RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 ACY1Q03154 408 aa11.86□□□□□ -0.51
NIF3L1-201ENST00000359683 ZNF33BQ06732 778 aa11.86□□□□□ -0.51
NIF3L1-201ENST00000359683 CYP4F3Q08477 520 aa11.86□□□□□ -0.51
NIF3L1-201ENST00000359683 KCNAB1Q14722 419 aa11.86□□□□□ -0.51
NIF3L1-201ENST00000359683 SH2D4BQ5SQS7 431 aa11.86□□□□□ -0.51
NIF3L1-201ENST00000359683 FAM219BQ5XKK7 198 aa11.86□□□□□ -0.51
NIF3L1-201ENST00000359683 FRG2Q64ET8 278 aa11.86□□□□□ -0.51
NIF3L1-201ENST00000359683 CLEC6AQ6EIG7 209 aa11.86□□□□□ -0.51
NIF3L1-201ENST00000359683 FRMPD2BQ6IN97 320 aa11.86□□□□□ -0.51
NIF3L1-201ENST00000359683 VN1R5Q7Z5H4 357 aa11.86□□□□□ -0.51
NIF3L1-201ENST00000359683 VN1R4Q7Z5H5 301 aa11.86□□□□□ -0.51
NIF3L1-201ENST00000359683 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.86□□□□□ -0.51
NIF3L1-201ENST00000359683 OR4N4Q8N0Y3 316 aa11.86□□□□□ -0.51
NIF3L1-201ENST00000359683 CREB3L4Q8TEY5 395 aa11.86□□□□□ -0.51
NIF3L1-201ENST00000359683 ZNF473Q8WTR7 871 aaKnown RBP11.86□□□□□ -0.51
NIF3L1-201ENST00000359683 USP7Q93009 1102 aa11.86□□□□□ -0.51
NIF3L1-201ENST00000359683 LIN37Q96GY3 246 aaPredicted RBP11.86□□□□□ -0.51
NIF3L1-201ENST00000359683 FRG2BQ96QU4 278 aa11.86□□□□□ -0.51
NIF3L1-201ENST00000359683 STRADBQ9C0K7 418 aa11.86□□□□□ -0.51
NIF3L1-201ENST00000359683 PNPOQ9NVS9 261 aa11.86□□□□□ -0.51
NIF3L1-201ENST00000359683 PSD3Q9NYI0 1048 aa11.86□□□□□ -0.51
NIF3L1-201ENST00000359683 WASF3Q9UPY6 502 aa11.86□□□□□ -0.51
NIF3L1-201ENST00000359683 ANKDD1BA6NHY2 528 aa11.85□□□□□ -0.51
NIF3L1-201ENST00000359683 H3BMH7 237 aa11.85□□□□□ -0.51
NIF3L1-201ENST00000359683 FOXE1O00358 373 aaPredicted RBP11.85□□□□□ -0.51
NIF3L1-201ENST00000359683 ULK1O75385 1050 aa11.85□□□□□ -0.51
NIF3L1-201ENST00000359683 CRCPO75575 148 aa11.85□□□□□ -0.51
NIF3L1-201ENST00000359683 CLEC3AO75596 197 aa11.85□□□□□ -0.51
NIF3L1-201ENST00000359683 TBX6O95947 436 aaPredicted RBP11.85□□□□□ -0.51
NIF3L1-201ENST00000359683 SERPINB1P30740 379 aa11.85□□□□□ -0.51
NIF3L1-201ENST00000359683 NEK2P51955 445 aa11.85□□□□□ -0.51
NIF3L1-201ENST00000359683 IFT88Q13099 833 aa11.85□□□□□ -0.51
NIF3L1-201ENST00000359683 TCHHL1Q5QJ38 904 aaPredicted RBP11.85□□□□□ -0.51
NIF3L1-201ENST00000359683 ADNP2Q6IQ32 1131 aa11.85□□□□□ -0.51
NIF3L1-201ENST00000359683 RNF165Q6ZSG1 346 aa11.85□□□□□ -0.51
NIF3L1-201ENST00000359683 CRLF3Q8IUI8 442 aa11.85□□□□□ -0.51
NIF3L1-201ENST00000359683 BMPERQ8N8U9 685 aa11.85□□□□□ -0.51
NIF3L1-201ENST00000359683 TRPV3Q8NET8 790 aa11.85□□□□□ -0.51
NIF3L1-201ENST00000359683 HUS1BQ8NHY5 278 aa11.85□□□□□ -0.51
NIF3L1-201ENST00000359683 AGR3Q8TD06 166 aa11.85□□□□□ -0.51
NIF3L1-201ENST00000359683 ZNF501Q96CX3 271 aaPredicted RBP11.85□□□□□ -0.51
NIF3L1-201ENST00000359683 ZNF317Q96PQ6 595 aaPredicted RBP11.85□□□□□ -0.51
NIF3L1-201ENST00000359683 CMKLR1Q99788 373 aa11.85□□□□□ -0.51
NIF3L1-201ENST00000359683 SCNM1Q9BWG6 230 aa11.85□□□□□ -0.51
NIF3L1-201ENST00000359683 ELOVL6Q9H5J4 265 aa11.85□□□□□ -0.51
NIF3L1-201ENST00000359683 FGF21Q9NSA1 209 aa11.85□□□□□ -0.51
NIF3L1-201ENST00000359683 FARSBQ9NSD9 589 aaKnown RBP11.85□□□□□ -0.51
NIF3L1-201ENST00000359683 OCIAD1Q9NX40 245 aa11.85□□□□□ -0.51
NIF3L1-201ENST00000359683 AKAP7Q9P0M2 348 aaPredicted RBP11.85□□□□□ -0.51
NIF3L1-201ENST00000359683 PPT2Q9UMR5 302 aa11.85□□□□□ -0.51
NIF3L1-201ENST00000359683 DNAJC15Q9Y5T4 150 aa11.85□□□□□ -0.51
NIF3L1-201ENST00000359683 IGF2RP11717 2491 aa11.84□□□□□ -0.51
NIF3L1-201ENST00000359683 TMEM233B4DJY2 109 aa11.84□□□□□ -0.51
NIF3L1-201ENST00000359683 HYAL3O43820 417 aaPredicted RBP11.84□□□□□ -0.51
NIF3L1-201ENST00000359683 EDF1O60869 148 aaKnown RBP11.84□□□□□ -0.51
NIF3L1-201ENST00000359683 PDYNP01213 254 aa11.84□□□□□ -0.51
NIF3L1-201ENST00000359683 PCNAP12004 261 aa11.84□□□□□ -0.51
NIF3L1-201ENST00000359683 HTR6P50406 440 aa11.84□□□□□ -0.51
NIF3L1-201ENST00000359683 VSX2P58304 361 aaPredicted RBP11.84□□□□□ -0.51
NIF3L1-201ENST00000359683 MC2RQ01718 297 aa11.84□□□□□ -0.51
NIF3L1-201ENST00000359683 PWP1Q13610 501 aa11.84□□□□□ -0.51
NIF3L1-201ENST00000359683 GPR19Q15760 415 aa11.84□□□□□ -0.51
NIF3L1-201ENST00000359683 DEFB110Q30KQ9 67 aa11.84□□□□□ -0.51
NIF3L1-201ENST00000359683 WASHC2DQ5SRD0 308 aa11.84□□□□□ -0.51
NIF3L1-201ENST00000359683 MANEAQ5SRI9 462 aa11.84□□□□□ -0.51
NIF3L1-201ENST00000359683 TMPRSS7Q7RTY8 843 aa11.84□□□□□ -0.51
NIF3L1-201ENST00000359683 TRIM46Q7Z4K8 759 aa11.84□□□□□ -0.51
NIF3L1-201ENST00000359683 ASPGQ86U10 573 aa11.84□□□□□ -0.51
NIF3L1-201ENST00000359683 BPHLQ86WA6 291 aaPredicted RBP11.84□□□□□ -0.51
NIF3L1-201ENST00000359683 PIWIL2Q8TC59 973 aaKnown RBP11.84□□□□□ -0.51
NIF3L1-201ENST00000359683 NT5CQ8TCD5 201 aa11.84□□□□□ -0.51
NIF3L1-201ENST00000359683 SLC13A3Q8WWT9 602 aa11.84□□□□□ -0.51
NIF3L1-201ENST00000359683 SELENOMQ8WWX9 145 aa11.84□□□□□ -0.51
NIF3L1-201ENST00000359683 RERGQ96A58 199 aaPredicted RBP11.84□□□□□ -0.51
NIF3L1-201ENST00000359683 MTFMTQ96DP5 389 aaKnown RBP11.84□□□□□ -0.51
NIF3L1-201ENST00000359683 FAR2Q96K12 515 aa11.84□□□□□ -0.51
NIF3L1-201ENST00000359683 TMEM121BQ9BXQ6 578 aaPredicted RBP11.84□□□□□ -0.51
NIF3L1-201ENST00000359683 TUBB1Q9H4B7 451 aa11.84□□□□□ -0.51
NIF3L1-201ENST00000359683 FBXO8Q9NRD0 319 aa11.84□□□□□ -0.51
NIF3L1-201ENST00000359683 KIF26BQ2KJY2 2108 aa11.84□□□□□ -0.51
NIF3L1-201ENST00000359683 SPEGQ15772 3267 aa11.83□□□□□ -0.52
NIF3L1-201ENST00000359683 ADAMTS20P59510 1910 aa11.83□□□□□ -0.52
NIF3L1-201ENST00000359683 FRYQ5TBA9 3013 aa11.83□□□□□ -0.52
NIF3L1-201ENST00000359683 CCDC187A0A096LP49 1063 aa11.83□□□□□ -0.52
NIF3L1-201ENST00000359683 EFCAB7A8K855 629 aa11.83□□□□□ -0.52
NIF3L1-201ENST00000359683 MAGEB17A8MXT2 336 aa11.83□□□□□ -0.52
NIF3L1-201ENST00000359683 B4E171 279 aa11.83□□□□□ -0.52
NIF3L1-201ENST00000359683 SLCO1B7G3V0H7 640 aa11.83□□□□□ -0.52
NIF3L1-201ENST00000359683 TXNDC9O14530 226 aa11.83□□□□□ -0.52
NIF3L1-201ENST00000359683 CHEK2O96017 543 aa11.83□□□□□ -0.52
NIF3L1-201ENST00000359683 CTSBP07858 339 aa11.83□□□□□ -0.52
NIF3L1-201ENST00000359683 SERPINA6P08185 405 aa11.83□□□□□ -0.52
NIF3L1-201ENST00000359683 HSD3B1P14060 373 aa11.83□□□□□ -0.52
NIF3L1-201ENST00000359683 HSD3B2P26439 372 aa11.83□□□□□ -0.52
NIF3L1-201ENST00000359683 TSPAN7P41732 249 aa11.83□□□□□ -0.52
NIF3L1-201ENST00000359683 HK2P52789 917 aa11.83□□□□□ -0.52
NIF3L1-201ENST00000359683 HYAL2Q12891 473 aa11.83□□□□□ -0.52
NIF3L1-201ENST00000359683 TARDBPQ13148 414 aaKnown RBP eCLIP11.83□□□□□ -0.52
NIF3L1-201ENST00000359683 EIF3IQ13347 325 aaKnown RBP11.83□□□□□ -0.52
NIF3L1-201ENST00000359683 IL11RAQ14626 422 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms