
CD48-202ENST00000368046 MLXIPLQ9NP71 852 aa9.36□□□□□ -0.91
CD48-202ENST00000368046 MKKSQ9NPJ1 570 aaPredicted RBP9.36□□□□□ -0.91
CD48-202ENST00000368046 ATP13A2Q9NQ11 1180 aa9.36□□□□□ -0.91
CD48-202ENST00000368046 ZNF71Q9NQZ8 489 aaPredicted RBP9.36□□□□□ -0.91
CD48-202ENST00000368046 SNX15Q9NRS6 342 aa9.36□□□□□ -0.91
CD48-202ENST00000368046 SEMA3GQ9NS98 782 aa9.36□□□□□ -0.91
CD48-202ENST00000368046 P4HTMQ9NXG6 502 aa9.36□□□□□ -0.91
CD48-202ENST00000368046 GPRC5BQ9NZH0 403 aa9.36□□□□□ -0.91
CD48-202ENST00000368046 TRPC4Q9UBN4 977 aa9.36□□□□□ -0.91
CD48-202ENST00000368046 ZFP69BQ9UJL9 534 aa9.36□□□□□ -0.91
CD48-202ENST00000368046 ZNF180Q9UJW8 692 aa9.36□□□□□ -0.91
CD48-202ENST00000368046 MAP4K5Q9Y4K4 846 aa9.36□□□□□ -0.91
CD48-202ENST00000368046 PCDHGA9Q9Y5G4 932 aaKnown RBP9.36□□□□□ -0.91
CD48-202ENST00000368046 SLC22A7Q9Y694 548 aa9.36□□□□□ -0.91
CD48-202ENST00000368046 KALRNO60229 2985 aa9.36□□□□□ -0.91
CD48-202ENST00000368046 PIEZO2Q9H5I5 2752 aa9.35□□□□□ -0.91
CD48-202ENST00000368046 CACNA1GO43497 2377 aa9.35□□□□□ -0.91
CD48-202ENST00000368046 A0A096LPK6 155 aa9.35□□□□□ -0.91
CD48-202ENST00000368046 A0A0A6YYC8 382 aaPredicted RBP9.35□□□□□ -0.91
CD48-202ENST00000368046 POC1B-GALNT4F8VUJ3 575 aa9.35□□□□□ -0.91
CD48-202ENST00000368046 I3L1I5 382 aaPredicted RBP9.35□□□□□ -0.91
CD48-202ENST00000368046 AGPSO00116 658 aa9.35□□□□□ -0.91
CD48-202ENST00000368046 MAP2K7O14733 419 aa9.35□□□□□ -0.91
CD48-202ENST00000368046 CEACAM4O75871 244 aa9.35□□□□□ -0.91
CD48-202ENST00000368046 DNAJB5O75953 348 aa9.35□□□□□ -0.91
CD48-202ENST00000368046 KRT38O76015 456 aa9.35□□□□□ -0.91
CD48-202ENST00000368046 KLHL2O95198 593 aa9.35□□□□□ -0.91
CD48-202ENST00000368046 ALDOAP04075 364 aaKnown RBP9.35□□□□□ -0.91
CD48-202ENST00000368046 S100BP04271 92 aaPredicted RBP9.35□□□□□ -0.91
CD48-202ENST00000368046 CNTFP26441 200 aa9.35□□□□□ -0.91
CD48-202ENST00000368046 GMPRP36959 345 aa9.35□□□□□ -0.91
CD48-202ENST00000368046 SOX8P57073 446 aa9.35□□□□□ -0.91
CD48-202ENST00000368046 FOXL2P58012 376 aa9.35□□□□□ -0.91
CD48-202ENST00000368046 KLC1Q07866 573 aa9.35□□□□□ -0.91
CD48-202ENST00000368046 CDC16Q13042 620 aa9.35□□□□□ -0.91
CD48-202ENST00000368046 ATP1A4Q13733 1029 aa9.35□□□□□ -0.91
CD48-202ENST00000368046 RBBP5Q15291 538 aaKnown RBP9.35□□□□□ -0.91
CD48-202ENST00000368046 DCAF10Q5QP82 559 aa9.35□□□□□ -0.91
CD48-202ENST00000368046 LGSNQ5TDP6 509 aa9.35□□□□□ -0.91
CD48-202ENST00000368046 ATG9BQ674R7 924 aa9.35□□□□□ -0.91
CD48-202ENST00000368046 NIPAL1Q6NVV3 410 aa9.35□□□□□ -0.91
CD48-202ENST00000368046 SLCO4C1Q6ZQN7 724 aa9.35□□□□□ -0.91
CD48-202ENST00000368046 SHISA6Q6ZSJ9 500 aa9.35□□□□□ -0.91
CD48-202ENST00000368046 PPP1R32Q7Z5V6 425 aa9.35□□□□□ -0.91
CD48-202ENST00000368046 MRGPREQ86SM8 312 aa9.35□□□□□ -0.91
CD48-202ENST00000368046 TMEM151BQ8IW70 566 aa9.35□□□□□ -0.91
CD48-202ENST00000368046 AMER3Q8N944 861 aa9.35□□□□□ -0.91
CD48-202ENST00000368046 ANKRD53Q8N9V6 530 aa9.35□□□□□ -0.91
CD48-202ENST00000368046 CLEC1AQ8NC01 280 aa9.35□□□□□ -0.91
CD48-202ENST00000368046 KCT2Q8NC54 265 aa9.35□□□□□ -0.91
CD48-202ENST00000368046 PDPRQ8NCN5 879 aa9.35□□□□□ -0.91
CD48-202ENST00000368046 OR9A4Q8NGU2 314 aa9.35□□□□□ -0.91
CD48-202ENST00000368046 UHMK1Q8TAS1 419 aaKnown RBP9.35□□□□□ -0.91
CD48-202ENST00000368046 KCTD4Q8WVF5 259 aa9.35□□□□□ -0.91
CD48-202ENST00000368046 ESAMQ96AP7 390 aa9.35□□□□□ -0.91
CD48-202ENST00000368046 TSNARE1Q96NA8 513 aa9.35□□□□□ -0.91
CD48-202ENST00000368046 ATOH8Q96SQ7 321 aa9.35□□□□□ -0.91
CD48-202ENST00000368046 PAFAH2Q99487 392 aa9.35□□□□□ -0.91
CD48-202ENST00000368046 SLC25A23Q9BV35 468 aa9.35□□□□□ -0.91
CD48-202ENST00000368046 SOX17Q9H6I2 414 aaPredicted RBP9.35□□□□□ -0.91
CD48-202ENST00000368046 NT5DC2Q9H857 520 aa9.35□□□□□ -0.91
CD48-202ENST00000368046 IGSF5Q9NSI5 407 aa9.35□□□□□ -0.91
CD48-202ENST00000368046 DNAJC11Q9NVH1 559 aa9.35□□□□□ -0.91
CD48-202ENST00000368046 WWOXQ9NZC7 414 aa9.35□□□□□ -0.91
CD48-202ENST00000368046 CTSFQ9UBX1 484 aa9.35□□□□□ -0.91
CD48-202ENST00000368046 MRPS2Q9Y399 296 aaKnown RBP9.35□□□□□ -0.91
CD48-202ENST00000368046 PCDHGB7Q9Y5F8 929 aa9.35□□□□□ -0.91
CD48-202ENST00000368046 URADA6NGE7 173 aa9.34□□□□□ -0.91
CD48-202ENST00000368046 SYCE1LA8MT33 242 aa9.34□□□□□ -0.91
CD48-202ENST00000368046 K7EM74 188 aa9.34□□□□□ -0.91
CD48-202ENST00000368046 PCDH17O14917 1159 aa9.34□□□□□ -0.91
CD48-202ENST00000368046 CLGNO14967 610 aa9.34□□□□□ -0.91
CD48-202ENST00000368046 RIPK2O43353 540 aa9.34□□□□□ -0.91
CD48-202ENST00000368046 SUV39H1O43463 412 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms