RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 DOCK3Q8IZD9 2030 aa11.44□□□□□ -0.58
CDC42BPA-202ENST00000366764 DAPL1A0PJW8 107 aa11.44□□□□□ -0.58
CDC42BPA-202ENST00000366764 RCBTB2O95199 551 aa11.44□□□□□ -0.58
CDC42BPA-202ENST00000366764 POU2F1P14859 743 aa11.44□□□□□ -0.58
CDC42BPA-202ENST00000366764 RPS3P23396 243 aaKnown RBP eCLIP11.44□□□□□ -0.58
CDC42BPA-202ENST00000366764 STOMP27105 288 aa11.44□□□□□ -0.58
CDC42BPA-202ENST00000366764 SLC9A5Q14940 896 aa11.44□□□□□ -0.58
CDC42BPA-202ENST00000366764 OR4F3Q6IEY1 312 aa11.44□□□□□ -0.58
CDC42BPA-202ENST00000366764 GALNT12Q8IXK2 581 aa11.44□□□□□ -0.58
CDC42BPA-202ENST00000366764 ADGRG5Q8IZF4 528 aa11.44□□□□□ -0.58
CDC42BPA-202ENST00000366764 ACAT2Q9BWD1 397 aa11.44□□□□□ -0.58
CDC42BPA-202ENST00000366764 AMBNQ9NP70 447 aa11.44□□□□□ -0.58
CDC42BPA-202ENST00000366764 LRP8Q14114 963 aa11.43□□□□□ -0.58
CDC42BPA-202ENST00000366764 CHRNA6Q15825 494 aa11.43□□□□□ -0.58
CDC42BPA-202ENST00000366764 SLC36A3Q495N2 470 aa11.43□□□□□ -0.58
CDC42BPA-202ENST00000366764 RPL13AP3Q6NVV1 102 aa11.43□□□□□ -0.58
CDC42BPA-202ENST00000366764 C1orf52Q8N6N3 182 aaKnown RBP11.43□□□□□ -0.58
CDC42BPA-202ENST00000366764 ACVRL1P37023 503 aa11.43□□□□□ -0.58
CDC42BPA-202ENST00000366764 CD97P48960 835 aa11.43□□□□□ -0.58
CDC42BPA-202ENST00000366764 TSTQ16762 297 aaKnown RBP11.43□□□□□ -0.58
CDC42BPA-202ENST00000366764 CARD16Q5EG05 197 aa11.43□□□□□ -0.58
CDC42BPA-202ENST00000366764 LARP4Q71RC2 724 aaKnown RBP eCLIP11.43□□□□□ -0.583e-6■■□□□ 13.3
CDC42BPA-202ENST00000366764 SYVN1Q86TM6 617 aa11.43□□□□□ -0.58
CDC42BPA-202ENST00000366764 GPALPP1Q8IXQ4 340 aa11.43□□□□□ -0.58
CDC42BPA-202ENST00000366764 TRNT1Q96Q11 434 aaKnown RBP11.43□□□□□ -0.58
CDC42BPA-202ENST00000366764 IL4I1Q96RQ9 567 aa11.43□□□□□ -0.58
CDC42BPA-202ENST00000366764 GORASP2Q9H8Y8 452 aa11.43□□□□□ -0.58
CDC42BPA-202ENST00000366764 SLC22A14Q9Y267 594 aa11.43□□□□□ -0.58
CDC42BPA-202ENST00000366764 RAB36O95755 333 aa11.43□□□□□ -0.58
CDC42BPA-202ENST00000366764 NDUFS1P28331 727 aa11.43□□□□□ -0.58
CDC42BPA-202ENST00000366764 CDKN2DP55273 166 aa11.43□□□□□ -0.58
CDC42BPA-202ENST00000366764 PRAMEF14Q5SWL7 426 aa11.43□□□□□ -0.58
CDC42BPA-202ENST00000366764 PRAMEF13Q5VWM6 474 aa11.43□□□□□ -0.58
CDC42BPA-202ENST00000366764 TNFAIP8L2Q6P589 184 aaPredicted RBP11.43□□□□□ -0.58
CDC42BPA-202ENST00000366764 TMEM220Q6QAJ8 160 aa11.43□□□□□ -0.58
CDC42BPA-202ENST00000366764 MAMDC4Q6UXC1 1216 aa11.43□□□□□ -0.58
CDC42BPA-202ENST00000366764 CEACAM20Q6UY09 585 aa11.43□□□□□ -0.58
CDC42BPA-202ENST00000366764 ARFGAP1Q8N6T3 406 aa11.43□□□□□ -0.58
CDC42BPA-202ENST00000366764 DNASE1L2Q92874 299 aa11.43□□□□□ -0.58
CDC42BPA-202ENST00000366764 CCM2Q9BSQ5 444 aa11.43□□□□□ -0.58
CDC42BPA-202ENST00000366764 NDC1Q9BTX1 674 aa11.43□□□□□ -0.58
CDC42BPA-202ENST00000366764 HEBP1Q9NRV9 189 aa11.43□□□□□ -0.58
CDC42BPA-202ENST00000366764 CMAHPQ9Y471 501 aa11.43□□□□□ -0.58
CDC42BPA-202ENST00000366764 SLC19A2O60779 497 aa11.43□□□□□ -0.58
CDC42BPA-202ENST00000366764 ITGAMP11215 1152 aa11.43□□□□□ -0.58
CDC42BPA-202ENST00000366764 CSNK2A2P19784 350 aaPredicted RBP11.43□□□□□ -0.58
CDC42BPA-202ENST00000366764 SF1Q15637 639 aaKnown RBP11.43□□□□□ -0.58
CDC42BPA-202ENST00000366764 UBAP2Q5T6F2 1119 aaKnown RBP11.43□□□□□ -0.58
CDC42BPA-202ENST00000366764 GID4Q8IVV7 300 aa11.43□□□□□ -0.58
CDC42BPA-202ENST00000366764 OR8J1Q8NGP2 316 aa11.43□□□□□ -0.58
CDC42BPA-202ENST00000366764 MS4A12Q9NXJ0 267 aa11.43□□□□□ -0.58
CDC42BPA-202ENST00000366764 OR14I1A6ND48 311 aa11.43□□□□□ -0.58
CDC42BPA-202ENST00000366764 XKRYO14609 159 aa11.43□□□□□ -0.58
CDC42BPA-202ENST00000366764 OXSR1O95747 527 aaPredicted RBP11.43□□□□□ -0.58
CDC42BPA-202ENST00000366764 TACSTD2P09758 323 aa11.43□□□□□ -0.58
CDC42BPA-202ENST00000366764 RNF44Q7L0R7 432 aa11.43□□□□□ -0.58
CDC42BPA-202ENST00000366764 THOC6Q86W42 341 aaKnown RBP11.43□□□□□ -0.58
CDC42BPA-202ENST00000366764 B3GALT6Q96L58 329 aa11.43□□□□□ -0.58
CDC42BPA-202ENST00000366764 EPYCQ99645 322 aa11.43□□□□□ -0.58
CDC42BPA-202ENST00000366764 IQCF5A8MTL0 148 aa11.43□□□□□ -0.58
CDC42BPA-202ENST00000366764 LOC730098B7Z3J9 87 aa11.43□□□□□ -0.58
CDC42BPA-202ENST00000366764 PLOD2O00469 737 aa11.43□□□□□ -0.58
CDC42BPA-202ENST00000366764 SOX30O94993 753 aa11.43□□□□□ -0.58
CDC42BPA-202ENST00000366764 SPATA31D3P0C874 917 aa11.43□□□□□ -0.58
CDC42BPA-202ENST00000366764 HMGCLP35914 325 aa11.43□□□□□ -0.58
CDC42BPA-202ENST00000366764 MXD1Q05195 221 aa11.43□□□□□ -0.58
CDC42BPA-202ENST00000366764 RGMBQ6NW40 437 aa11.43□□□□□ -0.58
CDC42BPA-202ENST00000366764 AGTRAPQ6RW13 159 aa11.43□□□□□ -0.58
CDC42BPA-202ENST00000366764 SPATA31D4Q6ZUB0 917 aa11.43□□□□□ -0.58
CDC42BPA-202ENST00000366764 MZB1Q8WU39 189 aa11.43□□□□□ -0.58
CDC42BPA-202ENST00000366764 TNKS2Q9H2K2 1166 aa11.43□□□□□ -0.58
CDC42BPA-202ENST00000366764 PRKYO43930 277 aa11.43□□□□□ -0.58
CDC42BPA-202ENST00000366764 SLC36A4Q6YBV0 504 aa11.43□□□□□ -0.58
CDC42BPA-202ENST00000366764 GSTO2Q9H4Y5 243 aa11.43□□□□□ -0.58
CDC42BPA-202ENST00000366764 RANBP3Q9H6Z4 567 aaPredicted RBP11.43□□□□□ -0.58
CDC42BPA-202ENST00000366764 ZCCHC3Q9NUD5 404 aaKnown RBP11.43□□□□□ -0.58
CDC42BPA-202ENST00000366764 MARK1Q9P0L2 795 aa11.43□□□□□ -0.58
CDC42BPA-202ENST00000366764 EDIL3O43854 480 aa11.43□□□□□ -0.58
CDC42BPA-202ENST00000366764 CSTF1Q05048 431 aaKnown RBP11.43□□□□□ -0.58
CDC42BPA-202ENST00000366764 PNCKQ6P2M8 343 aa11.43□□□□□ -0.58
CDC42BPA-202ENST00000366764 SMPDL3AQ92484 453 aa11.43□□□□□ -0.58
CDC42BPA-202ENST00000366764 TMEM125Q96AQ2 219 aa11.43□□□□□ -0.58
CDC42BPA-202ENST00000366764 FKBP10Q96AY3 582 aa11.43□□□□□ -0.58
CDC42BPA-202ENST00000366764 NPLQ9BXD5 320 aaPredicted RBP11.43□□□□□ -0.58
CDC42BPA-202ENST00000366764 COMMD3Q9UBI1 195 aa11.43□□□□□ -0.58
CDC42BPA-202ENST00000366764 RNF11Q9Y3C5 154 aa11.43□□□□□ -0.58
CDC42BPA-202ENST00000366764 AOC2O75106 756 aa11.42□□□□□ -0.58
CDC42BPA-202ENST00000366764 UQCRC2P22695 453 aa11.42□□□□□ -0.58
CDC42BPA-202ENST00000366764 CSKP41240 450 aa11.42□□□□□ -0.58
CDC42BPA-202ENST00000366764 STT3AP46977 705 aa11.42□□□□□ -0.58
CDC42BPA-202ENST00000366764 ACTR6Q9GZN1 396 aa11.42□□□□□ -0.58
CDC42BPA-202ENST00000366764 IMP3Q9NV31 184 aaKnown RBP11.42□□□□□ -0.58
CDC42BPA-202ENST00000366764 TAS2R9Q9NYW1 312 aa11.42□□□□□ -0.58
CDC42BPA-202ENST00000366764 KCTD3Q9Y597 815 aa11.42□□□□□ -0.58
CDC42BPA-202ENST00000366764 ARNTLO00327 626 aa11.42□□□□□ -0.58
CDC42BPA-202ENST00000366764 WNT7BP56706 349 aa11.42□□□□□ -0.58
CDC42BPA-202ENST00000366764 EIF5AP63241 154 aaKnown RBP11.42□□□□□ -0.58
CDC42BPA-202ENST00000366764 CYP4F8P98187 520 aa11.42□□□□□ -0.58
CDC42BPA-202ENST00000366764 SMCO1Q147U7 214 aa11.42□□□□□ -0.58
CDC42BPA-202ENST00000366764 TAF13Q15543 124 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms