RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 SYT5O00445 386 aa7.93□□□□□ -1.14
HMGB1P39-201ENST00000366304 NDC80O14777 642 aa7.93□□□□□ -1.14
HMGB1P39-201ENST00000366304 PRMT3O60678 531 aa7.93□□□□□ -1.14
HMGB1P39-201ENST00000366304 DNAJB6O75190 326 aa7.93□□□□□ -1.14
HMGB1P39-201ENST00000366304 CRTAMO95727 393 aa7.93□□□□□ -1.14
HMGB1P39-201ENST00000366304 FTH1P02794 183 aa7.93□□□□□ -1.14
HMGB1P39-201ENST00000366304 ANXA5P08758 320 aa7.93□□□□□ -1.14
HMGB1P39-201ENST00000366304 ERVK-10P10266 1014 aa7.93□□□□□ -1.14
HMGB1P39-201ENST00000366304 TPH1P17752 444 aa7.93□□□□□ -1.14
HMGB1P39-201ENST00000366304 ACVR2AP27037 513 aa7.93□□□□□ -1.14
HMGB1P39-201ENST00000366304 PSMB4P28070 264 aa7.93□□□□□ -1.14
HMGB1P39-201ENST00000366304 UQCRC1P31930 480 aa7.93□□□□□ -1.14
HMGB1P39-201ENST00000366304 FOXN2P32314 431 aa7.93□□□□□ -1.14
HMGB1P39-201ENST00000366304 TRHRP34981 398 aaPredicted RBP7.93□□□□□ -1.14
HMGB1P39-201ENST00000366304 SLC26A5P58743 744 aa7.93□□□□□ -1.14
HMGB1P39-201ENST00000366304 RHAGQ02094 409 aa7.93□□□□□ -1.14
HMGB1P39-201ENST00000366304 HSPA14Q0VDF9 509 aa7.93□□□□□ -1.14
HMGB1P39-201ENST00000366304 SEMA3AQ14563 771 aa7.93□□□□□ -1.14
HMGB1P39-201ENST00000366304 MESDQ14696 234 aa7.93□□□□□ -1.14
HMGB1P39-201ENST00000366304 PCBP2Q15366 365 aaKnown RBP eCLIP7.93□□□□□ -1.14
HMGB1P39-201ENST00000366304 EXT1Q16394 746 aa7.93□□□□□ -1.14
HMGB1P39-201ENST00000366304 TYSND1Q2T9J0 566 aa7.93□□□□□ -1.14
HMGB1P39-201ENST00000366304 Q5PR19 223 aa7.93□□□□□ -1.14
HMGB1P39-201ENST00000366304 MFSD4BQ5TF39 518 aa7.93□□□□□ -1.14
HMGB1P39-201ENST00000366304 ZNF585AQ6P3V2 769 aa7.93□□□□□ -1.14
HMGB1P39-201ENST00000366304 ARHGAP11AQ6P4F7 1023 aa7.93□□□□□ -1.14
HMGB1P39-201ENST00000366304 ALKBH5Q6P6C2 394 aaKnown RBP7.93□□□□□ -1.14
HMGB1P39-201ENST00000366304 SEM1Q6ZVN7 128 aa7.93□□□□□ -1.14
HMGB1P39-201ENST00000366304 WDR53Q7Z5U6 358 aaPredicted RBP7.93□□□□□ -1.14
HMGB1P39-201ENST00000366304 RPS19BP1Q86WX3 136 aaKnown RBP7.93□□□□□ -1.14
HMGB1P39-201ENST00000366304 VSIG1Q86XK7 387 aa7.93□□□□□ -1.14
HMGB1P39-201ENST00000366304 PLD3Q8IV08 490 aa7.93□□□□□ -1.14
HMGB1P39-201ENST00000366304 LGI4Q8N135 537 aa7.93□□□□□ -1.14
HMGB1P39-201ENST00000366304 KRT222Q8N1A0 295 aa7.93□□□□□ -1.14
HMGB1P39-201ENST00000366304 SLC5A8Q8N695 610 aa7.93□□□□□ -1.14
HMGB1P39-201ENST00000366304 HMGCLL1Q8TB92 370 aa7.93□□□□□ -1.14
HMGB1P39-201ENST00000366304 FAM222BQ8WU58 562 aa7.93□□□□□ -1.14
HMGB1P39-201ENST00000366304 METTL21AQ8WXB1 218 aa7.93□□□□□ -1.14
HMGB1P39-201ENST00000366304 NAP1L5Q96NT1 182 aaPredicted RBP7.93□□□□□ -1.14
HMGB1P39-201ENST00000366304 MAK16Q9BXY0 300 aaKnown RBP7.93□□□□□ -1.14
HMGB1P39-201ENST00000366304 RBCK1Q9BYM8 510 aa7.93□□□□□ -1.14
HMGB1P39-201ENST00000366304 NUP62CLQ9H1M0 184 aa7.93□□□□□ -1.14
HMGB1P39-201ENST00000366304 LANCL2Q9NS86 450 aa7.93□□□□□ -1.14
HMGB1P39-201ENST00000366304 PIH1D1Q9NWS0 290 aaKnown RBP7.93□□□□□ -1.14
HMGB1P39-201ENST00000366304 CTTNBP2NLQ9P2B4 639 aa7.93□□□□□ -1.14
HMGB1P39-201ENST00000366304 SLC39A10Q9ULF5 831 aa7.93□□□□□ -1.14
HMGB1P39-201ENST00000366304 ALG6Q9Y672 507 aa7.93□□□□□ -1.14
HMGB1P39-201ENST00000366304 DNAJC13O75165 2243 aa7.93□□□□□ -1.14
HMGB1P39-201ENST00000366304 FEZF1A0PJY2 475 aa7.92□□□□□ -1.14
HMGB1P39-201ENST00000366304 CCDC162PA2VCL2 907 aa7.92□□□□□ -1.14
HMGB1P39-201ENST00000366304 FAM166BA8MTA8 275 aa7.92□□□□□ -1.14
HMGB1P39-201ENST00000366304 FAM171A2A8MVW0 826 aa7.92□□□□□ -1.14
HMGB1P39-201ENST00000366304 SGK494L7N484 410 aa7.92□□□□□ -1.14
HMGB1P39-201ENST00000366304 PRPF4O43172 522 aaKnown RBP eCLIP7.92□□□□□ -1.14
HMGB1P39-201ENST00000366304 CST8O60676 142 aa7.92□□□□□ -1.14
HMGB1P39-201ENST00000366304 CRLF1O75462 422 aa7.92□□□□□ -1.14
HMGB1P39-201ENST00000366304 CDC123O75794 336 aaPredicted RBP7.92□□□□□ -1.14
HMGB1P39-201ENST00000366304 FKBP9O95302 570 aa7.92□□□□□ -1.14
HMGB1P39-201ENST00000366304 C1orf105O95561 183 aa7.92□□□□□ -1.14
HMGB1P39-201ENST00000366304 CELA3AP09093 270 aa7.92□□□□□ -1.14
HMGB1P39-201ENST00000366304 ZFXP17010 805 aaPredicted RBP7.92□□□□□ -1.14
HMGB1P39-201ENST00000366304 TACR1P25103 407 aa7.92□□□□□ -1.14
HMGB1P39-201ENST00000366304 PSMA3P25788 255 aa7.92□□□□□ -1.14
HMGB1P39-201ENST00000366304 RBL1P28749 1068 aa7.92□□□□□ -1.14
HMGB1P39-201ENST00000366304 TNNT3P45378 269 aaPredicted RBP7.92□□□□□ -1.14
HMGB1P39-201ENST00000366304 XCR1P46094 333 aa7.92□□□□□ -1.14
HMGB1P39-201ENST00000366304 CYB561P49447 251 aa7.92□□□□□ -1.14
HMGB1P39-201ENST00000366304 HLCSP50747 726 aa7.92□□□□□ -1.14
HMGB1P39-201ENST00000366304 GEMP55040 296 aa7.92□□□□□ -1.14
HMGB1P39-201ENST00000366304 MYL5Q02045 173 aa7.92□□□□□ -1.14
HMGB1P39-201ENST00000366304 SLC25A35Q3KQZ1 300 aa7.92□□□□□ -1.14
HMGB1P39-201ENST00000366304 SHEQ5VZ18 495 aa7.92□□□□□ -1.14
HMGB1P39-201ENST00000366304 ZNF425Q6IV72 752 aa7.92□□□□□ -1.14
HMGB1P39-201ENST00000366304 POMZP3Q6PJE2 187 aa7.92□□□□□ -1.14
HMGB1P39-201ENST00000366304 SUSD1Q6UWL2 747 aa7.92□□□□□ -1.14
HMGB1P39-201ENST00000366304 PDSS2Q86YH6 399 aa7.92□□□□□ -1.14
HMGB1P39-201ENST00000366304 HORMAD2Q8N7B1 307 aa7.92□□□□□ -1.14
HMGB1P39-201ENST00000366304 POGLUT1Q8NBL1 392 aa7.92□□□□□ -1.14
HMGB1P39-201ENST00000366304 NAXEQ8NCW5 288 aa7.92□□□□□ -1.14
HMGB1P39-201ENST00000366304 OR51Q1Q8NH59 317 aa7.92□□□□□ -1.14
HMGB1P39-201ENST00000366304 KIAA1191Q96A73 305 aa7.92□□□□□ -1.14
HMGB1P39-201ENST00000366304 CALR3Q96L12 384 aaKnown RBP7.92□□□□□ -1.14
HMGB1P39-201ENST00000366304 Q96MF0 132 aa7.92□□□□□ -1.14
HMGB1P39-201ENST00000366304 SPATA13Q96N96 652 aa7.92□□□□□ -1.14
HMGB1P39-201ENST00000366304 C19orf43Q9BQ61 176 aa7.92□□□□□ -1.14
HMGB1P39-201ENST00000366304 ATG10Q9H0Y0 220 aa7.92□□□□□ -1.14
HMGB1P39-201ENST00000366304 ARNT2Q9HBZ2 717 aa7.92□□□□□ -1.14
HMGB1P39-201ENST00000366304 BEX4Q9NWD9 120 aaPredicted RBP7.92□□□□□ -1.14
HMGB1P39-201ENST00000366304 CDK2AP1O14519 115 aa7.91□□□□□ -1.14
HMGB1P39-201ENST00000366304 HAT1O14929 419 aa7.91□□□□□ -1.14
HMGB1P39-201ENST00000366304 KDM1AO60341 852 aa7.91□□□□□ -1.14
HMGB1P39-201ENST00000366304 TNNT1P13805 278 aa7.91□□□□□ -1.14
HMGB1P39-201ENST00000366304 AOAHP28039 575 aa7.91□□□□□ -1.14
HMGB1P39-201ENST00000366304 NR2C2P49116 596 aa7.91□□□□□ -1.14
HMGB1P39-201ENST00000366304 WNT3P56703 355 aa7.91□□□□□ -1.14
HMGB1P39-201ENST00000366304 PPP2R2BQ00005 443 aa7.91□□□□□ -1.14
HMGB1P39-201ENST00000366304 ITIH4Q14624 930 aa7.91□□□□□ -1.14
HMGB1P39-201ENST00000366304 ABRAXAS2Q15018 415 aa7.91□□□□□ -1.14
HMGB1P39-201ENST00000366304 POU4F3Q15319 338 aa7.91□□□□□ -1.14
HMGB1P39-201ENST00000366304 NFKBIBQ15653 356 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms