RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 RGS4P49798 205 aa9.33□□□□□ -0.92
HOXA1-201ENST00000343060 RORCP51449 518 aa9.33□□□□□ -0.92
HOXA1-201ENST00000343060 CACNG1Q06432 222 aa9.33□□□□□ -0.92
HOXA1-201ENST00000343060 DALRD3Q5D0E6 543 aaKnown RBP9.33□□□□□ -0.92
HOXA1-201ENST00000343060 PLAG1Q6DJT9 500 aa9.33□□□□□ -0.92
HOXA1-201ENST00000343060 OVOS1Q6IE37 1185 aa9.33□□□□□ -0.92
HOXA1-201ENST00000343060 IDO2Q6ZQW0 420 aa9.33□□□□□ -0.92
HOXA1-201ENST00000343060 CREB3L2Q70SY1 520 aa9.33□□□□□ -0.92
HOXA1-201ENST00000343060 GDPD1Q8N9F7 314 aa9.33□□□□□ -0.92
HOXA1-201ENST00000343060 OR4M1Q8NGD0 313 aa9.33□□□□□ -0.92
HOXA1-201ENST00000343060 GPR152Q8TDT2 470 aa9.33□□□□□ -0.92
HOXA1-201ENST00000343060 ULK4Q96C45 1275 aa9.33□□□□□ -0.92
HOXA1-201ENST00000343060 MYEOVQ96EZ4 313 aa9.33□□□□□ -0.92
HOXA1-201ENST00000343060 DOHHQ9BU89 302 aa9.33□□□□□ -0.92
HOXA1-201ENST00000343060 TRIM39Q9HCM9 518 aa9.33□□□□□ -0.92
HOXA1-201ENST00000343060 WDR70Q9NW82 654 aa9.33□□□□□ -0.92
HOXA1-201ENST00000343060 SEC14L4Q9UDX3 406 aa9.33□□□□□ -0.92
HOXA1-201ENST00000343060 GABRQQ9UN88 632 aa9.33□□□□□ -0.92
HOXA1-201ENST00000343060 C12orf71A8MTZ7 269 aa9.33□□□□□ -0.92
HOXA1-201ENST00000343060 FADS2P1A8MWK0 482 aa9.33□□□□□ -0.92
HOXA1-201ENST00000343060 MAGEB17A8MXT2 336 aa9.33□□□□□ -0.92
HOXA1-201ENST00000343060 PDHXO00330 501 aa9.33□□□□□ -0.92
HOXA1-201ENST00000343060 TFECO14948 347 aaPredicted RBP9.33□□□□□ -0.92
HOXA1-201ENST00000343060 MPZL2O60487 215 aa9.33□□□□□ -0.92
HOXA1-201ENST00000343060 CYP7B1O75881 506 aa9.33□□□□□ -0.92
HOXA1-201ENST00000343060 CLDN9O95484 217 aa9.33□□□□□ -0.92
HOXA1-201ENST00000343060 HLA-DQB1P01920 261 aa9.33□□□□□ -0.92
HOXA1-201ENST00000343060 F11P03951 625 aa9.33□□□□□ -0.92
HOXA1-201ENST00000343060 CSF3P09919 207 aa9.33□□□□□ -0.92
HOXA1-201ENST00000343060 COL6A1P12109 1028 aa9.33□□□□□ -0.92
HOXA1-201ENST00000343060 ZNF30P17039 623 aa9.33□□□□□ -0.92
HOXA1-201ENST00000343060 TYMPP19971 482 aa9.33□□□□□ -0.92
HOXA1-201ENST00000343060 CPN2P22792 545 aa9.33□□□□□ -0.92
HOXA1-201ENST00000343060 HOXC8P31273 242 aa9.33□□□□□ -0.92
HOXA1-201ENST00000343060 CRYBB2P43320 205 aa9.33□□□□□ -0.92
HOXA1-201ENST00000343060 IDH2P48735 452 aaKnown RBP9.33□□□□□ -0.92
HOXA1-201ENST00000343060 CYP4F2P78329 520 aa9.33□□□□□ -0.92
HOXA1-201ENST00000343060 TP53BP2Q13625 1128 aa9.33□□□□□ -0.92
HOXA1-201ENST00000343060 CDONQ4KMG0 1287 aa9.33□□□□□ -0.92
HOXA1-201ENST00000343060 CERS6Q6ZMG9 384 aa9.33□□□□□ -0.92
HOXA1-201ENST00000343060 LPCAT1Q8NF37 534 aa9.33□□□□□ -0.92
HOXA1-201ENST00000343060 LKAAEAR1Q8TD35 194 aa9.33□□□□□ -0.92
HOXA1-201ENST00000343060 SNAPC3Q92966 411 aa9.33□□□□□ -0.92
HOXA1-201ENST00000343060 ZC3HAV1LQ96H79 300 aaKnown RBP9.33□□□□□ -0.92
HOXA1-201ENST00000343060 DPH2Q9BQC3 489 aaPredicted RBP9.33□□□□□ -0.92
HOXA1-201ENST00000343060 MAGEH1Q9H213 219 aa9.33□□□□□ -0.92
HOXA1-201ENST00000343060 FZD3Q9NPG1 666 aa9.33□□□□□ -0.92
HOXA1-201ENST00000343060 RLIMQ9NVW2 624 aa9.33□□□□□ -0.92
HOXA1-201ENST00000343060 FAM120CQ9NX05 1096 aaKnown RBP9.33□□□□□ -0.92
HOXA1-201ENST00000343060 SH3BP4Q9P0V3 963 aa9.33□□□□□ -0.92
HOXA1-201ENST00000343060 CPA4Q9UI42 421 aa9.33□□□□□ -0.92
HOXA1-201ENST00000343060 DUSP12Q9UNI6 340 aa9.33□□□□□ -0.92
HOXA1-201ENST00000343060 SUV39H1O43463 412 aa9.32□□□□□ -0.92
HOXA1-201ENST00000343060 CPNE3O75131 537 aaKnown RBP9.32□□□□□ -0.92
HOXA1-201ENST00000343060 ACADMP11310 421 aa9.32□□□□□ -0.92
HOXA1-201ENST00000343060 PRPS1L1P21108 318 aa9.32□□□□□ -0.92
HOXA1-201ENST00000343060 AZGP1P25311 298 aaKnown RBP9.32□□□□□ -0.92
HOXA1-201ENST00000343060 CD83Q01151 205 aa9.32□□□□□ -0.92
HOXA1-201ENST00000343060 SRSF11Q05519 484 aaKnown RBP9.32□□□□□ -0.92
HOXA1-201ENST00000343060 LARS2Q15031 903 aaKnown RBP9.32□□□□□ -0.92
HOXA1-201ENST00000343060 MED22Q15528 200 aa9.32□□□□□ -0.92
HOXA1-201ENST00000343060 UGT8Q16880 541 aa9.32□□□□□ -0.92
HOXA1-201ENST00000343060 MICAQ29983 383 aa9.32□□□□□ -0.92
HOXA1-201ENST00000343060 ESCO2Q56NI9 601 aa9.32□□□□□ -0.92
HOXA1-201ENST00000343060 CDKL4Q5MAI5 379 aa9.32□□□□□ -0.92
HOXA1-201ENST00000343060 NADSYN1Q6IA69 706 aa9.32□□□□□ -0.92
HOXA1-201ENST00000343060 DDX53Q86TM3 631 aaKnown RBP9.32□□□□□ -0.92
HOXA1-201ENST00000343060 THEM5Q8N1Q8 247 aa9.32□□□□□ -0.92
HOXA1-201ENST00000343060 YIPF7Q8N8F6 280 aa9.32□□□□□ -0.92
HOXA1-201ENST00000343060 OR8J2Q8NGG1 315 aa9.32□□□□□ -0.92
HOXA1-201ENST00000343060 GTF3C2Q8WUA4 911 aaPredicted RBP9.32□□□□□ -0.92
HOXA1-201ENST00000343060 LPPQ93052 612 aa9.32□□□□□ -0.92
HOXA1-201ENST00000343060 EGFL8Q99944 293 aa9.32□□□□□ -0.92
HOXA1-201ENST00000343060 NIPSNAP1Q9BPW8 284 aa9.32□□□□□ -0.92
HOXA1-201ENST00000343060 CINPQ9BW66 212 aaPredicted RBP9.32□□□□□ -0.92
HOXA1-201ENST00000343060 GTPBP2Q9BX10 602 aaKnown RBP9.32□□□□□ -0.92
HOXA1-201ENST00000343060 MIXL1Q9H2W2 232 aa9.32□□□□□ -0.92
HOXA1-201ENST00000343060 FBXO44Q9H4M3 255 aa9.32□□□□□ -0.92
HOXA1-201ENST00000343060 C12orf10Q9HB07 376 aa9.32□□□□□ -0.92
HOXA1-201ENST00000343060 IMPAD1Q9NX62 359 aa9.32□□□□□ -0.92
HOXA1-201ENST00000343060 TOR4AQ9NXH8 423 aa9.32□□□□□ -0.92
HOXA1-201ENST00000343060 FTSJ1Q9UET6 329 aa9.32□□□□□ -0.92
HOXA1-201ENST00000343060 MAPRE3Q9UPY8 281 aa9.32□□□□□ -0.92
HOXA1-201ENST00000343060 ACTL7AQ9Y615 435 aa9.32□□□□□ -0.92
HOXA1-201ENST00000343060 ZNF106Q9H2Y7 1883 aaKnown RBP9.32□□□□□ -0.92
HOXA1-201ENST00000343060 HYKKA2RU49 373 aa9.32□□□□□ -0.92
HOXA1-201ENST00000343060 SCAMP3O14828 347 aaKnown RBP9.32□□□□□ -0.92
HOXA1-201ENST00000343060 RGS5O15539 181 aa9.32□□□□□ -0.92
HOXA1-201ENST00000343060 CCNB2O95067 398 aa9.32□□□□□ -0.92
HOXA1-201ENST00000343060 AMD1P17707 334 aa9.32□□□□□ -0.92
HOXA1-201ENST00000343060 DGKAP23743 735 aa9.32□□□□□ -0.92
HOXA1-201ENST00000343060 IL12RB1P42701 662 aa9.32□□□□□ -0.92
HOXA1-201ENST00000343060 KIR2DL3P43628 341 aa9.32□□□□□ -0.92
HOXA1-201ENST00000343060 LIMS1P48059 325 aa9.32□□□□□ -0.92
HOXA1-201ENST00000343060 PSEN2P49810 448 aa9.32□□□□□ -0.92
HOXA1-201ENST00000343060 EFEMP1Q12805 493 aa9.32□□□□□ -0.92
HOXA1-201ENST00000343060 IKZF1Q13422 519 aa9.32□□□□□ -0.92
HOXA1-201ENST00000343060 TAB1Q15750 504 aa9.32□□□□□ -0.92
HOXA1-201ENST00000343060 RNLSQ5VYX0 342 aa9.32□□□□□ -0.92
HOXA1-201ENST00000343060 SAXO2Q658L1 398 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms