RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 TCRBV5S2A0A599 114 aa21.51■■□□□ 1.03
PDLIM2-203ENST00000339162 RTCAO00442 366 aaKnown RBP21.51■■□□□ 1.03
PDLIM2-203ENST00000339162 PRMT3O60678 531 aa21.51■■□□□ 1.03
PDLIM2-203ENST00000339162 APBB3O95704 486 aa21.51■■□□□ 1.03
PDLIM2-203ENST00000339162 PSMA4P25789 261 aaKnown RBP21.51■■□□□ 1.03
PDLIM2-203ENST00000339162 ALG11Q2TAA5 492 aa21.51■■□□□ 1.03
PDLIM2-203ENST00000339162 GALNT18Q6P9A2 607 aa21.51■■□□□ 1.03
PDLIM2-203ENST00000339162 ADGRG5Q8IZF4 528 aa21.51■■□□□ 1.03
PDLIM2-203ENST00000339162 TMEM132CQ8N3T6 1108 aa21.51■■□□□ 1.03
PDLIM2-203ENST00000339162 TMEM145Q8NBT3 493 aa21.51■■□□□ 1.03
PDLIM2-203ENST00000339162 BIRC7Q96CA5 298 aa21.51■■□□□ 1.03
PDLIM2-203ENST00000339162 DUSP26Q9BV47 211 aa21.51■■□□□ 1.03
PDLIM2-203ENST00000339162 MVB12BQ9H7P6 319 aa21.51■■□□□ 1.03
PDLIM2-203ENST00000339162 PELI2Q9HAT8 420 aa21.51■■□□□ 1.03
PDLIM2-203ENST00000339162 SPHK1Q9NYA1 384 aa21.51■■□□□ 1.03
PDLIM2-203ENST00000339162 MAN2B1O00754 1011 aa21.51■■□□□ 1.03
PDLIM2-203ENST00000339162 OR1F1O43749 312 aa21.51■■□□□ 1.03
PDLIM2-203ENST00000339162 LCMT2O60294 686 aaKnown RBP21.51■■□□□ 1.03
PDLIM2-203ENST00000339162 KLHL18O94889 574 aa21.51■■□□□ 1.03
PDLIM2-203ENST00000339162 HOXB9P17482 250 aaPredicted RBP21.51■■□□□ 1.03
PDLIM2-203ENST00000339162 ASMTP46597 345 aa21.51■■□□□ 1.03
PDLIM2-203ENST00000339162 SRP54P61011 504 aaKnown RBP21.51■■□□□ 1.03
PDLIM2-203ENST00000339162 DPY19L1Q2PZI1 675 aa21.51■■□□□ 1.03
PDLIM2-203ENST00000339162 MTX3Q5HYI7 312 aa21.51■■□□□ 1.03
PDLIM2-203ENST00000339162 C10orf62Q5T681 223 aaPredicted RBP21.51■■□□□ 1.03
PDLIM2-203ENST00000339162 CPTPQ5TA50 214 aa21.51■■□□□ 1.03
PDLIM2-203ENST00000339162 OR8J2Q8NGG1 315 aa21.51■■□□□ 1.03
PDLIM2-203ENST00000339162 FIG4Q92562 907 aa21.51■■□□□ 1.03
PDLIM2-203ENST00000339162 NELL1Q92832 810 aa21.51■■□□□ 1.03
PDLIM2-203ENST00000339162 F2RL3Q96RI0 385 aa21.51■■□□□ 1.03
PDLIM2-203ENST00000339162 KAT8Q9H7Z6 458 aaKnown RBP21.51■■□□□ 1.03
PDLIM2-203ENST00000339162 SLCO1B1Q9Y6L6 691 aa21.51■■□□□ 1.03
PDLIM2-203ENST00000339162 KNL1Q8NG31 2342 aa21.5■■□□□ 1.03
PDLIM2-203ENST00000339162 FAM149AA5PLN7 773 aa21.5■■□□□ 1.03
PDLIM2-203ENST00000339162 STATHP02808 62 aa21.5■■□□□ 1.03
PDLIM2-203ENST00000339162 MT-ND1P03886 318 aa21.5■■□□□ 1.03
PDLIM2-203ENST00000339162 PTX3P26022 381 aaPredicted RBP21.5■■□□□ 1.03
PDLIM2-203ENST00000339162 PHEXP78562 749 aa21.5■■□□□ 1.03
PDLIM2-203ENST00000339162 PRDX1Q06830 199 aaKnown RBP21.5■■□□□ 1.03
PDLIM2-203ENST00000339162 ZNF763Q0D2J5 394 aa21.5■■□□□ 1.03
PDLIM2-203ENST00000339162 FXNQ16595 210 aa21.5■■□□□ 1.03
PDLIM2-203ENST00000339162 ZNF542PQ5EBM4 170 aa21.5■■□□□ 1.03
PDLIM2-203ENST00000339162 ZNF621Q6ZSS3 439 aa21.5■■□□□ 1.03
PDLIM2-203ENST00000339162 SLC22A18ASQ8N1D0 253 aa21.5■■□□□ 1.03
PDLIM2-203ENST00000339162 METTL4Q8N3J2 472 aa21.5■■□□□ 1.03
PDLIM2-203ENST00000339162 GALNT4Q8N4A0 578 aa21.5■■□□□ 1.03
PDLIM2-203ENST00000339162 OR2L8Q8NGY9 312 aa21.5■■□□□ 1.03
PDLIM2-203ENST00000339162 SNX19Q92543 992 aa21.5■■□□□ 1.03
PDLIM2-203ENST00000339162 SEPHS2Q99611 448 aa21.5■■□□□ 1.03
PDLIM2-203ENST00000339162 CDX2Q99626 313 aaPredicted RBP21.5■■□□□ 1.03
PDLIM2-203ENST00000339162 CPPED1Q9BRF8 314 aaPredicted RBP21.5■■□□□ 1.03
PDLIM2-203ENST00000339162 EFHD1Q9BUP0 239 aa21.5■■□□□ 1.03
PDLIM2-203ENST00000339162 MUC13Q9H3R2 512 aa21.5■■□□□ 1.03
PDLIM2-203ENST00000339162 ZNF624Q9P2J8 865 aaPredicted RBP21.5■■□□□ 1.03
PDLIM2-203ENST00000339162 LRCH1Q9Y2L9 728 aa21.5■■□□□ 1.03
PDLIM2-203ENST00000339162 PXNP49023 591 aaPredicted RBP21.49■■□□□ 1.03
PDLIM2-203ENST00000339162 CSNK1G2P78368 415 aa21.49■■□□□ 1.03
PDLIM2-203ENST00000339162 UBXN2BQ14CS0 331 aa21.49■■□□□ 1.03
PDLIM2-203ENST00000339162 DUOXA1Q1HG43 343 aa21.49■■□□□ 1.03
PDLIM2-203ENST00000339162 AASDHQ4L235 1098 aaPredicted RBP21.49■■□□□ 1.03
PDLIM2-203ENST00000339162 SYT13Q7L8C5 426 aa21.49■■□□□ 1.03
PDLIM2-203ENST00000339162 ZNF548Q8NEK5 533 aaPredicted RBP21.49■■□□□ 1.03
PDLIM2-203ENST00000339162 OR4E2Q8NGC2 313 aa21.49■■□□□ 1.03
PDLIM2-203ENST00000339162 ARMC1Q9NVT9 282 aa21.49■■□□□ 1.03
PDLIM2-203ENST00000339162 KLHL20Q9Y2M5 609 aa21.49■■□□□ 1.03
PDLIM2-203ENST00000339162 HOXB3P14651 431 aaPredicted RBP21.49■■□□□ 1.03
PDLIM2-203ENST00000339162 TAS2R50P59544 299 aa21.49■■□□□ 1.03
PDLIM2-203ENST00000339162 REEP5Q00765 189 aa21.49■■□□□ 1.03
PDLIM2-203ENST00000339162 ZNF385BQ569K4 471 aa21.49■■□□□ 1.03
PDLIM2-203ENST00000339162 PROSER1Q86XN7 944 aa21.49■■□□□ 1.03
PDLIM2-203ENST00000339162 MMP21Q8N119 569 aa21.49■■□□□ 1.03
PDLIM2-203ENST00000339162 ZNF687Q8N1G0 1237 aa21.49■■□□□ 1.03
PDLIM2-203ENST00000339162 CLEC4FQ8N1N0 589 aa21.49■■□□□ 1.03
PDLIM2-203ENST00000339162 OR4K1Q8NGD4 311 aa21.49■■□□□ 1.03
PDLIM2-203ENST00000339162 NSMCE2Q96MF7 247 aa21.49■■□□□ 1.03
PDLIM2-203ENST00000339162 SH3GL1Q99961 368 aa21.49■■□□□ 1.03
PDLIM2-203ENST00000339162 TCEAL2Q9H3H9 227 aaPredicted RBP21.49■■□□□ 1.03
PDLIM2-203ENST00000339162 CXorf56Q9H5V9 222 aa21.49■■□□□ 1.03
PDLIM2-203ENST00000339162 MAGEL2Q9UJ55 1249 aa21.49■■□□□ 1.03
PDLIM2-203ENST00000339162 PCDHB11Q9Y5F2 797 aa21.49■■□□□ 1.03
PDLIM2-203ENST00000339162 VCANP13611 3396 aa21.48■■□□□ 1.03
PDLIM2-203ENST00000339162 PLPP1O14494 284 aa21.48■■□□□ 1.03
PDLIM2-203ENST00000339162 PEX1O43933 1283 aa21.48■■□□□ 1.03
PDLIM2-203ENST00000339162 SERPIND1P05546 499 aa21.48■■□□□ 1.03
PDLIM2-203ENST00000339162 GGT1P19440 569 aa21.48■■□□□ 1.03
PDLIM2-203ENST00000339162 CXCR2P25025 360 aa21.48■■□□□ 1.03
PDLIM2-203ENST00000339162 PEBP1P30086 187 aaKnown RBP21.48■■□□□ 1.03
PDLIM2-203ENST00000339162 HPCAL1P37235 193 aa21.48■■□□□ 1.03
PDLIM2-203ENST00000339162 CMPK2Q5EBM0 449 aa21.48■■□□□ 1.03
PDLIM2-203ENST00000339162 ABRAXAS1Q6UWZ7 409 aa21.48■■□□□ 1.03
PDLIM2-203ENST00000339162 ZNF551Q7Z340 670 aaPredicted RBP21.48■■□□□ 1.03
PDLIM2-203ENST00000339162 SLC9B2Q86UD5 537 aa21.48■■□□□ 1.03
PDLIM2-203ENST00000339162 FBXL6Q8N531 539 aa21.48■■□□□ 1.03
PDLIM2-203ENST00000339162 ICA1LQ8NDH6 482 aa21.48■■□□□ 1.03
PDLIM2-203ENST00000339162 TSTD1Q8NFU3 115 aa21.48■■□□□ 1.03
PDLIM2-203ENST00000339162 PUM2Q8TB72 1066 aaKnown RBP eCLIP21.48■■□□□ 1.03
PDLIM2-203ENST00000339162 PNPT1Q8TCS8 783 aaKnown RBP21.48■■□□□ 1.03
PDLIM2-203ENST00000339162 C16orf78Q8WTQ4 265 aa21.48■■□□□ 1.03
PDLIM2-203ENST00000339162 EME1Q96AY2 570 aa21.48■■□□□ 1.03
PDLIM2-203ENST00000339162 FOXQ1Q9C009 403 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms