RNA–Protein interactions for RNA: ENST00000356090.8

NCDN-201, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,433 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-201ENST00000356090 DYRK3O43781 588 aa12.89□□□□□ -0.35
NCDN-201ENST00000356090 AMD1P17707 334 aa12.89□□□□□ -0.35
NCDN-201ENST00000356090 CASP3P42574 277 aa12.89□□□□□ -0.35
NCDN-201ENST00000356090 CXCR4P61073 352 aa12.89□□□□□ -0.35
NCDN-201ENST00000356090 RUNX1T1Q06455 604 aa12.89□□□□□ -0.35
NCDN-201ENST00000356090 DSC1Q08554 894 aa12.89□□□□□ -0.35
NCDN-201ENST00000356090 LRIF1Q5T3J3 769 aa12.89□□□□□ -0.35
NCDN-201ENST00000356090 THOC7Q6I9Y2 204 aaKnown RBP12.89□□□□□ -0.35
NCDN-201ENST00000356090 ERICH5Q6P6B1 374 aa12.89□□□□□ -0.35
NCDN-201ENST00000356090 C11orf65Q8NCR3 313 aa12.89□□□□□ -0.35
NCDN-201ENST00000356090 PIH1D2Q8WWB5 315 aa12.89□□□□□ -0.35
NCDN-201ENST00000356090 USP7Q93009 1102 aa12.89□□□□□ -0.35
NCDN-201ENST00000356090 P2RY13Q9BPV8 354 aa12.89□□□□□ -0.35
NCDN-201ENST00000356090 C2orf49Q9BVC5 232 aaPredicted RBP12.89□□□□□ -0.35
NCDN-201ENST00000356090 TRIM39Q9HCM9 518 aa12.89□□□□□ -0.35
NCDN-201ENST00000356090 SLC6A14Q9UN76 642 aa12.89□□□□□ -0.35
NCDN-201ENST00000356090 Q9Y3F1 56 aa12.89□□□□□ -0.35
NCDN-201ENST00000356090 PCDHGB1Q9Y5G3 927 aa12.89□□□□□ -0.35
NCDN-201ENST00000356090 CLCA1A8K7I4 914 aa12.89□□□□□ -0.35
NCDN-201ENST00000356090 CD160O95971 181 aa12.89□□□□□ -0.35
NCDN-201ENST00000356090 CCND3P30281 292 aaPredicted RBP12.89□□□□□ -0.35
NCDN-201ENST00000356090 ZNF181Q2M3W8 571 aa12.89□□□□□ -0.35
NCDN-201ENST00000356090 FAM214AQ32MH5 1076 aa12.89□□□□□ -0.35
NCDN-201ENST00000356090 IER5LQ5T953 404 aa12.89□□□□□ -0.35
NCDN-201ENST00000356090 GDPD3Q7L5L3 318 aa12.89□□□□□ -0.35
NCDN-201ENST00000356090 ZSWIM9Q86XI8 627 aa12.89□□□□□ -0.35
NCDN-201ENST00000356090 GPR65Q8IYL9 337 aa12.89□□□□□ -0.35
NCDN-201ENST00000356090 CYP4Z2PQ8N1L4 340 aa12.89□□□□□ -0.35
NCDN-201ENST00000356090 NFKBIDQ8NI38 313 aa12.89□□□□□ -0.35
NCDN-201ENST00000356090 SCAMP4Q969E2 229 aa12.89□□□□□ -0.35
NCDN-201ENST00000356090 PKP4Q99569 1192 aa12.89□□□□□ -0.35
NCDN-201ENST00000356090 TTYH2Q9BSA4 534 aa12.89□□□□□ -0.35
NCDN-201ENST00000356090 HTATIP2Q9BUP3 242 aa12.89□□□□□ -0.35
NCDN-201ENST00000356090 CDADC1Q9BWV3 514 aa12.89□□□□□ -0.35
NCDN-201ENST00000356090 BRD9Q9H8M2 597 aa12.89□□□□□ -0.35
NCDN-201ENST00000356090 QPCTLQ9NXS2 382 aa12.89□□□□□ -0.35
NCDN-201ENST00000356090 LAMA3Q16787 3333 aa12.89□□□□□ -0.35
NCDN-201ENST00000356090 MYO10Q9HD67 2058 aa12.89□□□□□ -0.35
NCDN-201ENST00000356090 CLDN24A6NM45 220 aa12.88□□□□□ -0.35
NCDN-201ENST00000356090 AP3D1O14617 1153 aa12.88□□□□□ -0.35
NCDN-201ENST00000356090 CSF2P04141 144 aa12.88□□□□□ -0.35
NCDN-201ENST00000356090 ADORA3P0DMS8 318 aa12.88□□□□□ -0.35
NCDN-201ENST00000356090 SERPINA4P29622 427 aa12.88□□□□□ -0.35
NCDN-201ENST00000356090 HOXC8P31273 242 aa12.88□□□□□ -0.35
NCDN-201ENST00000356090 SRSF11Q05519 484 aaKnown RBP12.88□□□□□ -0.35
NCDN-201ENST00000356090 STARD3Q14849 445 aa12.88□□□□□ -0.35
NCDN-201ENST00000356090 ZFP69Q49AA0 526 aa12.88□□□□□ -0.35
NCDN-201ENST00000356090 BCL7AQ4VC05 210 aa12.88□□□□□ -0.35
NCDN-201ENST00000356090 TXNDC8Q6A555 127 aa12.88□□□□□ -0.35
NCDN-201ENST00000356090 PTOV1Q86YD1 416 aa12.88□□□□□ -0.35
NCDN-201ENST00000356090 C2orf73Q8N5S3 287 aaPredicted RBP12.88□□□□□ -0.35
NCDN-201ENST00000356090 DBF4BQ8NFT6 615 aa12.88□□□□□ -0.35
NCDN-201ENST00000356090 APH1BQ8WW43 257 aa12.88□□□□□ -0.35
NCDN-201ENST00000356090 UPF1Q92900 1129 aaKnown RBP eCLIP12.88□□□□□ -0.351e-6■■■■□ 22.5
NCDN-201ENST00000356090 TRNT1Q96Q11 434 aaKnown RBP12.88□□□□□ -0.35
NCDN-201ENST00000356090 SLC22A12Q96S37 553 aa12.88□□□□□ -0.35
NCDN-201ENST00000356090 MBD1Q9UIS9 605 aaPredicted RBP12.88□□□□□ -0.35
NCDN-201ENST00000356090 KLHL20Q9Y2M5 609 aa12.88□□□□□ -0.35
NCDN-201ENST00000356090 PEX16Q9Y5Y5 336 aa12.88□□□□□ -0.35
NCDN-201ENST00000356090 CKBP12277 381 aa12.88□□□□□ -0.35
NCDN-201ENST00000356090 GPR162Q16538 588 aa12.88□□□□□ -0.35
NCDN-201ENST00000356090 TRAF7Q6Q0C0 670 aa12.88□□□□□ -0.35
NCDN-201ENST00000356090 CBLL1Q75N03 491 aa12.88□□□□□ -0.35
NCDN-201ENST00000356090 SERPINA11Q86U17 422 aa12.88□□□□□ -0.35
NCDN-201ENST00000356090 FCGR1BQ92637 280 aa12.88□□□□□ -0.35
NCDN-201ENST00000356090 MGLLQ99685 303 aa12.88□□□□□ -0.35
NCDN-201ENST00000356090 HSPE1-MOB4S4R3N1 261 aa12.88□□□□□ -0.35
NCDN-201ENST00000356090 MYO7AQ13402 2215 aa12.88□□□□□ -0.35
NCDN-201ENST00000356090 H7C0S8 307 aa12.88□□□□□ -0.35
NCDN-201ENST00000356090 SOX3P41225 446 aa12.88□□□□□ -0.35
NCDN-201ENST00000356090 TGM4P49221 684 aa12.88□□□□□ -0.35
NCDN-201ENST00000356090 RGS6P49758 472 aa12.88□□□□□ -0.35
NCDN-201ENST00000356090 ITGA1P56199 1179 aa12.88□□□□□ -0.35
NCDN-201ENST00000356090 DGKKQ5KSL6 1271 aa12.88□□□□□ -0.35
NCDN-201ENST00000356090 TMPRSS11BQ86T26 416 aa12.88□□□□□ -0.35
NCDN-201ENST00000356090 DNAJC22Q8N4W6 341 aa12.88□□□□□ -0.35
NCDN-201ENST00000356090 B3GNT7Q8NFL0 401 aa12.88□□□□□ -0.35
NCDN-201ENST00000356090 C17orf50Q8WW18 174 aa12.88□□□□□ -0.35
NCDN-201ENST00000356090 SOCS4Q8WXH5 440 aa12.88□□□□□ -0.35
NCDN-201ENST00000356090 MYLIPQ8WY64 445 aa12.88□□□□□ -0.35
NCDN-201ENST00000356090 BCL7BQ9BQE9 202 aa12.88□□□□□ -0.35
NCDN-201ENST00000356090 SP140LQ9H930 580 aa12.88□□□□□ -0.35
NCDN-201ENST00000356090 ABCB9Q9NP78 766 aa12.88□□□□□ -0.35
NCDN-201ENST00000356090 DNAJC27Q9NZQ0 273 aa12.88□□□□□ -0.35
NCDN-201ENST00000356090 IFT52Q9Y366 437 aa12.88□□□□□ -0.35
NCDN-201ENST00000356090 DNMT3AQ9Y6K1 912 aaPredicted RBP12.88□□□□□ -0.35
NCDN-201ENST00000356090 DICER1Q9UPY3 1922 aaKnown RBP12.87□□□□□ -0.35
NCDN-201ENST00000356090 ISPDA4D126 451 aa12.87□□□□□ -0.35
NCDN-201ENST00000356090 CENPXA8MT69 81 aa12.87□□□□□ -0.35
NCDN-201ENST00000356090 E7EQ34 232 aa12.87□□□□□ -0.35
NCDN-201ENST00000356090 TPST2O60704 377 aa12.87□□□□□ -0.35
NCDN-201ENST00000356090 APOL3O95236 402 aa12.87□□□□□ -0.35
NCDN-201ENST00000356090 IGSF6O95976 241 aa12.87□□□□□ -0.35
NCDN-201ENST00000356090 PREPP48147 710 aa12.87□□□□□ -0.35
NCDN-201ENST00000356090 GZMMP51124 257 aa12.87□□□□□ -0.35
NCDN-201ENST00000356090 CDC42P60953 191 aa12.87□□□□□ -0.35
NCDN-201ENST00000356090 CYP4F8P98187 520 aa12.87□□□□□ -0.35
NCDN-201ENST00000356090 VEPH1Q14D04 833 aa12.87□□□□□ -0.35
NCDN-201ENST00000356090 ZNF852Q6ZMS4 543 aa12.87□□□□□ -0.35
NCDN-201ENST00000356090 NRARPQ7Z6K4 114 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms