RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 HTR1EP28566 365 aa13.39□□□□□ -0.27
TRIM4-201ENST00000349062 CLCN2P51788 898 aa13.39□□□□□ -0.27
TRIM4-201ENST00000349062 PLA2G16P53816 162 aa13.39□□□□□ -0.27
TRIM4-201ENST00000349062 MAPK11Q15759 364 aa13.39□□□□□ -0.27
TRIM4-201ENST00000349062 UGT8Q16880 541 aa13.39□□□□□ -0.27
TRIM4-201ENST00000349062 WASH2PQ6VEQ5 465 aa13.39□□□□□ -0.27
TRIM4-201ENST00000349062 SPPL2AQ8TCT8 520 aa13.39□□□□□ -0.27
TRIM4-201ENST00000349062 PPP1R16AQ96I34 528 aa13.39□□□□□ -0.27
TRIM4-201ENST00000349062 COG8Q96MW5 612 aa13.39□□□□□ -0.27
TRIM4-201ENST00000349062 SLC29A3Q9BZD2 475 aa13.39□□□□□ -0.27
TRIM4-201ENST00000349062 TMEM245Q9H330 911 aa13.39□□□□□ -0.27
TRIM4-201ENST00000349062 RMI1Q9H9A7 625 aa13.39□□□□□ -0.27
TRIM4-201ENST00000349062 PRSS16Q9NQE7 514 aa13.39□□□□□ -0.27
TRIM4-201ENST00000349062 SMPD3Q9NY59 655 aaPredicted RBP13.39□□□□□ -0.27
TRIM4-201ENST00000349062 DAPK2Q9UIK4 370 aa13.39□□□□□ -0.27
TRIM4-201ENST00000349062 CARNS1A5YM72 827 aa13.39□□□□□ -0.27
TRIM4-201ENST00000349062 GLOD5A6NK44 160 aa13.39□□□□□ -0.27
TRIM4-201ENST00000349062 BCL10O95999 233 aa13.39□□□□□ -0.27
TRIM4-201ENST00000349062 BMP2P12643 396 aa13.39□□□□□ -0.27
TRIM4-201ENST00000349062 ACPPP15309 386 aa13.39□□□□□ -0.27
TRIM4-201ENST00000349062 PORP16435 677 aaPredicted RBP13.39□□□□□ -0.27
TRIM4-201ENST00000349062 GGT1P19440 569 aa13.39□□□□□ -0.27
TRIM4-201ENST00000349062 OR1E2P47887 323 aa13.39□□□□□ -0.27
TRIM4-201ENST00000349062 PRLHRP49683 370 aa13.39□□□□□ -0.27
TRIM4-201ENST00000349062 FOXM1Q08050 763 aa13.39□□□□□ -0.27
TRIM4-201ENST00000349062 PPP4R4Q6NUP7 873 aa13.39□□□□□ -0.27
TRIM4-201ENST00000349062 MED27Q6P2C8 311 aa13.39□□□□□ -0.27
TRIM4-201ENST00000349062 ZNF852Q6ZMS4 543 aa13.39□□□□□ -0.27
TRIM4-201ENST00000349062 AMZ2Q86W34 360 aa13.39□□□□□ -0.27
TRIM4-201ENST00000349062 PROSER1Q86XN7 944 aa13.39□□□□□ -0.27
TRIM4-201ENST00000349062 TCAIMQ8N3R3 496 aa13.39□□□□□ -0.27
TRIM4-201ENST00000349062 SLC15A4Q8N697 577 aa13.39□□□□□ -0.27
TRIM4-201ENST00000349062 NELL1Q92832 810 aa13.39□□□□□ -0.27
TRIM4-201ENST00000349062 BORCS5Q969J3 196 aa13.39□□□□□ -0.27
TRIM4-201ENST00000349062 OTUB2Q96DC9 234 aa13.39□□□□□ -0.27
TRIM4-201ENST00000349062 CMTM7Q96FZ5 175 aa13.39□□□□□ -0.27
TRIM4-201ENST00000349062 DUSP26Q9BV47 211 aa13.39□□□□□ -0.27
TRIM4-201ENST00000349062 MCOLN1Q9GZU1 580 aa13.39□□□□□ -0.27
TRIM4-201ENST00000349062 KLHL25Q9H0H3 589 aa13.39□□□□□ -0.27
TRIM4-201ENST00000349062 RIBC2Q9H4K1 309 aa13.39□□□□□ -0.27
TRIM4-201ENST00000349062 PCDHB3Q9Y5E6 796 aa13.39□□□□□ -0.27
TRIM4-201ENST00000349062 GABRR3A8MPY1 467 aa13.38□□□□□ -0.27
TRIM4-201ENST00000349062 KDM1AO60341 852 aa13.38□□□□□ -0.27
TRIM4-201ENST00000349062 MAPK1P28482 360 aa13.38□□□□□ -0.27
TRIM4-201ENST00000349062 CD97P48960 835 aa13.38□□□□□ -0.27
TRIM4-201ENST00000349062 PTPN5P54829 565 aa13.38□□□□□ -0.27
TRIM4-201ENST00000349062 TAS2R50P59544 299 aa13.38□□□□□ -0.27
TRIM4-201ENST00000349062 NHSL2Q5HYW2 709 aa13.38□□□□□ -0.27
TRIM4-201ENST00000349062 ZNF548Q8NEK5 533 aaPredicted RBP13.38□□□□□ -0.27
TRIM4-201ENST00000349062 OR4A15Q8NGL6 344 aa13.38□□□□□ -0.27
TRIM4-201ENST00000349062 STON2Q8WXE9 905 aa13.38□□□□□ -0.27
TRIM4-201ENST00000349062 FERD3LQ96RJ6 166 aa13.38□□□□□ -0.27
TRIM4-201ENST00000349062 FANCEQ9HB96 536 aa13.38□□□□□ -0.27
TRIM4-201ENST00000349062 AASDHPPTQ9NRN7 309 aa13.38□□□□□ -0.27
TRIM4-201ENST00000349062 CUEDC1Q9NWM3 386 aaPredicted RBP13.38□□□□□ -0.27
TRIM4-201ENST00000349062 ERVK-11Q9UQG0 969 aa13.38□□□□□ -0.27
TRIM4-201ENST00000349062 CORINQ9Y5Q5 1042 aa13.38□□□□□ -0.27
TRIM4-201ENST00000349062 KIAA1671Q9BY89 1806 aa13.38□□□□□ -0.27
TRIM4-201ENST00000349062 PTPRSQ13332 1948 aa13.38□□□□□ -0.27
TRIM4-201ENST00000349062 DENND4CQ5VZ89 1909 aa13.38□□□□□ -0.27
TRIM4-201ENST00000349062 C1QTNF3-AMACRE9PGA6 284 aa13.38□□□□□ -0.27
TRIM4-201ENST00000349062 NME6O75414 186 aaPredicted RBP13.38□□□□□ -0.27
TRIM4-201ENST00000349062 SOD1P00441 154 aa13.38□□□□□ -0.27
TRIM4-201ENST00000349062 MPC1LP0DKB6 136 aa13.38□□□□□ -0.27
TRIM4-201ENST00000349062 ELP6Q0PNE2 266 aa13.38□□□□□ -0.27
TRIM4-201ENST00000349062 GRIK2Q13002 908 aa13.38□□□□□ -0.27
TRIM4-201ENST00000349062 ANKFN1Q8N957 763 aa13.38□□□□□ -0.27
TRIM4-201ENST00000349062 ZNF557Q8N988 423 aaPredicted RBP13.38□□□□□ -0.27
TRIM4-201ENST00000349062 ATL1Q8WXF7 558 aa13.38□□□□□ -0.27
TRIM4-201ENST00000349062 BARD1Q99728 777 aaKnown RBP13.38□□□□□ -0.27
TRIM4-201ENST00000349062 ZCCHC2Q9C0B9 1178 aaKnown RBP13.38□□□□□ -0.27
TRIM4-201ENST00000349062 SACM1LQ9NTJ5 587 aa13.38□□□□□ -0.27
TRIM4-201ENST00000349062 STON1Q9Y6Q2 735 aa13.38□□□□□ -0.27
TRIM4-201ENST00000349062 CKAP5Q14008 2032 aa13.38□□□□□ -0.27
TRIM4-201ENST00000349062 CCDC88CQ9P219 2028 aa13.38□□□□□ -0.27
TRIM4-201ENST00000349062 PPM1DO15297 605 aa13.38□□□□□ -0.27
TRIM4-201ENST00000349062 RAP2AP10114 183 aa13.38□□□□□ -0.27
TRIM4-201ENST00000349062 RUNDC3AQ59EK9 446 aa13.38□□□□□ -0.27
TRIM4-201ENST00000349062 KIAA1211LQ6NV74 962 aa13.38□□□□□ -0.27
TRIM4-201ENST00000349062 DCDC5Q6ZRR9 648 aa13.38□□□□□ -0.27
TRIM4-201ENST00000349062 ZNF551Q7Z340 670 aaPredicted RBP13.38□□□□□ -0.27
TRIM4-201ENST00000349062 DPP10Q8N608 796 aa13.38□□□□□ -0.27
TRIM4-201ENST00000349062 DOK4Q8TEW6 326 aa13.38□□□□□ -0.27
TRIM4-201ENST00000349062 TFAP2CQ92754 450 aa13.38□□□□□ -0.27
TRIM4-201ENST00000349062 MYADMQ96S97 322 aa13.38□□□□□ -0.27
TRIM4-201ENST00000349062 CD93Q9NPY3 652 aa13.38□□□□□ -0.27
TRIM4-201ENST00000349062 CCDC177Q9NQR7 707 aaPredicted RBP13.38□□□□□ -0.27
TRIM4-201ENST00000349062 SLC5A10A0PJK1 596 aa13.37□□□□□ -0.27
TRIM4-201ENST00000349062 C6orf47O95873 294 aa13.37□□□□□ -0.27
TRIM4-201ENST00000349062 SRPRAP08240 638 aaKnown RBP13.37□□□□□ -0.27
TRIM4-201ENST00000349062 ETFBKMTQ8IXQ9 262 aa13.37□□□□□ -0.27
TRIM4-201ENST00000349062 LEMD2Q8NC56 503 aa13.37□□□□□ -0.27
TRIM4-201ENST00000349062 C12orf66Q96MD2 445 aa13.37□□□□□ -0.27
TRIM4-201ENST00000349062 F2RL3Q96RI0 385 aa13.37□□□□□ -0.27
TRIM4-201ENST00000349062 UGT2B28Q9BY64 529 aa13.37□□□□□ -0.27
TRIM4-201ENST00000349062 KAT8Q9H7Z6 458 aaKnown RBP13.37□□□□□ -0.27
TRIM4-201ENST00000349062 MIEF1Q9NQG6 463 aa13.37□□□□□ -0.27
TRIM4-201ENST00000349062 FBXL12Q9NXK8 326 aa13.37□□□□□ -0.27
TRIM4-201ENST00000349062 DPP7Q9UHL4 492 aa13.37□□□□□ -0.27
TRIM4-201ENST00000349062 PCDHGA11Q9Y5H2 935 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms