RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 PRDX6P30041 224 aa12.49□□□□□ -0.41
USP47-202ENST00000339865 AGTR1P30556 359 aa12.49□□□□□ -0.41
USP47-202ENST00000339865 ZNF705AQ6ZN79 300 aaPredicted RBP12.49□□□□□ -0.41
USP47-202ENST00000339865 SLC9A9Q8IVB4 645 aa12.49□□□□□ -0.41
USP47-202ENST00000339865 TMEM185AQ8NFB2 350 aa12.49□□□□□ -0.41
USP47-202ENST00000339865 CHPT1Q8WUD6 406 aa12.49□□□□□ -0.41
USP47-202ENST00000339865 PTERQ96BW5 349 aa12.49□□□□□ -0.41
USP47-202ENST00000339865 PDCD1LG2Q9BQ51 273 aa12.49□□□□□ -0.41
USP47-202ENST00000339865 CCDC106Q9BWC9 280 aa12.49□□□□□ -0.41
USP47-202ENST00000339865 P2RX2Q9UBL9 471 aa12.49□□□□□ -0.41
USP47-202ENST00000339865 OR4F21O95013 312 aa12.49□□□□□ -0.41
USP47-202ENST00000339865 CXCL14O95715 111 aa12.49□□□□□ -0.41
USP47-202ENST00000339865 CDKN1CP49918 316 aaPredicted RBP12.49□□□□□ -0.41
USP47-202ENST00000339865 NEIL3Q8TAT5 605 aa12.49□□□□□ -0.41
USP47-202ENST00000339865 ZDHHC1Q8WTX9 485 aa12.49□□□□□ -0.41
USP47-202ENST00000339865 CADM1Q9BY67 442 aaKnown RBP12.49□□□□□ -0.41
USP47-202ENST00000339865 BCAS3Q9H6U6 928 aa12.49□□□□□ -0.41
USP47-202ENST00000339865 DNAJC27Q9NZQ0 273 aa12.49□□□□□ -0.41
USP47-202ENST00000339865 CYP1A2P05177 515 aa12.48□□□□□ -0.41
USP47-202ENST00000339865 RETP07949 1114 aa12.48□□□□□ -0.41
USP47-202ENST00000339865 JUNDP17535 347 aa12.48□□□□□ -0.41
USP47-202ENST00000339865 KELP23276 732 aa12.48□□□□□ -0.41
USP47-202ENST00000339865 NLRP8Q86W28 1048 aa12.48□□□□□ -0.41
USP47-202ENST00000339865 OR5AK3PQ8NH89 298 aa12.48□□□□□ -0.41
USP47-202ENST00000339865 FAM151AQ8WW52 585 aa12.48□□□□□ -0.41
USP47-202ENST00000339865 TMEM80Q96HE8 168 aa12.48□□□□□ -0.41
USP47-202ENST00000339865 DEFB118Q96PH6 123 aa12.48□□□□□ -0.41
USP47-202ENST00000339865 PCDHGA2Q9Y5H1 932 aa12.48□□□□□ -0.41
USP47-202ENST00000339865 SCGB2A1O75556 95 aa12.48□□□□□ -0.41
USP47-202ENST00000339865 JMJD7P0C870 316 aa12.48□□□□□ -0.41
USP47-202ENST00000339865 CDK3Q00526 305 aa12.48□□□□□ -0.41
USP47-202ENST00000339865 SLC2A7Q6PXP3 512 aa12.48□□□□□ -0.41
USP47-202ENST00000339865 UBQLNLQ8IYU4 475 aa12.48□□□□□ -0.41
USP47-202ENST00000339865 ZFP82Q8N141 532 aa12.48□□□□□ -0.41
USP47-202ENST00000339865 HAS2Q92819 552 aa12.48□□□□□ -0.41
USP47-202ENST00000339865 CCDC74AQ96AQ1 378 aa12.48□□□□□ -0.41
USP47-202ENST00000339865 TWNKQ96RR1 684 aa12.48□□□□□ -0.41
USP47-202ENST00000339865 ADAM2Q99965 735 aa12.48□□□□□ -0.41
USP47-202ENST00000339865 ADAP2Q9NPF8 381 aa12.48□□□□□ -0.41
USP47-202ENST00000339865 FANCFQ9NPI8 374 aa12.48□□□□□ -0.41
USP47-202ENST00000339865 A0A1B0GVI7 797 aa12.48□□□□□ -0.41
USP47-202ENST00000339865 E9PI62 339 aa12.48□□□□□ -0.41
USP47-202ENST00000339865 ACTL6BO94805 426 aa12.48□□□□□ -0.41
USP47-202ENST00000339865 CRISP3P54108 245 aa12.48□□□□□ -0.41
USP47-202ENST00000339865 TAS2R50P59544 299 aa12.48□□□□□ -0.41
USP47-202ENST00000339865 RRAS2P62070 204 aaPredicted RBP12.48□□□□□ -0.41
USP47-202ENST00000339865 LCP2Q13094 533 aa12.48□□□□□ -0.41
USP47-202ENST00000339865 TMEM236Q5W0B7 351 aa12.48□□□□□ -0.41
USP47-202ENST00000339865 GSG1LQ6UXU4 331 aa12.48□□□□□ -0.41
USP47-202ENST00000339865 C12orf40Q86WS4 652 aa12.48□□□□□ -0.41
USP47-202ENST00000339865 OSTF1Q92882 214 aa12.48□□□□□ -0.41
USP47-202ENST00000339865 LRRC58Q96CX6 371 aa12.48□□□□□ -0.41
USP47-202ENST00000339865 MS4A12Q9NXJ0 267 aa12.48□□□□□ -0.41
USP47-202ENST00000339865 A8MXE2 369 aa12.48□□□□□ -0.41
USP47-202ENST00000339865 ANXA8P13928 327 aa12.48□□□□□ -0.41
USP47-202ENST00000339865 HABP2Q14520 560 aaPredicted RBP12.48□□□□□ -0.41
USP47-202ENST00000339865 BBS12Q6ZW61 710 aa12.48□□□□□ -0.41
USP47-202ENST00000339865 ARL11Q969Q4 196 aa12.48□□□□□ -0.41
USP47-202ENST00000339865 CAMK1GQ96NX5 476 aa12.48□□□□□ -0.41
USP47-202ENST00000339865 H1F0P07305 194 aaKnown RBP12.48□□□□□ -0.41
USP47-202ENST00000339865 ZNF182P17025 639 aaPredicted RBP12.48□□□□□ -0.41
USP47-202ENST00000339865 BDKRB2P30411 391 aa12.48□□□□□ -0.41
USP47-202ENST00000339865 ETV5P41161 510 aa12.48□□□□□ -0.41
USP47-202ENST00000339865 RAB30Q15771 203 aa12.48□□□□□ -0.41
USP47-202ENST00000339865 MOGQ16653 247 aa12.48□□□□□ -0.41
USP47-202ENST00000339865 UGCGQ16739 394 aa12.48□□□□□ -0.41
USP47-202ENST00000339865 SLC35F1Q5T1Q4 408 aa12.48□□□□□ -0.41
USP47-202ENST00000339865 FAM198BQ6UWH4 519 aa12.48□□□□□ -0.41
USP47-202ENST00000339865 ELP5Q8TE02 316 aa12.48□□□□□ -0.41
USP47-202ENST00000339865 FAIMQ9NVQ4 179 aa12.48□□□□□ -0.41
USP47-202ENST00000339865 H0YGN5 161 aa12.48□□□□□ -0.41
USP47-202ENST00000339865 CCL16O15467 120 aa12.48□□□□□ -0.41
USP47-202ENST00000339865 FLRT2O43155 660 aa12.48□□□□□ -0.41
USP47-202ENST00000339865 ENTPD3O75355 529 aa12.48□□□□□ -0.41
USP47-202ENST00000339865 DIRAS1O95057 198 aa12.48□□□□□ -0.41
USP47-202ENST00000339865 C1RP00736 705 aa12.48□□□□□ -0.41
USP47-202ENST00000339865 HLA-DPB1P04440 258 aa12.48□□□□□ -0.41
USP47-202ENST00000339865 CDK1P06493 297 aa12.48□□□□□ -0.41
USP47-202ENST00000339865 DLDP09622 509 aaKnown RBP12.48□□□□□ -0.41
USP47-202ENST00000339865 HNF1BP35680 557 aa12.48□□□□□ -0.41
USP47-202ENST00000339865 GALNT13Q8IUC8 556 aa12.48□□□□□ -0.41
USP47-202ENST00000339865 MAB21L3Q8N8X9 362 aa12.48□□□□□ -0.41
USP47-202ENST00000339865 OR52E4Q8NGH9 312 aa12.48□□□□□ -0.41
USP47-202ENST00000339865 JPH3Q8WXH2 748 aaPredicted RBP12.48□□□□□ -0.41
USP47-202ENST00000339865 OR4K3Q96R72 315 aa12.48□□□□□ -0.41
USP47-202ENST00000339865 PZPP20742 1482 aa12.48□□□□□ -0.41
USP47-202ENST00000339865 BHLHE40O14503 412 aa12.47□□□□□ -0.41
USP47-202ENST00000339865 RNASEH2AO75792 299 aaKnown RBP12.47□□□□□ -0.41
USP47-202ENST00000339865 LILRB2Q8N423 598 aa12.47□□□□□ -0.41
USP47-202ENST00000339865 SHC3Q92529 594 aa12.47□□□□□ -0.41
USP47-202ENST00000339865 PEX12O00623 359 aa12.47□□□□□ -0.41
USP47-202ENST00000339865 PAGE1O75459 146 aa12.47□□□□□ -0.41
USP47-202ENST00000339865 STBD1O95210 358 aa12.47□□□□□ -0.41
USP47-202ENST00000339865 SOX2P48431 317 aa12.47□□□□□ -0.41
USP47-202ENST00000339865 FGFBP1Q14512 234 aa12.47□□□□□ -0.41
USP47-202ENST00000339865 TARBP2Q15633 366 aaKnown RBP12.47□□□□□ -0.41
USP47-202ENST00000339865 LIPKQ5VXJ0 399 aa12.47□□□□□ -0.41
USP47-202ENST00000339865 ANKRD54Q6NXT1 300 aa12.47□□□□□ -0.41
USP47-202ENST00000339865 TMEM151AQ8N4L1 468 aa12.47□□□□□ -0.41
USP47-202ENST00000339865 OR14C36Q8NHC7 312 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms