RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 OR14C36Q8NHC7 312 aa17.16■□□□□ 0.34
SMAD4-201ENST00000342988 ABHD16BQ9H3Z7 469 aa17.16■□□□□ 0.34
SMAD4-201ENST00000342988 APOC3P02656 99 aa17.16■□□□□ 0.34
SMAD4-201ENST00000342988 ADGRE1Q14246 886 aa17.16■□□□□ 0.34
SMAD4-201ENST00000342988 MARCH9Q86YJ5 346 aa17.16■□□□□ 0.34
SMAD4-201ENST00000342988 CNTNAP3BQ96NU0 1288 aa17.16■□□□□ 0.34
SMAD4-201ENST00000342988 TLR4O00206 839 aa17.16■□□□□ 0.34
SMAD4-201ENST00000342988 SCAMP3O14828 347 aaKnown RBP17.16■□□□□ 0.34
SMAD4-201ENST00000342988 CAPSQ13938 189 aa17.16■□□□□ 0.34
SMAD4-201ENST00000342988 CDC42EP5Q6NZY7 148 aa17.16■□□□□ 0.34
SMAD4-201ENST00000342988 SLC36A4Q6YBV0 504 aa17.16■□□□□ 0.34
SMAD4-201ENST00000342988 ZNF514Q96K75 400 aaPredicted RBP17.16■□□□□ 0.34
SMAD4-201ENST00000342988 TMEM109Q9BVC6 243 aa17.16■□□□□ 0.34
SMAD4-201ENST00000342988 METTL7AQ9H8H3 244 aa17.16■□□□□ 0.34
SMAD4-201ENST00000342988 POLE4Q9NR33 117 aa17.16■□□□□ 0.34
SMAD4-201ENST00000342988 F8W036 122 aa17.16■□□□□ 0.34
SMAD4-201ENST00000342988 INSRRP14616 1297 aa17.16■□□□□ 0.34
SMAD4-201ENST00000342988 BLOC1S1P78537 153 aa17.16■□□□□ 0.34
SMAD4-201ENST00000342988 RNF220Q5VTB9 566 aa17.16■□□□□ 0.34
SMAD4-201ENST00000342988 PSRC1Q6PGN9 363 aaPredicted RBP17.16■□□□□ 0.34
SMAD4-201ENST00000342988 FAM183BPQ6ZVS7 135 aa17.16■□□□□ 0.34
SMAD4-201ENST00000342988 TMEM156Q8N614 296 aa17.16■□□□□ 0.34
SMAD4-201ENST00000342988 CASD1Q96PB1 797 aa17.16■□□□□ 0.34
SMAD4-201ENST00000342988 ARID1AO14497 2285 aa17.15■□□□□ 0.34
SMAD4-201ENST00000342988 NACAE9PAV3 2078 aa17.15■□□□□ 0.34
SMAD4-201ENST00000342988 OXTRP30559 389 aa17.15■□□□□ 0.34
SMAD4-201ENST00000342988 RFX5P48382 616 aaPredicted RBP17.15■□□□□ 0.34
SMAD4-201ENST00000342988 AKR1C2P52895 323 aa17.15■□□□□ 0.34
SMAD4-201ENST00000342988 ACTBP60709 375 aa17.15■□□□□ 0.34
SMAD4-201ENST00000342988 ACTG1P63261 375 aa17.15■□□□□ 0.34
SMAD4-201ENST00000342988 CHTF18Q8WVB6 975 aa17.15■□□□□ 0.34
SMAD4-201ENST00000342988 PLCXD1Q9NUJ7 323 aa17.15■□□□□ 0.34
SMAD4-201ENST00000342988 IL20RAQ9UHF4 553 aa17.15■□□□□ 0.34
SMAD4-201ENST00000342988 NDUFS1P28331 727 aa17.15■□□□□ 0.34
SMAD4-201ENST00000342988 GALNT10Q86SR1 603 aa17.15■□□□□ 0.34
SMAD4-201ENST00000342988 SLC35F5Q8WV83 523 aa17.15■□□□□ 0.34
SMAD4-201ENST00000342988 ZNF419Q96HQ0 510 aaPredicted RBP17.15■□□□□ 0.34
SMAD4-201ENST00000342988 RNF157Q96PX1 679 aa17.15■□□□□ 0.34
SMAD4-201ENST00000342988 TAAR1Q96RJ0 339 aa17.15■□□□□ 0.34
SMAD4-201ENST00000342988 ZNF559Q9BR84 538 aa17.15■□□□□ 0.34
SMAD4-201ENST00000342988 MECRQ9BV79 373 aa17.15■□□□□ 0.34
SMAD4-201ENST00000342988 SRA1Q9HD15 236 aaKnown RBP17.15■□□□□ 0.34
SMAD4-201ENST00000342988 PCDHB14Q9Y5E9 798 aa17.15■□□□□ 0.34
SMAD4-201ENST00000342988 A0A0U1RQK1 487 aa17.15■□□□□ 0.34
SMAD4-201ENST00000342988 NSG1P42857 185 aa17.15■□□□□ 0.34
SMAD4-201ENST00000342988 C3orf67Q6ZVT6 689 aa17.15■□□□□ 0.34
SMAD4-201ENST00000342988 SPIN2AQ99865 258 aa17.15■□□□□ 0.34
SMAD4-201ENST00000342988 SPIN2BQ9BPZ2 258 aa17.15■□□□□ 0.34
SMAD4-201ENST00000342988 HPSEQ9Y251 543 aa17.15■□□□□ 0.34
SMAD4-201ENST00000342988 SCO1O75880 301 aa17.15■□□□□ 0.34
SMAD4-201ENST00000342988 FRKP42685 505 aaPredicted RBP17.15■□□□□ 0.34
SMAD4-201ENST00000342988 ZBED5Q49AG3 693 aa17.15■□□□□ 0.34
SMAD4-201ENST00000342988 ZCCHC10Q8TBK6 192 aa17.15■□□□□ 0.34
SMAD4-201ENST00000342988 CNOT9Q92600 299 aaKnown RBP17.15■□□□□ 0.34
SMAD4-201ENST00000342988 SAMD11Q96NU1 681 aa17.15■□□□□ 0.34
SMAD4-201ENST00000342988 SLC35A5Q9BS91 424 aa17.15■□□□□ 0.34
SMAD4-201ENST00000342988 LRRC19Q9H756 370 aa17.15■□□□□ 0.34
SMAD4-201ENST00000342988 DHDHQ9UQ10 334 aa17.15■□□□□ 0.34
SMAD4-201ENST00000342988 GLI2P10070 1586 aa17.15■□□□□ 0.34
SMAD4-201ENST00000342988 BPGMP07738 259 aa17.15■□□□□ 0.34
SMAD4-201ENST00000342988 ACTC1P68032 377 aa17.15■□□□□ 0.34
SMAD4-201ENST00000342988 ACTA1P68133 377 aa17.15■□□□□ 0.34
SMAD4-201ENST00000342988 NFIXQ14938 502 aa17.15■□□□□ 0.34
SMAD4-201ENST00000342988 ZC3H14Q6PJT7 736 aaKnown RBP17.15■□□□□ 0.34
SMAD4-201ENST00000342988 TCEANCQ8N8B7 351 aa17.15■□□□□ 0.34
SMAD4-201ENST00000342988 BEST4Q8NFU0 473 aa17.15■□□□□ 0.34
SMAD4-201ENST00000342988 EFCAB11Q9BUY7 163 aa17.15■□□□□ 0.34
SMAD4-201ENST00000342988 EBPLQ9BY08 206 aa17.15■□□□□ 0.34
SMAD4-201ENST00000342988 ULBP1Q9BZM6 244 aa17.15■□□□□ 0.34
SMAD4-201ENST00000342988 PCDHB3Q9Y5E6 796 aa17.15■□□□□ 0.34
SMAD4-201ENST00000342988 PRR5-ARHGAP8B1AHC4 643 aa17.15■□□□□ 0.34
SMAD4-201ENST00000342988 MEN1O00255 615 aa17.15■□□□□ 0.34
SMAD4-201ENST00000342988 TOR1BO14657 336 aa17.15■□□□□ 0.34
SMAD4-201ENST00000342988 DLDP09622 509 aaKnown RBP17.15■□□□□ 0.34
SMAD4-201ENST00000342988 HNRNPKP61978 463 aaKnown RBP eCLIP17.15■□□□□ 0.344e-8■■■■■ 26.9
SMAD4-201ENST00000342988 ARHGAP8P85298 464 aa17.15■□□□□ 0.34
SMAD4-201ENST00000342988 GAD2Q05329 585 aa17.15■□□□□ 0.34
SMAD4-201ENST00000342988 ANKRD46Q86W74 232 aa17.15■□□□□ 0.34
SMAD4-201ENST00000342988 FIBCD1Q8N539 461 aa17.15■□□□□ 0.34
SMAD4-201ENST00000342988 TAAR8Q969N4 342 aa17.15■□□□□ 0.34
SMAD4-201ENST00000342988 GCM1Q9NP62 436 aa17.15■□□□□ 0.34
SMAD4-201ENST00000342988 B4GALT7Q9UBV7 327 aa17.15■□□□□ 0.34
SMAD4-201ENST00000342988 DOCK10Q96BY6 2186 aa17.15■□□□□ 0.34
SMAD4-201ENST00000342988 RPL26P61254 145 aaKnown RBP17.15■□□□□ 0.34
SMAD4-201ENST00000342988 LRFN5Q96NI6 719 aa17.15■□□□□ 0.34
SMAD4-201ENST00000342988 MOB1AQ9H8S9 216 aa17.15■□□□□ 0.34
SMAD4-201ENST00000342988 TRPM6Q9BX84 2022 aa17.14■□□□□ 0.34
SMAD4-201ENST00000342988 POU4F2Q12837 409 aa17.14■□□□□ 0.33
SMAD4-201ENST00000342988 SLC22A10Q63ZE4 541 aa17.14■□□□□ 0.33
SMAD4-201ENST00000342988 PLEKHG7Q6ZR37 379 aa17.14■□□□□ 0.33
SMAD4-201ENST00000342988 BBS12Q6ZW61 710 aa17.14■□□□□ 0.33
SMAD4-201ENST00000342988 GTF2H5Q6ZYL4 71 aa17.14■□□□□ 0.33
SMAD4-201ENST00000342988 ATG4CQ96DT6 458 aa17.14■□□□□ 0.33
SMAD4-201ENST00000342988 HMX1Q9NP08 348 aaPredicted RBP17.14■□□□□ 0.33
SMAD4-201ENST00000342988 KIF25Q9UIL4 384 aa17.14■□□□□ 0.33
SMAD4-201ENST00000342988 E9PI62 339 aa17.14■□□□□ 0.33
SMAD4-201ENST00000342988 CDH1P12830 882 aa17.14■□□□□ 0.33
SMAD4-201ENST00000342988 PAPD4Q6PIY7 484 aaKnown RBP17.14■□□□□ 0.33
SMAD4-201ENST00000342988 NIPA1Q7RTP0 329 aa17.14■□□□□ 0.33
SMAD4-201ENST00000342988 KCNC2Q96PR1 638 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms