RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 FAM46DQ8NEK8 389 aa11.39□□□□□ -0.59
COL9A1-202ENST00000357250 OR8H1Q8NGG4 311 aa11.39□□□□□ -0.59
COL9A1-202ENST00000357250 BPIFB1Q8TDL5 484 aa11.39□□□□□ -0.59
COL9A1-202ENST00000357250 MGAT4AQ9UM21 535 aa11.39□□□□□ -0.59
COL9A1-202ENST00000357250 CLCNKAP51800 687 aa11.39□□□□□ -0.59
COL9A1-202ENST00000357250 ARSFP54793 590 aa11.39□□□□□ -0.59
COL9A1-202ENST00000357250 GALNT1Q10472 559 aaPredicted RBP11.39□□□□□ -0.59
COL9A1-202ENST00000357250 TXNDC8Q6A555 127 aa11.39□□□□□ -0.59
COL9A1-202ENST00000357250 TCEAL6Q6IPX3 200 aa11.39□□□□□ -0.59
COL9A1-202ENST00000357250 POMZP3Q6PJE2 187 aa11.39□□□□□ -0.59
COL9A1-202ENST00000357250 SIPA1Q96FS4 1042 aa11.39□□□□□ -0.59
COL9A1-202ENST00000357250 SLC39A3Q9BRY0 314 aa11.39□□□□□ -0.59
COL9A1-202ENST00000357250 CCDC106Q9BWC9 280 aa11.39□□□□□ -0.59
COL9A1-202ENST00000357250 TBL1XR1Q9BZK7 514 aa11.39□□□□□ -0.59
COL9A1-202ENST00000357250 MS4A12Q9NXJ0 267 aa11.39□□□□□ -0.59
COL9A1-202ENST00000357250 NLGN3Q9NZ94 848 aa11.39□□□□□ -0.59
COL9A1-202ENST00000357250 COMMD3Q9UBI1 195 aa11.39□□□□□ -0.59
COL9A1-202ENST00000357250 UTS2RQ9UKP6 389 aa11.39□□□□□ -0.59
COL9A1-202ENST00000357250 RIMKLBQ9ULI2 386 aa11.39□□□□□ -0.59
COL9A1-202ENST00000357250 EXOSC1Q9Y3B2 195 aaKnown RBP11.39□□□□□ -0.59
COL9A1-202ENST00000357250 COL16A1Q07092 1604 aaPredicted RBP11.39□□□□□ -0.59
COL9A1-202ENST00000357250 MYH7P12883 1935 aa11.39□□□□□ -0.59
COL9A1-202ENST00000357250 TSPAN9O75954 239 aa11.39□□□□□ -0.59
COL9A1-202ENST00000357250 TNFP01375 233 aa11.39□□□□□ -0.59
COL9A1-202ENST00000357250 RLN2P04090 185 aa11.39□□□□□ -0.59
COL9A1-202ENST00000357250 EDN1P05305 212 aa11.39□□□□□ -0.59
COL9A1-202ENST00000357250 SLC2A2P11168 524 aaPredicted RBP11.39□□□□□ -0.59
COL9A1-202ENST00000357250 EFNA1P20827 205 aaPredicted RBP11.39□□□□□ -0.59
COL9A1-202ENST00000357250 MAPK3P27361 379 aaPredicted RBP11.39□□□□□ -0.59
COL9A1-202ENST00000357250 BMP8BP34820 402 aa11.39□□□□□ -0.59
COL9A1-202ENST00000357250 OR2B6P58173 313 aa11.39□□□□□ -0.59
COL9A1-202ENST00000357250 DSG2Q14126 1118 aa11.39□□□□□ -0.59
COL9A1-202ENST00000357250 Q6ZVU0 165 aa11.39□□□□□ -0.59
COL9A1-202ENST00000357250 BMP8AQ7Z5Y6 402 aa11.39□□□□□ -0.59
COL9A1-202ENST00000357250 SYVN1Q86TM6 617 aa11.39□□□□□ -0.59
COL9A1-202ENST00000357250 SDR16C5Q8N3Y7 309 aa11.39□□□□□ -0.59
COL9A1-202ENST00000357250 ZNF676Q8N7Q3 588 aa11.39□□□□□ -0.59
COL9A1-202ENST00000357250 RTP4Q96DX8 246 aa11.39□□□□□ -0.59
COL9A1-202ENST00000357250 HIST1H2AAQ96QV6 131 aa11.39□□□□□ -0.59
COL9A1-202ENST00000357250 KCNS3Q9BQ31 491 aa11.39□□□□□ -0.59
COL9A1-202ENST00000357250 NSUN3Q9H649 340 aaKnown RBP11.39□□□□□ -0.59
COL9A1-202ENST00000357250 NKX1-2Q9UD57 310 aaPredicted RBP11.39□□□□□ -0.59
COL9A1-202ENST00000357250 CLEC4AQ9UMR7 237 aa11.39□□□□□ -0.59
COL9A1-202ENST00000357250 ZNF451Q9Y4E5 1061 aa11.39□□□□□ -0.59
COL9A1-202ENST00000357250 PCDHB3Q9Y5E6 796 aa11.39□□□□□ -0.59
COL9A1-202ENST00000357250 MYO5AQ9Y4I1 1855 aaKnown RBP11.38□□□□□ -0.59
COL9A1-202ENST00000357250 PDLIM1O00151 329 aa11.38□□□□□ -0.59
COL9A1-202ENST00000357250 CXCR1P25024 350 aa11.38□□□□□ -0.59
COL9A1-202ENST00000357250 SLC15A1P46059 708 aa11.38□□□□□ -0.59
COL9A1-202ENST00000357250 TMBIM6P55061 237 aa11.38□□□□□ -0.59
COL9A1-202ENST00000357250 CLDN10P78369 228 aa11.38□□□□□ -0.59
COL9A1-202ENST00000357250 ZNF33BQ06732 778 aa11.38□□□□□ -0.59
COL9A1-202ENST00000357250 ENPP2Q13822 863 aa11.38□□□□□ -0.59
COL9A1-202ENST00000357250 GANABQ14697 944 aaKnown RBP11.38□□□□□ -0.59
COL9A1-202ENST00000357250 TLR1Q15399 786 aa11.38□□□□□ -0.59
COL9A1-202ENST00000357250 TPRG1LQ5T0D9 272 aa11.38□□□□□ -0.59
COL9A1-202ENST00000357250 SLC8B1Q6J4K2 584 aa11.38□□□□□ -0.59
COL9A1-202ENST00000357250 RASSF6Q6ZTQ3 369 aa11.38□□□□□ -0.59
COL9A1-202ENST00000357250 MSANTD1Q6ZTZ1 278 aa11.38□□□□□ -0.59
COL9A1-202ENST00000357250 TXNDC5Q8NBS9 432 aaKnown RBP11.38□□□□□ -0.59
COL9A1-202ENST00000357250 BBS10Q8TAM1 723 aa11.38□□□□□ -0.59
COL9A1-202ENST00000357250 OSTF1Q92882 214 aa11.38□□□□□ -0.59
COL9A1-202ENST00000357250 DGAT2Q96PD7 388 aa11.38□□□□□ -0.59
COL9A1-202ENST00000357250 ALPK1Q96QP1 1244 aa11.38□□□□□ -0.59
COL9A1-202ENST00000357250 REEP4Q9H6H4 257 aa11.38□□□□□ -0.59
COL9A1-202ENST00000357250 MEAF6Q9HAF1 191 aa11.38□□□□□ -0.59
COL9A1-202ENST00000357250 TAC3Q9UHF0 121 aa11.38□□□□□ -0.59
COL9A1-202ENST00000357250 CLCA3PQ9Y6N3 262 aa11.38□□□□□ -0.59
COL9A1-202ENST00000357250 GLI3P10071 1580 aa11.38□□□□□ -0.59
COL9A1-202ENST00000357250 FAM170BA6NMN3 283 aa11.38□□□□□ -0.59
COL9A1-202ENST00000357250 SDHDO14521 159 aa11.38□□□□□ -0.59
COL9A1-202ENST00000357250 HTRA2O43464 458 aaPredicted RBP11.38□□□□□ -0.59
COL9A1-202ENST00000357250 DFNA5O60443 496 aa11.38□□□□□ -0.59
COL9A1-202ENST00000357250 BCHEP06276 602 aa11.38□□□□□ -0.59
COL9A1-202ENST00000357250 GNSP15586 552 aa11.38□□□□□ -0.59
COL9A1-202ENST00000357250 ENDOUP21128 410 aaKnown RBP11.38□□□□□ -0.59
COL9A1-202ENST00000357250 SYT16Q17RD7 645 aa11.38□□□□□ -0.59
COL9A1-202ENST00000357250 ZNF404Q494X3 552 aa11.38□□□□□ -0.59
COL9A1-202ENST00000357250 RNF19BQ6ZMZ0 732 aa11.38□□□□□ -0.59
COL9A1-202ENST00000357250 TRIB2Q92519 343 aa11.38□□□□□ -0.59
COL9A1-202ENST00000357250 CPNE2Q96FN4 548 aaPredicted RBP11.38□□□□□ -0.59
COL9A1-202ENST00000357250 CD180Q99467 661 aa11.38□□□□□ -0.59
COL9A1-202ENST00000357250 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.38□□□□□ -0.59
COL9A1-202ENST00000357250 ACTL8Q9H568 366 aa11.38□□□□□ -0.59
COL9A1-202ENST00000357250 CCM2LQ9NUG4 571 aaPredicted RBP11.38□□□□□ -0.59
COL9A1-202ENST00000357250 CNOT11Q9UKZ1 510 aaKnown RBP11.38□□□□□ -0.59
COL9A1-202ENST00000357250 IGKV6-21A0A0C4DH24 114 aa11.38□□□□□ -0.59
COL9A1-202ENST00000357250 IQCMA0A1B0GVH7 501 aa11.38□□□□□ -0.59
COL9A1-202ENST00000357250 AGRPO00253 132 aa11.38□□□□□ -0.59
COL9A1-202ENST00000357250 CPNE3O75131 537 aaKnown RBP11.38□□□□□ -0.59
COL9A1-202ENST00000357250 CLPXO76031 633 aa11.38□□□□□ -0.59
COL9A1-202ENST00000357250 ARHGEF15O94989 841 aa11.38□□□□□ -0.59
COL9A1-202ENST00000357250 GPM6BQ13491 265 aa11.38□□□□□ -0.59
COL9A1-202ENST00000357250 TRAM2Q15035 370 aa11.38□□□□□ -0.59
COL9A1-202ENST00000357250 PON3Q15166 354 aa11.38□□□□□ -0.59
COL9A1-202ENST00000357250 CYBRD1Q53TN4 286 aa11.38□□□□□ -0.59
COL9A1-202ENST00000357250 EOGTQ5NDL2 527 aa11.38□□□□□ -0.59
COL9A1-202ENST00000357250 ENPP7Q6UWV6 458 aa11.38□□□□□ -0.59
COL9A1-202ENST00000357250 MINDY1Q8N5J2 469 aa11.38□□□□□ -0.59
COL9A1-202ENST00000357250 OR6K6Q8NGW6 343 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms