RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 HNRNPCL3B7ZW38 293 aa13.53□□□□□ -0.24
SMC5-201ENST00000361138 FAM47E-STBD1D6RA91 191 aa13.53□□□□□ -0.24
SMC5-201ENST00000361138 IFNA6P05013 189 aa13.53□□□□□ -0.24
SMC5-201ENST00000361138 HNRNPCL4P0DMR1 293 aa13.53□□□□□ -0.24
SMC5-201ENST00000361138 TSPAN5P62079 268 aa13.53□□□□□ -0.24
SMC5-201ENST00000361138 VMACQ2NL98 169 aa13.53□□□□□ -0.24
SMC5-201ENST00000361138 FAM171BQ6P995 826 aa13.53□□□□□ -0.24
SMC5-201ENST00000361138 ZNF767PQ75MW2 155 aa13.53□□□□□ -0.24
SMC5-201ENST00000361138 SNX29P2Q8IUI4 249 aa13.53□□□□□ -0.24
SMC5-201ENST00000361138 LILRB4Q8NHJ6 448 aa13.53□□□□□ -0.24
SMC5-201ENST00000361138 CEP76Q8TAP6 659 aa13.53□□□□□ -0.24
SMC5-201ENST00000361138 KCNJ9Q92806 393 aa13.53□□□□□ -0.24
SMC5-201ENST00000361138 CLCA3PQ9Y6N3 262 aa13.53□□□□□ -0.24
SMC5-201ENST00000361138 ANKRD33BA6NCL7 494 aa13.52□□□□□ -0.24
SMC5-201ENST00000361138 SEPT4O43236 478 aa13.52□□□□□ -0.24
SMC5-201ENST00000361138 AQP9O43315 295 aa13.52□□□□□ -0.24
SMC5-201ENST00000361138 APOFQ13790 326 aa13.52□□□□□ -0.24
SMC5-201ENST00000361138 PAGE3Q5JUK9 113 aa13.52□□□□□ -0.24
SMC5-201ENST00000361138 AGMOQ6ZNB7 445 aa13.52□□□□□ -0.24
SMC5-201ENST00000361138 LYSMD3Q7Z3D4 306 aa13.52□□□□□ -0.24
SMC5-201ENST00000361138 MAVSQ7Z434 540 aa13.52□□□□□ -0.24
SMC5-201ENST00000361138 CFAP206Q8IYR0 622 aa13.52□□□□□ -0.24
SMC5-201ENST00000361138 TCEANCQ8N8B7 351 aa13.52□□□□□ -0.24
SMC5-201ENST00000361138 OR10T2Q8NGX3 314 aa13.52□□□□□ -0.24
SMC5-201ENST00000361138 TMEM174Q8WUU8 243 aa13.52□□□□□ -0.24
SMC5-201ENST00000361138 CCDC115Q96NT0 180 aa13.52□□□□□ -0.24
SMC5-201ENST00000361138 OCEL1Q9H607 264 aa13.52□□□□□ -0.24
SMC5-201ENST00000361138 TRIM36Q9NQ86 728 aa13.52□□□□□ -0.24
SMC5-201ENST00000361138 SDR39U1Q9NRG7 319 aaPredicted RBP13.52□□□□□ -0.24
SMC5-201ENST00000361138 OSER1Q9NX31 292 aa13.52□□□□□ -0.24
SMC5-201ENST00000361138 LAMP2P13473 410 aa13.52□□□□□ -0.24
SMC5-201ENST00000361138 PRKAR2AP13861 404 aaKnown RBP13.52□□□□□ -0.24
SMC5-201ENST00000361138 CRHBPP24387 322 aa13.52□□□□□ -0.24
SMC5-201ENST00000361138 CLK3P49761 638 aaKnown RBP13.52□□□□□ -0.24
SMC5-201ENST00000361138 INHBCP55103 352 aa13.52□□□□□ -0.24
SMC5-201ENST00000361138 PRR5P85299 388 aa13.52□□□□□ -0.24
SMC5-201ENST00000361138 CREB5Q02930 508 aa13.52□□□□□ -0.24
SMC5-201ENST00000361138 ZNF782Q6ZMW2 699 aaPredicted RBP13.52□□□□□ -0.24
SMC5-201ENST00000361138 NOXA1Q86UR1 476 aa13.52□□□□□ -0.24
SMC5-201ENST00000361138 ASB15Q8WXK1 588 aa13.52□□□□□ -0.24
SMC5-201ENST00000361138 IMP4Q96G21 291 aaKnown RBP13.52□□□□□ -0.24
SMC5-201ENST00000361138 IFT52Q9Y366 437 aa13.52□□□□□ -0.24
SMC5-201ENST00000361138 PCDHGB1Q9Y5G3 927 aa13.52□□□□□ -0.24
SMC5-201ENST00000361138 APOL3O95236 402 aa13.52□□□□□ -0.25
SMC5-201ENST00000361138 ZNF234Q14588 700 aa13.52□□□□□ -0.25
SMC5-201ENST00000361138 HLA-DQA1Q5Y7H0 255 aa13.52□□□□□ -0.25
SMC5-201ENST00000361138 UBE2Q1Q7Z7E8 422 aa13.52□□□□□ -0.25
SMC5-201ENST00000361138 DNASE1L2Q92874 299 aa13.52□□□□□ -0.25
SMC5-201ENST00000361138 TCF7L1Q9HCS4 588 aa13.52□□□□□ -0.25
SMC5-201ENST00000361138 ANXA2P2A6NMY6 339 aa13.52□□□□□ -0.25
SMC5-201ENST00000361138 HMGN1P05114 100 aa13.52□□□□□ -0.25
SMC5-201ENST00000361138 ANXA2P07355 339 aaKnown RBP13.52□□□□□ -0.25
SMC5-201ENST00000361138 ANXA3P12429 323 aa13.52□□□□□ -0.25
SMC5-201ENST00000361138 ITGA3P26006 1051 aa13.52□□□□□ -0.25
SMC5-201ENST00000361138 PITX1P78337 314 aaPredicted RBP13.52□□□□□ -0.25
SMC5-201ENST00000361138 ATAT1Q5SQI0 421 aa13.52□□□□□ -0.25
SMC5-201ENST00000361138 MEDAGQ5VYS4 303 aa13.52□□□□□ -0.25
SMC5-201ENST00000361138 COMMD7Q86VX2 200 aa13.52□□□□□ -0.25
SMC5-201ENST00000361138 PIAS4Q8N2W9 510 aaPredicted RBP13.52□□□□□ -0.25
SMC5-201ENST00000361138 NELL2Q99435 816 aa13.52□□□□□ -0.25
SMC5-201ENST00000361138 SYT17Q9BSW7 474 aa13.52□□□□□ -0.25
SMC5-201ENST00000361138 SPATA9Q9BWV2 254 aa13.52□□□□□ -0.25
SMC5-201ENST00000361138 SLC6A15Q9H2J7 730 aa13.52□□□□□ -0.25
SMC5-201ENST00000361138 OLAHQ9NV23 265 aa13.52□□□□□ -0.25
SMC5-201ENST00000361138 EXTL2Q9UBQ6 330 aa13.52□□□□□ -0.25
SMC5-201ENST00000361138 MAP2K5Q13163 448 aa13.52□□□□□ -0.25
SMC5-201ENST00000361138 RTL4Q6ZR62 310 aa13.52□□□□□ -0.25
SMC5-201ENST00000361138 ISCA2Q86U28 154 aa13.52□□□□□ -0.25
SMC5-201ENST00000361138 THOC6Q86W42 341 aaKnown RBP13.52□□□□□ -0.25
SMC5-201ENST00000361138 PHYKPLQ8IUZ5 450 aa13.52□□□□□ -0.25
SMC5-201ENST00000361138 DTWD1Q8N5C7 304 aa13.52□□□□□ -0.25
SMC5-201ENST00000361138 FAM110BQ8TC76 370 aa13.52□□□□□ -0.25
SMC5-201ENST00000361138 MUL1Q969V5 352 aa13.52□□□□□ -0.25
SMC5-201ENST00000361138 VMP1Q96GC9 406 aa13.52□□□□□ -0.25
SMC5-201ENST00000361138 TTPALQ9BTX7 342 aa13.52□□□□□ -0.25
SMC5-201ENST00000361138 GPSM3Q9Y4H4 160 aa13.52□□□□□ -0.25
SMC5-201ENST00000361138 MAFKO60675 156 aa13.51□□□□□ -0.25
SMC5-201ENST00000361138 PDYNP01213 254 aa13.51□□□□□ -0.25
SMC5-201ENST00000361138 LCKP06239 509 aa13.51□□□□□ -0.25
SMC5-201ENST00000361138 PCSK6P29122 969 aa13.51□□□□□ -0.25
SMC5-201ENST00000361138 CD68P34810 354 aaPredicted RBP13.51□□□□□ -0.25
SMC5-201ENST00000361138 RYKP34925 604 aa13.51□□□□□ -0.25
SMC5-201ENST00000361138 ALDH3B2P48448 385 aa13.51□□□□□ -0.25
SMC5-201ENST00000361138 GBX2P52951 348 aaPredicted RBP13.51□□□□□ -0.25
SMC5-201ENST00000361138 PSMA6P60900 246 aaKnown RBP13.51□□□□□ -0.25
SMC5-201ENST00000361138 DSG2Q14126 1118 aa13.51□□□□□ -0.25
SMC5-201ENST00000361138 NDUFA9Q16795 377 aa13.51□□□□□ -0.25
SMC5-201ENST00000361138 C4orf46Q504U0 113 aa13.51□□□□□ -0.25
SMC5-201ENST00000361138 MS4A13Q5J8X5 152 aa13.51□□□□□ -0.25
SMC5-201ENST00000361138 RGL4Q8IZJ4 473 aa13.51□□□□□ -0.25
SMC5-201ENST00000361138 ING5Q8WYH8 240 aa13.51□□□□□ -0.25
SMC5-201ENST00000361138 PIP5K1AQ99755 562 aa13.51□□□□□ -0.25
SMC5-201ENST00000361138 OR10H1Q9Y4A9 318 aa13.51□□□□□ -0.25
SMC5-201ENST00000361138 OARD1Q9Y530 152 aa13.51□□□□□ -0.25
SMC5-201ENST00000361138 KAT6AQ92794 2004 aa13.51□□□□□ -0.25
SMC5-201ENST00000361138 OR2AT4A6NND4 320 aa13.51□□□□□ -0.25
SMC5-201ENST00000361138 STBD1O95210 358 aa13.51□□□□□ -0.25
SMC5-201ENST00000361138 C22orf42Q6IC83 251 aa13.51□□□□□ -0.25
SMC5-201ENST00000361138 VWA5B2Q8N398 1253 aa13.51□□□□□ -0.25
SMC5-201ENST00000361138 FUZQ9BT04 418 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms