RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 TPPPO94811 219 aa8.89□□□□□ -0.99
ATG4A-202ENST00000345734 ETHE1O95571 254 aa8.89□□□□□ -0.99
ATG4A-202ENST00000345734 ASGR2P07307 311 aa8.89□□□□□ -0.99
ATG4A-202ENST00000345734 C8BP07358 591 aa8.89□□□□□ -0.99
ATG4A-202ENST00000345734 PCNAP12004 261 aa8.89□□□□□ -0.99
ATG4A-202ENST00000345734 AMD1P17707 334 aa8.89□□□□□ -0.99
ATG4A-202ENST00000345734 SDC1P18827 310 aa8.89□□□□□ -0.99
ATG4A-202ENST00000345734 IGFALSP35858 605 aa8.89□□□□□ -0.99
ATG4A-202ENST00000345734 CCR3P51677 355 aa8.89□□□□□ -0.99
ATG4A-202ENST00000345734 PNLIPRP1P54315 467 aa8.89□□□□□ -0.99
ATG4A-202ENST00000345734 TAP2Q03519 686 aa8.89□□□□□ -0.99
ATG4A-202ENST00000345734 GRSF1Q12849 480 aaKnown RBP eCLIP8.89□□□□□ -0.99
ATG4A-202ENST00000345734 NANOGP8Q6NSW7 305 aa8.89□□□□□ -0.99
ATG4A-202ENST00000345734 SLCO4C1Q6ZQN7 724 aa8.89□□□□□ -0.99
ATG4A-202ENST00000345734 CHST15Q7LFX5 561 aaPredicted RBP8.89□□□□□ -0.99
ATG4A-202ENST00000345734 IFNEQ86WN2 208 aa8.89□□□□□ -0.99
ATG4A-202ENST00000345734 HORMAD1Q86X24 394 aa8.89□□□□□ -0.99
ATG4A-202ENST00000345734 LSRQ86X29 649 aaPredicted RBP8.89□□□□□ -0.99
ATG4A-202ENST00000345734 LILRA2Q8N149 483 aa8.89□□□□□ -0.99
ATG4A-202ENST00000345734 PQLC1Q8N2U9 271 aa8.89□□□□□ -0.99
ATG4A-202ENST00000345734 TFGQ92734 400 aaPredicted RBP8.89□□□□□ -0.99
ATG4A-202ENST00000345734 NAF1Q96HR8 494 aaKnown RBP8.89□□□□□ -0.99
ATG4A-202ENST00000345734 EGLN2Q96KS0 407 aa8.89□□□□□ -0.99
ATG4A-202ENST00000345734 MAGEB10Q96LZ2 347 aaPredicted RBP8.89□□□□□ -0.99
ATG4A-202ENST00000345734 SGPP1Q9BX95 441 aa8.89□□□□□ -0.99
ATG4A-202ENST00000345734 CLMPQ9H6B4 373 aa8.89□□□□□ -0.99
ATG4A-202ENST00000345734 COPS7BQ9H9Q2 264 aaPredicted RBP8.89□□□□□ -0.99
ATG4A-202ENST00000345734 NANOGQ9H9S0 305 aa8.89□□□□□ -0.99
ATG4A-202ENST00000345734 PLEKHM1Q9Y4G2 1056 aa8.89□□□□□ -0.99
ATG4A-202ENST00000345734 NEUROG3Q9Y4Z2 214 aa8.89□□□□□ -0.99
ATG4A-202ENST00000345734 KCNE2Q9Y6J6 123 aa8.89□□□□□ -0.99
ATG4A-202ENST00000345734 PRSS51A0A1B0GVH4 220 aa8.89□□□□□ -0.99
ATG4A-202ENST00000345734 DYTNA2CJ06 578 aa8.89□□□□□ -0.99
ATG4A-202ENST00000345734 MAGEB17A8MXT2 336 aa8.89□□□□□ -0.99
ATG4A-202ENST00000345734 H0YIV9 168 aa8.89□□□□□ -0.99
ATG4A-202ENST00000345734 SCAMP1O15126 338 aa8.89□□□□□ -0.99
ATG4A-202ENST00000345734 KMOO15229 486 aa8.89□□□□□ -0.99
ATG4A-202ENST00000345734 NARSO43776 548 aaKnown RBP8.89□□□□□ -0.99
ATG4A-202ENST00000345734 LRATO95237 230 aa8.89□□□□□ -0.99
ATG4A-202ENST00000345734 PGRP06401 933 aa8.89□□□□□ -0.99
ATG4A-202ENST00000345734 ACP5P13686 325 aa8.89□□□□□ -0.99
ATG4A-202ENST00000345734 HSD17B1P14061 328 aa8.89□□□□□ -0.99
ATG4A-202ENST00000345734 DRD1P21728 446 aa8.89□□□□□ -0.99
ATG4A-202ENST00000345734 CD72P21854 359 aa8.89□□□□□ -0.99
ATG4A-202ENST00000345734 HNF4AP41235 474 aa8.89□□□□□ -0.99
ATG4A-202ENST00000345734 MAP2K3P46734 347 aa8.89□□□□□ -0.99
ATG4A-202ENST00000345734 GSK3BP49841 420 aa8.89□□□□□ -0.99
ATG4A-202ENST00000345734 MTPNP58546 118 aa8.89□□□□□ -0.99
ATG4A-202ENST00000345734 PHC1P78364 1004 aa8.89□□□□□ -0.99
ATG4A-202ENST00000345734 MEF2AQ02078 507 aaPredicted RBP8.89□□□□□ -0.99
ATG4A-202ENST00000345734 LIPEQ05469 1076 aa8.89□□□□□ -0.99
ATG4A-202ENST00000345734 RPA4Q13156 261 aa8.89□□□□□ -0.99
ATG4A-202ENST00000345734 TRIP10Q15642 601 aa8.89□□□□□ -0.99
ATG4A-202ENST00000345734 TMEM31Q5JXX7 168 aa8.89□□□□□ -0.99
ATG4A-202ENST00000345734 KIAA1161Q6NSJ0 714 aa8.89□□□□□ -0.99
ATG4A-202ENST00000345734 NOXRED1Q6NXP6 359 aa8.89□□□□□ -0.99
ATG4A-202ENST00000345734 DUS1LQ6P1R4 473 aaKnown RBP8.89□□□□□ -0.99
ATG4A-202ENST00000345734 ZFP1Q6P2D0 407 aa8.89□□□□□ -0.99
ATG4A-202ENST00000345734 IZUMO2Q6UXV1 221 aa8.89□□□□□ -0.99
ATG4A-202ENST00000345734 UNC5DQ6UXZ4 953 aa8.89□□□□□ -0.99
ATG4A-202ENST00000345734 DHFR2Q86XF0 187 aa8.89□□□□□ -0.99
ATG4A-202ENST00000345734 HID1Q8IV36 788 aa8.89□□□□□ -0.99
ATG4A-202ENST00000345734 ARL10Q8N8L6 244 aa8.89□□□□□ -0.99
ATG4A-202ENST00000345734 OR7G3Q8NG95 312 aa8.89□□□□□ -0.99
ATG4A-202ENST00000345734 RPLP0P6Q8NHW5 317 aa8.89□□□□□ -0.99
ATG4A-202ENST00000345734 HUS1BQ8NHY5 278 aa8.89□□□□□ -0.99
ATG4A-202ENST00000345734 FAM110BQ8TC76 370 aa8.89□□□□□ -0.99
ATG4A-202ENST00000345734 SLC13A3Q8WWT9 602 aa8.89□□□□□ -0.99
ATG4A-202ENST00000345734 GTF2H4Q92759 462 aa8.89□□□□□ -0.99
ATG4A-202ENST00000345734 GFM2Q969S9 779 aaKnown RBP8.89□□□□□ -0.99
ATG4A-202ENST00000345734 SLCO4A1Q96BD0 722 aa8.89□□□□□ -0.99
ATG4A-202ENST00000345734 SIPA1Q96FS4 1042 aa8.89□□□□□ -0.99
ATG4A-202ENST00000345734 DEPDC7Q96QD5 511 aa8.89□□□□□ -0.99
ATG4A-202ENST00000345734 PKP2Q99959 881 aa8.89□□□□□ -0.99
ATG4A-202ENST00000345734 SPNS1Q9H2V7 528 aa8.89□□□□□ -0.99
ATG4A-202ENST00000345734 CCDC86Q9H6F5 360 aaKnown RBP8.89□□□□□ -0.99
ATG4A-202ENST00000345734 PHPT1Q9NRX4 125 aaPredicted RBP8.89□□□□□ -0.99
ATG4A-202ENST00000345734 SPATA6Q9NWH7 488 aaPredicted RBP8.89□□□□□ -0.99
ATG4A-202ENST00000345734 GPRC5BQ9NZH0 403 aa8.89□□□□□ -0.99
ATG4A-202ENST00000345734 SNRNP200O75643 2136 aaKnown RBP8.88□□□□□ -0.99
ATG4A-202ENST00000345734 TCRBV3S1A0A5B6 114 aa8.88□□□□□ -0.99
ATG4A-202ENST00000345734 SHISA7A6NL88 538 aa8.88□□□□□ -0.99
ATG4A-202ENST00000345734 ZNF839A8K0R7 811 aa8.88□□□□□ -0.99
ATG4A-202ENST00000345734 NPIPB8E9PQR5 432 aa8.88□□□□□ -0.99
ATG4A-202ENST00000345734 DFNA5O60443 496 aa8.88□□□□□ -0.99
ATG4A-202ENST00000345734 CEACAM5P06731 702 aa8.88□□□□□ -0.99
ATG4A-202ENST00000345734 EPXP11678 715 aa8.88□□□□□ -0.99
ATG4A-202ENST00000345734 MYCLP1P12525 358 aaPredicted RBP8.88□□□□□ -0.99
ATG4A-202ENST00000345734 ACADSP16219 412 aa8.88□□□□□ -0.99
ATG4A-202ENST00000345734 ATP6V1C1P21283 382 aa8.88□□□□□ -0.99
ATG4A-202ENST00000345734 TEAD1P28347 426 aa8.88□□□□□ -0.99
ATG4A-202ENST00000345734 GRIA3P42263 894 aa8.88□□□□□ -0.99
ATG4A-202ENST00000345734 CLCNKAP51800 687 aa8.88□□□□□ -0.99
ATG4A-202ENST00000345734 CLDN8P56748 225 aa8.88□□□□□ -0.99
ATG4A-202ENST00000345734 RHDQ02161 417 aa8.88□□□□□ -0.99
ATG4A-202ENST00000345734 RPL6Q02878 288 aaKnown RBP8.88□□□□□ -0.99
ATG4A-202ENST00000345734 CSTF3Q12996 717 aaKnown RBP8.88□□□□□ -0.99
ATG4A-202ENST00000345734 SLBPQ14493 270 aaKnown RBP eCLIP8.88□□□□□ -0.99
ATG4A-202ENST00000345734 SFT2D3Q587I9 215 aa8.88□□□□□ -0.99
ATG4A-202ENST00000345734 SPPL2CQ8IUH8 684 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms