RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 MLLT6P55198 1093 aaPredicted RBP12.28□□□□□ -0.44
VAMP1-201ENST00000361716 RAB14P61106 215 aa12.28□□□□□ -0.44
VAMP1-201ENST00000361716 SCAPQ12770 1279 aa12.28□□□□□ -0.44
VAMP1-201ENST00000361716 COL9A2Q14055 689 aaPredicted RBP12.28□□□□□ -0.44
VAMP1-201ENST00000361716 GPR19Q15760 415 aa12.28□□□□□ -0.44
VAMP1-201ENST00000361716 SPATS1Q496A3 300 aa12.28□□□□□ -0.44
VAMP1-201ENST00000361716 PM20D1Q6GTS8 502 aa12.28□□□□□ -0.44
VAMP1-201ENST00000361716 CAPN13Q6MZZ7 669 aaPredicted RBP12.28□□□□□ -0.44
VAMP1-201ENST00000361716 B3GNT7Q8NFL0 401 aa12.28□□□□□ -0.44
VAMP1-201ENST00000361716 ZNF431Q8TF32 576 aaPredicted RBP12.28□□□□□ -0.44
VAMP1-201ENST00000361716 ASIC4Q96FT7 647 aa12.28□□□□□ -0.44
VAMP1-201ENST00000361716 SERPINB11Q96P15 392 aa12.28□□□□□ -0.44
VAMP1-201ENST00000361716 PTPN18Q99952 460 aa12.28□□□□□ -0.44
VAMP1-201ENST00000361716 AIFM2Q9BRQ8 373 aa12.28□□□□□ -0.44
VAMP1-201ENST00000361716 MCCC2Q9HCC0 563 aa12.28□□□□□ -0.44
VAMP1-201ENST00000361716 C11orf16Q9NQ32 467 aa12.28□□□□□ -0.44
VAMP1-201ENST00000361716 RDH8Q9NYR8 311 aa12.28□□□□□ -0.44
VAMP1-201ENST00000361716 SLC6A14Q9UN76 642 aa12.28□□□□□ -0.44
VAMP1-201ENST00000361716 SAMD4AQ9UPU9 718 aaKnown RBP12.28□□□□□ -0.44
VAMP1-201ENST00000361716 PCDHGB2Q9Y5G2 931 aa12.28□□□□□ -0.44
VAMP1-201ENST00000361716 GPX5O75715 221 aa12.28□□□□□ -0.44
VAMP1-201ENST00000361716 PKMP14618 531 aaKnown RBP12.28□□□□□ -0.44
VAMP1-201ENST00000361716 IL32P24001 234 aa12.28□□□□□ -0.44
VAMP1-201ENST00000361716 APEX1P27695 318 aaKnown RBP12.28□□□□□ -0.44
VAMP1-201ENST00000361716 FEN1P39748 380 aaKnown RBP12.28□□□□□ -0.44
VAMP1-201ENST00000361716 GZMKP49863 264 aa12.28□□□□□ -0.44
VAMP1-201ENST00000361716 AIF1P55008 147 aa12.28□□□□□ -0.44
VAMP1-201ENST00000361716 GPR68Q15743 365 aa12.28□□□□□ -0.44
VAMP1-201ENST00000361716 CCL14Q16627 93 aa12.28□□□□□ -0.44
VAMP1-201ENST00000361716 ANKRD54Q6NXT1 300 aa12.28□□□□□ -0.44
VAMP1-201ENST00000361716 PTCHD4Q6ZW05 846 aa12.28□□□□□ -0.44
VAMP1-201ENST00000361716 GPR142Q7Z601 462 aa12.28□□□□□ -0.44
VAMP1-201ENST00000361716 TMC8Q8IU68 726 aa12.28□□□□□ -0.44
VAMP1-201ENST00000361716 ZBTB44Q8NCP5 570 aa12.28□□□□□ -0.44
VAMP1-201ENST00000361716 PEX13Q92968 403 aa12.28□□□□□ -0.44
VAMP1-201ENST00000361716 ZNF566Q969W8 418 aa12.28□□□□□ -0.44
VAMP1-201ENST00000361716 KIAA1191Q96A73 305 aa12.28□□□□□ -0.44
VAMP1-201ENST00000361716 ISG20Q96AZ6 181 aaKnown RBP12.28□□□□□ -0.44
VAMP1-201ENST00000361716 RNF170Q96K19 258 aa12.28□□□□□ -0.44
VAMP1-201ENST00000361716 PANX1Q96RD7 426 aa12.28□□□□□ -0.44
VAMP1-201ENST00000361716 ADAM2Q99965 735 aa12.28□□□□□ -0.44
VAMP1-201ENST00000361716 AARSD1Q9BTE6 412 aaKnown RBP12.28□□□□□ -0.44
VAMP1-201ENST00000361716 C2orf49Q9BVC5 232 aaPredicted RBP12.28□□□□□ -0.44
VAMP1-201ENST00000361716 BRINP2Q9C0B6 783 aa12.28□□□□□ -0.44
VAMP1-201ENST00000361716 TFB2MQ9H5Q4 396 aaKnown RBP12.28□□□□□ -0.44
VAMP1-201ENST00000361716 SLAMF7Q9NQ25 335 aa12.28□□□□□ -0.44
VAMP1-201ENST00000361716 GTF2IRD1Q9UHL9 959 aa12.28□□□□□ -0.44
VAMP1-201ENST00000361716 ATP6V1HQ9UI12 483 aa12.28□□□□□ -0.44
VAMP1-201ENST00000361716 RIMKLBQ9ULI2 386 aa12.28□□□□□ -0.44
VAMP1-201ENST00000361716 TRAV6A0A075B6T7 132 aa12.28□□□□□ -0.44
VAMP1-201ENST00000361716 WASHC1A8K0Z3 465 aa12.28□□□□□ -0.44
VAMP1-201ENST00000361716 LDB2O43679 373 aa12.28□□□□□ -0.44
VAMP1-201ENST00000361716 ULK1O75385 1050 aa12.28□□□□□ -0.44
VAMP1-201ENST00000361716 CDK1P06493 297 aa12.28□□□□□ -0.44
VAMP1-201ENST00000361716 SLC2A2P11168 524 aaPredicted RBP12.28□□□□□ -0.44
VAMP1-201ENST00000361716 FDXRP22570 491 aa12.28□□□□□ -0.44
VAMP1-201ENST00000361716 ADRA1AP35348 466 aa12.28□□□□□ -0.44
VAMP1-201ENST00000361716 CDKN2CP42773 168 aa12.28□□□□□ -0.44
VAMP1-201ENST00000361716 SPIBQ01892 262 aa12.28□□□□□ -0.44
VAMP1-201ENST00000361716 MAB21L1Q13394 359 aa12.28□□□□□ -0.44
VAMP1-201ENST00000361716 KEAP1Q14145 624 aa12.28□□□□□ -0.44
VAMP1-201ENST00000361716 USP39Q53GS9 565 aaKnown RBP12.28□□□□□ -0.44
VAMP1-201ENST00000361716 LRRC66Q68CR7 880 aa12.28□□□□□ -0.44
VAMP1-201ENST00000361716 OR4F3Q6IEY1 312 aa12.28□□□□□ -0.44
VAMP1-201ENST00000361716 TYW3Q6IPR3 259 aaKnown RBP12.28□□□□□ -0.44
VAMP1-201ENST00000361716 KDELC1Q6UW63 502 aa12.28□□□□□ -0.44
VAMP1-201ENST00000361716 CFAP77Q6ZQR2 320 aa12.28□□□□□ -0.44
VAMP1-201ENST00000361716 GHDCQ8N2G8 530 aa12.28□□□□□ -0.44
VAMP1-201ENST00000361716 MAL2Q969L2 176 aa12.28□□□□□ -0.44
VAMP1-201ENST00000361716 IMP4Q96G21 291 aaKnown RBP12.28□□□□□ -0.44
VAMP1-201ENST00000361716 MCCC1Q96RQ3 725 aaPredicted RBP12.28□□□□□ -0.44
VAMP1-201ENST00000361716 RACGAP1Q9H0H5 632 aa12.28□□□□□ -0.44
VAMP1-201ENST00000361716 ATP13A1Q9HD20 1204 aa12.28□□□□□ -0.44
VAMP1-201ENST00000361716 RHCGQ9UBD6 479 aa12.28□□□□□ -0.44
VAMP1-201ENST00000361716 CMAHPQ9Y471 501 aa12.28□□□□□ -0.44
VAMP1-201ENST00000361716 PCDHGA6Q9Y5G7 932 aa12.28□□□□□ -0.44
VAMP1-201ENST00000361716 PPP2R3BQ9Y5P8 575 aa12.28□□□□□ -0.44
VAMP1-201ENST00000361716 MYO10Q9HD67 2058 aa12.28□□□□□ -0.44
VAMP1-201ENST00000361716 RLFQ13129 1914 aa12.28□□□□□ -0.44
VAMP1-201ENST00000361716 COL11A1P12107 1806 aaPredicted RBP12.28□□□□□ -0.44
VAMP1-201ENST00000361716 PRAMEF33A0A0G2JMD5 474 aa12.27□□□□□ -0.44
VAMP1-201ENST00000361716 A0A1B0GVC2 190 aa12.27□□□□□ -0.44
VAMP1-201ENST00000361716 A6NIN4 97 aa12.27□□□□□ -0.44
VAMP1-201ENST00000361716 ISM1B1AKI9 464 aa12.27□□□□□ -0.44
VAMP1-201ENST00000361716 HAS3O00219 553 aa12.27□□□□□ -0.44
VAMP1-201ENST00000361716 TNFRSF11BO00300 401 aa12.27□□□□□ -0.44
VAMP1-201ENST00000361716 PRAMEF10O60809 474 aa12.27□□□□□ -0.44
VAMP1-201ENST00000361716 PSMA1P25786 263 aaKnown RBP12.27□□□□□ -0.44
VAMP1-201ENST00000361716 LRRC74AQ0VAA2 488 aa12.27□□□□□ -0.44
VAMP1-201ENST00000361716 TARDBPQ13148 414 aaKnown RBP eCLIP12.27□□□□□ -0.44
VAMP1-201ENST00000361716 GALEQ14376 348 aa12.27□□□□□ -0.44
VAMP1-201ENST00000361716 GANABQ14697 944 aaKnown RBP12.27□□□□□ -0.44
VAMP1-201ENST00000361716 LCN1P1Q5VSP4 162 aa12.27□□□□□ -0.44
VAMP1-201ENST00000361716 GARNL3Q5VVW2 1013 aa12.27□□□□□ -0.44
VAMP1-201ENST00000361716 KDM4DQ6B0I6 523 aa12.27□□□□□ -0.44
VAMP1-201ENST00000361716 C22orf42Q6IC83 251 aa12.27□□□□□ -0.44
VAMP1-201ENST00000361716 ZNF767PQ75MW2 155 aa12.27□□□□□ -0.44
VAMP1-201ENST00000361716 STK40Q8N2I9 435 aa12.27□□□□□ -0.44
VAMP1-201ENST00000361716 APH1BQ8WW43 257 aa12.27□□□□□ -0.44
VAMP1-201ENST00000361716 C1GALT1C1Q96EU7 318 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms