RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 C3orf18Q9UK00 162 aa13.78□□□□□ -0.2
NIPAL3-203ENST00000358028 WDR87Q6ZQQ6 2873 aa13.78□□□□□ -0.2
NIPAL3-203ENST00000358028 CFAP54Q96N23 3096 aa13.78□□□□□ -0.2
NIPAL3-203ENST00000358028 KPNA3O00505 521 aaPredicted RBP13.78□□□□□ -0.2
NIPAL3-203ENST00000358028 GSNP06396 782 aa13.78□□□□□ -0.2
NIPAL3-203ENST00000358028 CRHBPP24387 322 aa13.78□□□□□ -0.2
NIPAL3-203ENST00000358028 GSTM2P28161 218 aa13.78□□□□□ -0.2
NIPAL3-203ENST00000358028 CDKN2CP42773 168 aa13.78□□□□□ -0.2
NIPAL3-203ENST00000358028 MAPK9P45984 424 aa13.78□□□□□ -0.2
NIPAL3-203ENST00000358028 RAD23AP54725 363 aa13.78□□□□□ -0.2
NIPAL3-203ENST00000358028 CTBSQ01459 385 aa13.78□□□□□ -0.2
NIPAL3-203ENST00000358028 MTAPQ13126 283 aa13.78□□□□□ -0.2
NIPAL3-203ENST00000358028 NAE1Q13564 534 aa13.78□□□□□ -0.2
NIPAL3-203ENST00000358028 CCSMST1Q4G0I0 132 aa13.78□□□□□ -0.2
NIPAL3-203ENST00000358028 OR4F3Q6IEY1 312 aa13.78□□□□□ -0.2
NIPAL3-203ENST00000358028 TMEM220Q6QAJ8 160 aa13.78□□□□□ -0.2
NIPAL3-203ENST00000358028 SYT12Q8IV01 421 aa13.78□□□□□ -0.2
NIPAL3-203ENST00000358028 SLC22A15Q8IZD6 547 aa13.78□□□□□ -0.2
NIPAL3-203ENST00000358028 PGBD3Q8N328 593 aa13.78□□□□□ -0.2
NIPAL3-203ENST00000358028 LILRA3Q8N6C8 439 aaPredicted RBP13.78□□□□□ -0.2
NIPAL3-203ENST00000358028 FOXJ1Q92949 421 aa13.78□□□□□ -0.2
NIPAL3-203ENST00000358028 CLDN23Q96B33 292 aa13.78□□□□□ -0.2
NIPAL3-203ENST00000358028 DTD2Q96FN9 168 aa13.78□□□□□ -0.2
NIPAL3-203ENST00000358028 MED8Q96G25 268 aa13.78□□□□□ -0.2
NIPAL3-203ENST00000358028 PYURFQ96I23 114 aa13.78□□□□□ -0.2
NIPAL3-203ENST00000358028 METTL2AQ96IZ6 378 aaKnown RBP13.78□□□□□ -0.2
NIPAL3-203ENST00000358028 EGLN2Q96KS0 407 aa13.78□□□□□ -0.2
NIPAL3-203ENST00000358028 PKP4Q99569 1192 aa13.78□□□□□ -0.2
NIPAL3-203ENST00000358028 EBPLQ9BY08 206 aa13.78□□□□□ -0.2
NIPAL3-203ENST00000358028 LMAN1LQ9HAT1 526 aa13.78□□□□□ -0.2
NIPAL3-203ENST00000358028 FAF1Q9UNN5 650 aaPredicted RBP13.78□□□□□ -0.2
NIPAL3-203ENST00000358028 SLC27A6Q9Y2P4 619 aa13.78□□□□□ -0.2
NIPAL3-203ENST00000358028 ORC6Q9Y5N6 252 aa13.78□□□□□ -0.2
NIPAL3-203ENST00000358028 SPINT1O43278 529 aa13.77□□□□□ -0.21
NIPAL3-203ENST00000358028 B3GALT4O96024 378 aa13.77□□□□□ -0.21
NIPAL3-203ENST00000358028 PRNPP04156 253 aa13.77□□□□□ -0.21
NIPAL3-203ENST00000358028 PRPS1L1P21108 318 aa13.77□□□□□ -0.21
NIPAL3-203ENST00000358028 EEF1B2P24534 225 aaKnown RBP13.77□□□□□ -0.21
NIPAL3-203ENST00000358028 ELK4P28324 431 aa13.77□□□□□ -0.21
NIPAL3-203ENST00000358028 PBLDP30039 288 aaPredicted RBP13.77□□□□□ -0.21
NIPAL3-203ENST00000358028 DCTP40126 519 aa13.77□□□□□ -0.21
NIPAL3-203ENST00000358028 EIF2DP41214 584 aaKnown RBP13.77□□□□□ -0.21
NIPAL3-203ENST00000358028 HNF4AP41235 474 aa13.77□□□□□ -0.21
NIPAL3-203ENST00000358028 MAGEA2P43356 314 aa13.77□□□□□ -0.21
NIPAL3-203ENST00000358028 KIR3DL1P43629 444 aa13.77□□□□□ -0.21
NIPAL3-203ENST00000358028 RAB15P59190 212 aa13.77□□□□□ -0.21
NIPAL3-203ENST00000358028 SERPINA11Q86U17 422 aa13.77□□□□□ -0.21
NIPAL3-203ENST00000358028 C10orf111Q8N326 155 aa13.77□□□□□ -0.21
NIPAL3-203ENST00000358028 OR56A3Q8NH54 315 aa13.77□□□□□ -0.21
NIPAL3-203ENST00000358028 STARD8Q92502 1023 aa13.77□□□□□ -0.21
NIPAL3-203ENST00000358028 PPP1R14BQ96C90 147 aa13.77□□□□□ -0.21
NIPAL3-203ENST00000358028 FOPNLQ96NB1 174 aa13.77□□□□□ -0.21
NIPAL3-203ENST00000358028 GABARAPL1Q9H0R8 117 aa13.77□□□□□ -0.21
NIPAL3-203ENST00000358028 SPATA6Q9NWH7 488 aaPredicted RBP13.77□□□□□ -0.21
NIPAL3-203ENST00000358028 VPS29Q9UBQ0 182 aa13.77□□□□□ -0.21
NIPAL3-203ENST00000358028 SAMD4AQ9UPU9 718 aaKnown RBP13.77□□□□□ -0.21
NIPAL3-203ENST00000358028 RUVBL1Q9Y265 456 aaKnown RBP13.77□□□□□ -0.21
NIPAL3-203ENST00000358028 MUC22E2RYF6 1773 aaPredicted RBP13.77□□□□□ -0.21
NIPAL3-203ENST00000358028 H0YIV9 168 aa13.76□□□□□ -0.21
NIPAL3-203ENST00000358028 RFXANKO14593 260 aa13.76□□□□□ -0.21
NIPAL3-203ENST00000358028 NPC1O15118 1278 aa13.76□□□□□ -0.21
NIPAL3-203ENST00000358028 SLC16A6O15403 523 aa13.76□□□□□ -0.21
NIPAL3-203ENST00000358028 ATE1O95260 518 aa13.76□□□□□ -0.21
NIPAL3-203ENST00000358028 CCNDBP1O95273 360 aa13.76□□□□□ -0.21
NIPAL3-203ENST00000358028 SERPINA1P01009 418 aa13.76□□□□□ -0.21
NIPAL3-203ENST00000358028 ITGAMP11215 1152 aa13.76□□□□□ -0.21
NIPAL3-203ENST00000358028 HSD3B1P14060 373 aa13.76□□□□□ -0.21
NIPAL3-203ENST00000358028 HSD3B2P26439 372 aa13.76□□□□□ -0.21
NIPAL3-203ENST00000358028 IMPA1P29218 277 aa13.76□□□□□ -0.21
NIPAL3-203ENST00000358028 TPD52P55327 224 aaPredicted RBP13.76□□□□□ -0.21
NIPAL3-203ENST00000358028 C21orf58P58505 322 aa13.76□□□□□ -0.21
NIPAL3-203ENST00000358028 SRSF11Q05519 484 aaKnown RBP13.76□□□□□ -0.21
NIPAL3-203ENST00000358028 PCDH1Q08174 1060 aa13.76□□□□□ -0.21
NIPAL3-203ENST00000358028 GAS6Q14393 721 aa13.76□□□□□ -0.21
NIPAL3-203ENST00000358028 NEDD8Q15843 81 aa13.76□□□□□ -0.21
NIPAL3-203ENST00000358028 UGT8Q16880 541 aa13.76□□□□□ -0.21
NIPAL3-203ENST00000358028 DUOXA1Q1HG43 343 aa13.76□□□□□ -0.21
NIPAL3-203ENST00000358028 C6orf141Q5SZD1 244 aa13.76□□□□□ -0.21
NIPAL3-203ENST00000358028 ERICH5Q6P6B1 374 aa13.76□□□□□ -0.21
NIPAL3-203ENST00000358028 TMEM26Q6ZUK4 368 aa13.76□□□□□ -0.21
NIPAL3-203ENST00000358028 NLRP8Q86W28 1048 aa13.76□□□□□ -0.21
NIPAL3-203ENST00000358028 CHDHQ8NE62 594 aaPredicted RBP13.76□□□□□ -0.21
NIPAL3-203ENST00000358028 NETO1Q8TDF5 533 aa13.76□□□□□ -0.21
NIPAL3-203ENST00000358028 RAB2BQ8WUD1 216 aa13.76□□□□□ -0.21
NIPAL3-203ENST00000358028 ARRDC3Q96B67 414 aa13.76□□□□□ -0.21
NIPAL3-203ENST00000358028 THAP11Q96EK4 314 aa13.76□□□□□ -0.21
NIPAL3-203ENST00000358028 OR4K3Q96R72 315 aa13.76□□□□□ -0.21
NIPAL3-203ENST00000358028 SMURF2Q9HAU4 748 aa13.76□□□□□ -0.21
NIPAL3-203ENST00000358028 MAPRE3Q9UPY8 281 aa13.76□□□□□ -0.21
NIPAL3-203ENST00000358028 COQ6Q9Y2Z9 468 aa13.76□□□□□ -0.21
NIPAL3-203ENST00000358028 LRRK1Q38SD2 2015 aa13.76□□□□□ -0.21
NIPAL3-203ENST00000358028 ZFHX2Q9C0A1 2572 aaPredicted RBP13.76□□□□□ -0.21
NIPAL3-203ENST00000358028 A0A0J9YVX5 310 aa13.76□□□□□ -0.21
NIPAL3-203ENST00000358028 EVPLLA8MZ36 301 aa13.76□□□□□ -0.21
NIPAL3-203ENST00000358028 MYO1DO94832 1006 aa13.76□□□□□ -0.21
NIPAL3-203ENST00000358028 KAT7O95251 611 aa13.76□□□□□ -0.21
NIPAL3-203ENST00000358028 MYCLP1P12525 358 aaPredicted RBP13.76□□□□□ -0.21
NIPAL3-203ENST00000358028 DRD1P21728 446 aa13.76□□□□□ -0.21
NIPAL3-203ENST00000358028 ITGB7P26010 798 aa13.76□□□□□ -0.21
NIPAL3-203ENST00000358028 PDHA2P29803 388 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms