RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 CTBSQ01459 385 aa6.6□□□□□ -1.35
RTN4-203ENST00000357376 PPIGQ13427 754 aaKnown RBP eCLIP6.6□□□□□ -1.35
RTN4-203ENST00000357376 AQP6Q13520 282 aa6.6□□□□□ -1.35
RTN4-203ENST00000357376 MAD2L1BPQ15013 274 aaPredicted RBP6.6□□□□□ -1.35
RTN4-203ENST00000357376 EXOC3L2Q2M3D2 409 aa6.6□□□□□ -1.35
RTN4-203ENST00000357376 ADPRMQ3LIE5 342 aa6.6□□□□□ -1.35
RTN4-203ENST00000357376 ELMSAN1Q6PJG2 1045 aa6.6□□□□□ -1.35
RTN4-203ENST00000357376 C17orf99Q6UX52 265 aa6.6□□□□□ -1.35
RTN4-203ENST00000357376 TMCO2Q7Z6W1 182 aaPredicted RBP6.6□□□□□ -1.35
RTN4-203ENST00000357376 SLC7A5P1Q8MH63 180 aa6.6□□□□□ -1.35
RTN4-203ENST00000357376 ZNF614Q8N883 585 aa6.6□□□□□ -1.35
RTN4-203ENST00000357376 LMNTD1Q8N9Z9 388 aa6.6□□□□□ -1.35
RTN4-203ENST00000357376 OR9Q2Q8NGE9 314 aa6.6□□□□□ -1.35
RTN4-203ENST00000357376 DIRAS2Q96HU8 199 aa6.6□□□□□ -1.35
RTN4-203ENST00000357376 MBOAT4Q96T53 435 aa6.6□□□□□ -1.35
RTN4-203ENST00000357376 ZCCHC2Q9C0B9 1178 aaKnown RBP6.6□□□□□ -1.35
RTN4-203ENST00000357376 HDHD2Q9H0R4 259 aa6.6□□□□□ -1.35
RTN4-203ENST00000357376 TMEM245Q9H330 911 aa6.6□□□□□ -1.35
RTN4-203ENST00000357376 ERVK13-1Q9NX77 482 aa6.6□□□□□ -1.35
RTN4-203ENST00000357376 ATP6V1HQ9UI12 483 aa6.6□□□□□ -1.35
RTN4-203ENST00000357376 BCHEP06276 602 aa6.6□□□□□ -1.35
RTN4-203ENST00000357376 CD70P32970 193 aa6.6□□□□□ -1.35
RTN4-203ENST00000357376 ETV3P41162 512 aa6.6□□□□□ -1.35
RTN4-203ENST00000357376 MAGEA8P43361 318 aa6.6□□□□□ -1.35
RTN4-203ENST00000357376 SLC15A1P46059 708 aa6.6□□□□□ -1.35
RTN4-203ENST00000357376 TAS2R50P59544 299 aa6.6□□□□□ -1.35
RTN4-203ENST00000357376 ISL1P61371 349 aa6.6□□□□□ -1.35
RTN4-203ENST00000357376 RPS26P62854 115 aaKnown RBP6.6□□□□□ -1.35
RTN4-203ENST00000357376 PPP2R2BQ00005 443 aa6.6□□□□□ -1.35
RTN4-203ENST00000357376 TARDBPQ13148 414 aaKnown RBP eCLIP6.6□□□□□ -1.353e-9■■■■■ 47
RTN4-203ENST00000357376 ARSIQ5FYB1 569 aa6.6□□□□□ -1.35
RTN4-203ENST00000357376 DCST1Q5T197 706 aa6.6□□□□□ -1.35
RTN4-203ENST00000357376 CRTC1Q6UUV9 634 aa6.6□□□□□ -1.35
RTN4-203ENST00000357376 METTL3Q86U44 580 aaKnown RBP6.6□□□□□ -1.35
RTN4-203ENST00000357376 RTN4RL1Q86UN2 441 aaPredicted RBP6.6□□□□□ -1.35
RTN4-203ENST00000357376 TSPYL5Q86VY4 417 aaPredicted RBP6.6□□□□□ -1.35
RTN4-203ENST00000357376 NAGSQ8N159 534 aa6.6□□□□□ -1.35
RTN4-203ENST00000357376 RAB42Q8N4Z0 105 aa6.6□□□□□ -1.35
RTN4-203ENST00000357376 MINDY2Q8NBR6 621 aa6.6□□□□□ -1.35
RTN4-203ENST00000357376 COL26A1Q96A83 441 aa6.6□□□□□ -1.35
RTN4-203ENST00000357376 MAGEB10Q96LZ2 347 aaPredicted RBP6.6□□□□□ -1.35
RTN4-203ENST00000357376 FAM129BQ96TA1 746 aa6.6□□□□□ -1.35
RTN4-203ENST00000357376 BARD1Q99728 777 aaKnown RBP6.6□□□□□ -1.35
RTN4-203ENST00000357376 CPPED1Q9BRF8 314 aaPredicted RBP6.6□□□□□ -1.35
RTN4-203ENST00000357376 FNDC11Q9BVV2 318 aa6.6□□□□□ -1.35
RTN4-203ENST00000357376 OR51E2Q9H255 320 aa6.6□□□□□ -1.35
RTN4-203ENST00000357376 IL1RAPQ9NPH3 570 aa6.6□□□□□ -1.35
RTN4-203ENST00000357376 EQTNQ9NQ60 294 aa6.6□□□□□ -1.35
RTN4-203ENST00000357376 GULP1Q9UBP9 304 aa6.6□□□□□ -1.35
RTN4-203ENST00000357376 CDH7Q9ULB5 785 aa6.6□□□□□ -1.35
RTN4-203ENST00000357376 POFUT2Q9Y2G5 429 aa6.6□□□□□ -1.35
RTN4-203ENST00000357376 CFAP20Q9Y6A4 193 aaKnown RBP6.6□□□□□ -1.35
RTN4-203ENST00000357376 GRXCR2A6NFK2 248 aa6.6□□□□□ -1.35
RTN4-203ENST00000357376 TSPAN6O43657 245 aa6.6□□□□□ -1.35
RTN4-203ENST00000357376 TLL1O43897 1013 aa6.6□□□□□ -1.35
RTN4-203ENST00000357376 UGT2B17O75795 530 aa6.6□□□□□ -1.35
RTN4-203ENST00000357376 PCDH8O95206 1070 aa6.6□□□□□ -1.35
RTN4-203ENST00000357376 CPNE6O95741 557 aa6.6□□□□□ -1.35
RTN4-203ENST00000357376 STATHP02808 62 aa6.6□□□□□ -1.35
RTN4-203ENST00000357376 CBSLP0DN79 551 aa6.6□□□□□ -1.35
RTN4-203ENST00000357376 EPHA2P29317 976 aa6.6□□□□□ -1.35
RTN4-203ENST00000357376 CBSP35520 551 aa6.6□□□□□ -1.35
RTN4-203ENST00000357376 PPP5CP53041 499 aa6.6□□□□□ -1.35
RTN4-203ENST00000357376 GP2P55259 537 aaKnown RBP6.6□□□□□ -1.35
RTN4-203ENST00000357376 CSNK2BP67870 215 aa6.6□□□□□ -1.35
RTN4-203ENST00000357376 TIAL1Q01085 375 aaKnown RBP eCLIP6.6□□□□□ -1.35
RTN4-203ENST00000357376 DSC1Q08554 894 aa6.6□□□□□ -1.35
RTN4-203ENST00000357376 GPAT3Q53EU6 434 aa6.6□□□□□ -1.35
RTN4-203ENST00000357376 ZNF697Q5TEC3 545 aa6.6□□□□□ -1.35
RTN4-203ENST00000357376 C22orf39Q6P5X5 142 aa6.6□□□□□ -1.35
RTN4-203ENST00000357376 USP30Q70CQ3 517 aa6.6□□□□□ -1.35
RTN4-203ENST00000357376 PRSS48Q7RTY5 328 aa6.6□□□□□ -1.35
RTN4-203ENST00000357376 RIMKLAQ8IXN7 391 aa6.6□□□□□ -1.35
RTN4-203ENST00000357376 RAB8BQ92930 207 aa6.6□□□□□ -1.35
RTN4-203ENST00000357376 FOXJ1Q92949 421 aa6.6□□□□□ -1.35
RTN4-203ENST00000357376 ART5Q96L15 291 aa6.6□□□□□ -1.35
RTN4-203ENST00000357376 COL21A1Q96P44 957 aa6.6□□□□□ -1.35
RTN4-203ENST00000357376 SLC22A12Q96S37 553 aa6.6□□□□□ -1.35
RTN4-203ENST00000357376 PKMYT1Q99640 499 aa6.6□□□□□ -1.35
RTN4-203ENST00000357376 P2RY13Q9BPV8 354 aa6.6□□□□□ -1.35
RTN4-203ENST00000357376 DOHHQ9BU89 302 aa6.6□□□□□ -1.35
RTN4-203ENST00000357376 OR2AG1Q9H205 316 aa6.6□□□□□ -1.35
RTN4-203ENST00000357376 MMP27Q9H306 513 aa6.6□□□□□ -1.35
RTN4-203ENST00000357376 PDFQ9HBH1 243 aa6.6□□□□□ -1.35
RTN4-203ENST00000357376 ACOT13Q9NPJ3 140 aa6.6□□□□□ -1.35
RTN4-203ENST00000357376 TIGARQ9NQ88 270 aa6.6□□□□□ -1.35
RTN4-203ENST00000357376 SLC6A13Q9NSD5 602 aa6.6□□□□□ -1.35
RTN4-203ENST00000357376 LHX3Q9UBR4 397 aa6.6□□□□□ -1.35
RTN4-203ENST00000357376 MAPRE3Q9UPY8 281 aa6.6□□□□□ -1.35
RTN4-203ENST00000357376 PCDHGA10Q9Y5H3 936 aa6.6□□□□□ -1.35
RTN4-203ENST00000357376 SNTNA6NMZ2 147 aa6.59□□□□□ -1.35
RTN4-203ENST00000357376 ZW10O43264 779 aa6.59□□□□□ -1.35
RTN4-203ENST00000357376 DNAJB5O75953 348 aa6.59□□□□□ -1.35
RTN4-203ENST00000357376 NR2F6P10588 404 aa6.59□□□□□ -1.35
RTN4-203ENST00000357376 FEN1P39748 380 aaKnown RBP6.59□□□□□ -1.35
RTN4-203ENST00000357376 CTSOP43234 321 aaPredicted RBP6.59□□□□□ -1.35
RTN4-203ENST00000357376 NR4A2P43354 598 aa6.59□□□□□ -1.35
RTN4-203ENST00000357376 MAPK12P53778 367 aa6.59□□□□□ -1.35
RTN4-203ENST00000357376 TUBA1BP68363 451 aa6.59□□□□□ -1.35
RTN4-203ENST00000357376 GRSF1Q12849 480 aaKnown RBP eCLIP6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms