RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 SLC44A3Q8N4M1 653 aa8.52□□□□□ -1.05
COL6A6-201ENST00000358511 RASGEF1AQ8N9B8 481 aa8.52□□□□□ -1.05
COL6A6-201ENST00000358511 C3orf58Q8NDZ4 430 aa8.52□□□□□ -1.05
COL6A6-201ENST00000358511 SLC29A3Q9BZD2 475 aa8.52□□□□□ -1.05
COL6A6-201ENST00000358511 MOCS1Q9NZB8 636 aa8.52□□□□□ -1.05
COL6A6-201ENST00000358511 CFAP97Q9P2B7 532 aa8.52□□□□□ -1.05
COL6A6-201ENST00000358511 CEPT1Q9Y6K0 416 aa8.52□□□□□ -1.05
COL6A6-201ENST00000358511 ZNF142P52746 1687 aaPredicted RBP8.52□□□□□ -1.05
COL6A6-201ENST00000358511 PROM1O43490 865 aa8.52□□□□□ -1.05
COL6A6-201ENST00000358511 TBL1XO60907 577 aa8.52□□□□□ -1.05
COL6A6-201ENST00000358511 DBIP07108 87 aaKnown RBP8.52□□□□□ -1.05
COL6A6-201ENST00000358511 CNTN2Q02246 1040 aa8.52□□□□□ -1.05
COL6A6-201ENST00000358511 EMX2Q04743 252 aa8.52□□□□□ -1.05
COL6A6-201ENST00000358511 PPP1R8Q12972 351 aaKnown RBP8.52□□□□□ -1.05
COL6A6-201ENST00000358511 GRHL2Q6ISB3 625 aa8.52□□□□□ -1.05
COL6A6-201ENST00000358511 APOBEC3HQ6NTF7 200 aaKnown RBP8.52□□□□□ -1.05
COL6A6-201ENST00000358511 PNLDC1Q8NA58 520 aaKnown RBP8.52□□□□□ -1.05
COL6A6-201ENST00000358511 SLC35G5Q96KT7 338 aa8.52□□□□□ -1.05
COL6A6-201ENST00000358511 TSSK6Q9BXA6 273 aa8.52□□□□□ -1.05
COL6A6-201ENST00000358511 DMAC2Q9NW81 257 aa8.52□□□□□ -1.05
COL6A6-201ENST00000358511 ERVK-19Q9WJR5 959 aa8.52□□□□□ -1.05
COL6A6-201ENST00000358511 MRPS33Q9Y291 106 aaKnown RBP8.52□□□□□ -1.05
COL6A6-201ENST00000358511 SNX10Q9Y5X0 201 aa8.52□□□□□ -1.05
COL6A6-201ENST00000358511 CCL15-CCL14A0A0B4J2E2 113 aa8.52□□□□□ -1.05
COL6A6-201ENST00000358511 C13orf42A0A1B0GVH6 325 aa8.52□□□□□ -1.05
COL6A6-201ENST00000358511 IL3P08700 152 aa8.52□□□□□ -1.05
COL6A6-201ENST00000358511 THEGLP0DJG4 465 aa8.52□□□□□ -1.05
COL6A6-201ENST00000358511 DGKQP52824 942 aa8.52□□□□□ -1.05
COL6A6-201ENST00000358511 CCL15Q16663 113 aa8.52□□□□□ -1.05
COL6A6-201ENST00000358511 TSPYL5Q86VY4 417 aaPredicted RBP8.52□□□□□ -1.05
COL6A6-201ENST00000358511 PTERQ96BW5 349 aa8.52□□□□□ -1.05
COL6A6-201ENST00000358511 CDK15Q96Q40 435 aa8.52□□□□□ -1.05
COL6A6-201ENST00000358511 ADAM7Q9H2U9 754 aa8.52□□□□□ -1.05
COL6A6-201ENST00000358511 UNKLQ9H9P5 680 aaKnown RBP8.52□□□□□ -1.05
COL6A6-201ENST00000358511 PRMT2P55345 433 aa8.52□□□□□ -1.05
COL6A6-201ENST00000358511 TAGLNQ01995 201 aaKnown RBP8.52□□□□□ -1.05
COL6A6-201ENST00000358511 CARM1Q86X55 608 aa8.52□□□□□ -1.05
COL6A6-201ENST00000358511 TICAM1Q8IUC6 712 aa8.52□□□□□ -1.05
COL6A6-201ENST00000358511 FAM120CQ9NX05 1096 aaKnown RBP8.52□□□□□ -1.05
COL6A6-201ENST00000358511 C2orf92A0A1B0GVN3 265 aa8.52□□□□□ -1.05
COL6A6-201ENST00000358511 SNHG28P0DPA3 235 aa8.52□□□□□ -1.05
COL6A6-201ENST00000358511 VAMP2P63027 116 aa8.52□□□□□ -1.05
COL6A6-201ENST00000358511 VLDLRP98155 873 aa8.52□□□□□ -1.05
COL6A6-201ENST00000358511 GK2Q14410 553 aaPredicted RBP8.52□□□□□ -1.05
COL6A6-201ENST00000358511 NATD1Q8N6N6 113 aa8.52□□□□□ -1.05
COL6A6-201ENST00000358511 SIMC1Q8NDZ2 872 aa8.52□□□□□ -1.05
COL6A6-201ENST00000358511 DENND1AQ8TEH3 1009 aa8.52□□□□□ -1.05
COL6A6-201ENST00000358511 ALPK1Q96QP1 1244 aa8.52□□□□□ -1.05
COL6A6-201ENST00000358511 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.52□□□□□ -1.05
COL6A6-201ENST00000358511 PCBD2Q9H0N5 130 aa8.52□□□□□ -1.05
COL6A6-201ENST00000358511 MRC1P22897 1456 aa8.52□□□□□ -1.05
COL6A6-201ENST00000358511 MYPNQ86TC9 1320 aa8.51□□□□□ -1.05
COL6A6-201ENST00000358511 ROBO1Q9Y6N7 1651 aa8.51□□□□□ -1.05
COL6A6-201ENST00000358511 A0A1W2PRQ8 180 aa8.51□□□□□ -1.05
COL6A6-201ENST00000358511 C2orf74A8MZ97 194 aa8.51□□□□□ -1.05
COL6A6-201ENST00000358511 F5H0A9 414 aaPredicted RBP8.51□□□□□ -1.05
COL6A6-201ENST00000358511 HTR1EP28566 365 aa8.51□□□□□ -1.05
COL6A6-201ENST00000358511 AGAP6Q5VW22 663 aa8.51□□□□□ -1.05
COL6A6-201ENST00000358511 DGLUCYQ7Z3D6 616 aa8.51□□□□□ -1.05
COL6A6-201ENST00000358511 GID4Q8IVV7 300 aa8.51□□□□□ -1.05
COL6A6-201ENST00000358511 ATAD1Q8NBU5 361 aa8.51□□□□□ -1.05
COL6A6-201ENST00000358511 MFSD8Q8NHS3 518 aa8.51□□□□□ -1.05
COL6A6-201ENST00000358511 SNAPC3Q92966 411 aa8.51□□□□□ -1.05
COL6A6-201ENST00000358511 AGAP4Q96P64 663 aa8.51□□□□□ -1.05
COL6A6-201ENST00000358511 RIOK2Q9BVS4 552 aaKnown RBP8.51□□□□□ -1.05
COL6A6-201ENST00000358511 THG1LQ9NWX6 298 aaKnown RBP8.51□□□□□ -1.05
COL6A6-201ENST00000358511 VPS29Q9UBQ0 182 aa8.51□□□□□ -1.05
COL6A6-201ENST00000358511 LRRC37A3O60309 1634 aa8.51□□□□□ -1.05
COL6A6-201ENST00000358511 IQCF5A8MTL0 148 aa8.51□□□□□ -1.05
COL6A6-201ENST00000358511 BHMG1C9JSJ3 638 aaPredicted RBP8.51□□□□□ -1.05
COL6A6-201ENST00000358511 CCL22O00626 93 aa8.51□□□□□ -1.05
COL6A6-201ENST00000358511 CNTN5O94779 1100 aa8.51□□□□□ -1.05
COL6A6-201ENST00000358511 RASGRP1O95267 797 aa8.51□□□□□ -1.05
COL6A6-201ENST00000358511 SSTP61278 116 aa8.51□□□□□ -1.05
COL6A6-201ENST00000358511 NPRL3Q12980 569 aa8.51□□□□□ -1.05
COL6A6-201ENST00000358511 FNDC3BQ53EP0 1204 aaKnown RBP8.51□□□□□ -1.05
COL6A6-201ENST00000358511 NKAPLQ5M9Q1 402 aa8.51□□□□□ -1.05
COL6A6-201ENST00000358511 TPGS1Q6ZTW0 290 aa8.51□□□□□ -1.05
COL6A6-201ENST00000358511 ATP6V1C2Q8NEY4 427 aa8.51□□□□□ -1.05
COL6A6-201ENST00000358511 NR4A3Q92570 626 aa8.51□□□□□ -1.05
COL6A6-201ENST00000358511 GTF2H4Q92759 462 aa8.51□□□□□ -1.05
COL6A6-201ENST00000358511 SH3YL1Q96HL8 342 aaPredicted RBP8.51□□□□□ -1.05
COL6A6-201ENST00000358511 TBX5Q99593 518 aa8.51□□□□□ -1.05
COL6A6-201ENST00000358511 GPN2Q9H9Y4 310 aaPredicted RBP8.51□□□□□ -1.05
COL6A6-201ENST00000358511 FLRT2O43155 660 aa8.51□□□□□ -1.05
COL6A6-201ENST00000358511 EFNA1P20827 205 aaPredicted RBP8.51□□□□□ -1.05
COL6A6-201ENST00000358511 ADH6P28332 368 aa8.51□□□□□ -1.05
COL6A6-201ENST00000358511 PLEKHN1Q494U1 663 aaPredicted RBP8.51□□□□□ -1.05
COL6A6-201ENST00000358511 CILP2Q8IUL8 1156 aa8.51□□□□□ -1.05
COL6A6-201ENST00000358511 NELL2Q99435 816 aa8.51□□□□□ -1.05
COL6A6-201ENST00000358511 BEX1Q9HBH7 125 aa8.51□□□□□ -1.05
COL6A6-201ENST00000358511 TMEM184CQ9NVA4 438 aa8.51□□□□□ -1.05
COL6A6-201ENST00000358511 ERVK-18Q9QC07 812 aa8.51□□□□□ -1.05
COL6A6-201ENST00000358511 CPQQ9Y646 472 aa8.51□□□□□ -1.05
COL6A6-201ENST00000358511 COL1A2P08123 1366 aa8.51□□□□□ -1.05
COL6A6-201ENST00000358511 INSIG1O15503 277 aa8.51□□□□□ -1.05
COL6A6-201ENST00000358511 G6PDP11413 515 aa8.51□□□□□ -1.05
COL6A6-201ENST00000358511 DSTNP60981 165 aa8.51□□□□□ -1.05
COL6A6-201ENST00000358511 PPP1R3AQ16821 1122 aa8.51□□□□□ -1.05
COL6A6-201ENST00000358511 C22orf42Q6IC83 251 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms