RNA–Protein interactions for RNA: ENST00000336596.6

EPHA3-201, Transcript of EPH receptor A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHA3, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-201ENST00000336596 TMEM17Q86X19 198 aa7.12□□□□□ -1.27
EPHA3-201ENST00000336596 SLC15A3Q8IY34 581 aa7.12□□□□□ -1.27
EPHA3-201ENST00000336596 LRRC34Q8IZ02 419 aa7.12□□□□□ -1.27
EPHA3-201ENST00000336596 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.12□□□□□ -1.27
EPHA3-201ENST00000336596 ZFPM2Q8WW38 1151 aa7.12□□□□□ -1.27
EPHA3-201ENST00000336596 NPY6RQ99463 290 aa7.12□□□□□ -1.27
EPHA3-201ENST00000336596 TIMM29Q9BSF4 260 aa7.12□□□□□ -1.27
EPHA3-201ENST00000336596 FEM1AQ9BSK4 669 aa7.12□□□□□ -1.27
EPHA3-201ENST00000336596 FBXO9Q9UK97 447 aaPredicted RBP7.12□□□□□ -1.27
EPHA3-201ENST00000336596 UTS2RQ9UKP6 389 aa7.12□□□□□ -1.27
EPHA3-201ENST00000336596 KCNK6Q9Y257 313 aa7.12□□□□□ -1.27
EPHA3-201ENST00000336596 C1orf226A1L170 272 aa7.12□□□□□ -1.27
EPHA3-201ENST00000336596 C2orf71A6NGG8 1288 aa7.12□□□□□ -1.27
EPHA3-201ENST00000336596 KHDRBS3O75525 346 aaKnown RBP7.12□□□□□ -1.27
EPHA3-201ENST00000336596 ITGB1P05556 798 aa7.12□□□□□ -1.27
EPHA3-201ENST00000336596 TCN2P20062 427 aa7.12□□□□□ -1.27
EPHA3-201ENST00000336596 CCR10P46092 362 aa7.12□□□□□ -1.27
EPHA3-201ENST00000336596 HSPA7P48741 367 aa7.12□□□□□ -1.27
EPHA3-201ENST00000336596 CLDN10P78369 228 aa7.12□□□□□ -1.27
EPHA3-201ENST00000336596 TGFBR3Q03167 851 aa7.12□□□□□ -1.27
EPHA3-201ENST00000336596 GALNT2Q10471 571 aa7.12□□□□□ -1.27
EPHA3-201ENST00000336596 METTL21CQ5VZV1 264 aa7.12□□□□□ -1.27
EPHA3-201ENST00000336596 HEATR4Q86WZ0 1026 aa7.12□□□□□ -1.27
EPHA3-201ENST00000336596 SPATA22Q8NHS9 363 aa7.12□□□□□ -1.27
EPHA3-201ENST00000336596 PPP1R35Q8TAP8 253 aa7.12□□□□□ -1.27
EPHA3-201ENST00000336596 PWWP2AQ96N64 755 aa7.12□□□□□ -1.27
EPHA3-201ENST00000336596 EPHX3Q9H6B9 360 aa7.12□□□□□ -1.27
EPHA3-201ENST00000336596 B4GALT6Q9UBX8 382 aa7.12□□□□□ -1.27
EPHA3-201ENST00000336596 HS3ST3A1Q9Y663 406 aa7.12□□□□□ -1.27
EPHA3-201ENST00000336596 ZNF670-ZNF695F2Z2N8 137 aa7.12□□□□□ -1.27
EPHA3-201ENST00000336596 LOC110117498-PIK3R3F6TDL0 507 aa7.12□□□□□ -1.27
EPHA3-201ENST00000336596 WRBO00258 174 aa7.12□□□□□ -1.27
EPHA3-201ENST00000336596 TFECO14948 347 aaPredicted RBP7.12□□□□□ -1.27
EPHA3-201ENST00000336596 ATG12O94817 140 aa7.12□□□□□ -1.27
EPHA3-201ENST00000336596 WDPCPO95876 746 aa7.12□□□□□ -1.27
EPHA3-201ENST00000336596 HTR3AP46098 478 aa7.12□□□□□ -1.27
EPHA3-201ENST00000336596 PIGWQ7Z7B1 504 aa7.12□□□□□ -1.27
EPHA3-201ENST00000336596 NXPE1Q8N323 547 aa7.12□□□□□ -1.27
EPHA3-201ENST00000336596 KDM1BQ8NB78 822 aa7.12□□□□□ -1.27
EPHA3-201ENST00000336596 PIK3R3Q92569 461 aa7.12□□□□□ -1.27
EPHA3-201ENST00000336596 SLC2A13Q96QE2 648 aa7.12□□□□□ -1.27
EPHA3-201ENST00000336596 SMG9Q9H0W8 520 aaKnown RBP7.12□□□□□ -1.27
EPHA3-201ENST00000336596 MRPL39Q9NYK5 338 aaKnown RBP7.12□□□□□ -1.27
EPHA3-201ENST00000336596 BTRCQ9Y297 605 aa7.12□□□□□ -1.27
EPHA3-201ENST00000336596 MEMO1Q9Y316 297 aa7.12□□□□□ -1.27
EPHA3-201ENST00000336596 RLN1P04808 185 aa7.11□□□□□ -1.27
EPHA3-201ENST00000336596 MSL3P1P0C860 447 aa7.11□□□□□ -1.27
EPHA3-201ENST00000336596 EBLN1P0CF75 366 aa7.11□□□□□ -1.27
EPHA3-201ENST00000336596 ATP6V1B1P15313 513 aa7.11□□□□□ -1.27
EPHA3-201ENST00000336596 MATN1P21941 496 aa7.11□□□□□ -1.27
EPHA3-201ENST00000336596 SLC6A8P48029 635 aa7.11□□□□□ -1.27
EPHA3-201ENST00000336596 PLA2G16P53816 162 aa7.11□□□□□ -1.27
EPHA3-201ENST00000336596 TLR1Q15399 786 aa7.11□□□□□ -1.27
EPHA3-201ENST00000336596 LIN52Q52LA3 116 aa7.11□□□□□ -1.27
EPHA3-201ENST00000336596 TMEM201Q5SNT2 666 aa7.11□□□□□ -1.27
EPHA3-201ENST00000336596 DPPA4Q7L190 304 aa7.11□□□□□ -1.27
EPHA3-201ENST00000336596 CPNE8Q86YQ8 564 aa7.11□□□□□ -1.27
EPHA3-201ENST00000336596 OR6Y1Q8NGX8 325 aa7.11□□□□□ -1.27
EPHA3-201ENST00000336596 ZNF689Q96CS4 500 aaPredicted RBP7.11□□□□□ -1.27
EPHA3-201ENST00000336596 PRR11Q96HE9 360 aaPredicted RBP7.11□□□□□ -1.27
EPHA3-201ENST00000336596 RTKNQ9BST9 563 aa7.11□□□□□ -1.27
EPHA3-201ENST00000336596 DERL2Q9GZP9 239 aa7.11□□□□□ -1.27
EPHA3-201ENST00000336596 CMTM6Q9NX76 183 aa7.11□□□□□ -1.27
EPHA3-201ENST00000336596 COQ3Q9NZJ6 369 aa7.11□□□□□ -1.27
EPHA3-201ENST00000336596 COL4A5P29400 1685 aa7.11□□□□□ -1.27
EPHA3-201ENST00000336596 H3BQ06 376 aaPredicted RBP7.11□□□□□ -1.27
EPHA3-201ENST00000336596 BEST1O76090 585 aa7.11□□□□□ -1.27
EPHA3-201ENST00000336596 ARHGEF15O94989 841 aa7.11□□□□□ -1.27
EPHA3-201ENST00000336596 COX4I1P13073 169 aa7.11□□□□□ -1.27
EPHA3-201ENST00000336596 CEBPBP17676 345 aa7.11□□□□□ -1.27
EPHA3-201ENST00000336596 KIR2DL3P43628 341 aa7.11□□□□□ -1.27
EPHA3-201ENST00000336596 AGTR2P50052 363 aa7.11□□□□□ -1.27
EPHA3-201ENST00000336596 CSNK2A1P68400 391 aaPredicted RBP7.11□□□□□ -1.27
EPHA3-201ENST00000336596 ZNF844Q08AG5 666 aa7.11□□□□□ -1.27
EPHA3-201ENST00000336596 DUSP6Q16828 381 aa7.11□□□□□ -1.27
EPHA3-201ENST00000336596 SIRPB2Q5JXA9 342 aa7.11□□□□□ -1.27
EPHA3-201ENST00000336596 GPRC6AQ5T6X5 926 aa7.11□□□□□ -1.27
EPHA3-201ENST00000336596 ZNF57Q68EA5 555 aaPredicted RBP7.11□□□□□ -1.27
EPHA3-201ENST00000336596 TMIGD1Q6UXZ0 262 aa7.11□□□□□ -1.27
EPHA3-201ENST00000336596 PPP1R3BQ86XI6 285 aa7.11□□□□□ -1.27
EPHA3-201ENST00000336596 UMODL1-AS1Q8N2C9 162 aa7.11□□□□□ -1.27
EPHA3-201ENST00000336596 OR52E4Q8NGH9 312 aa7.11□□□□□ -1.27
EPHA3-201ENST00000336596 TOE1Q96GM8 510 aaKnown RBP7.11□□□□□ -1.27
EPHA3-201ENST00000336596 MGME1Q9BQP7 344 aa7.11□□□□□ -1.27
EPHA3-201ENST00000336596 CDH20Q9HBT6 801 aa7.11□□□□□ -1.27
EPHA3-201ENST00000336596 GPN1Q9HCN4 374 aaPredicted RBP7.11□□□□□ -1.27
EPHA3-201ENST00000336596 FAM120CQ9NX05 1096 aaKnown RBP7.11□□□□□ -1.27
EPHA3-201ENST00000336596 MRPS2Q9Y399 296 aaKnown RBP7.11□□□□□ -1.27
EPHA3-201ENST00000336596 PHYHO14832 338 aa7.11□□□□□ -1.27
EPHA3-201ENST00000336596 DCXO43602 365 aa7.11□□□□□ -1.27
EPHA3-201ENST00000336596 RFPL2O75678 378 aa7.11□□□□□ -1.27
EPHA3-201ENST00000336596 CST1P01037 141 aa7.11□□□□□ -1.27
EPHA3-201ENST00000336596 SRFP11831 508 aa7.11□□□□□ -1.27
EPHA3-201ENST00000336596 HLA-EP13747 358 aa7.11□□□□□ -1.27
EPHA3-201ENST00000336596 SLC1A2P43004 574 aa7.11□□□□□ -1.27
EPHA3-201ENST00000336596 GPR143P51810 404 aa7.11□□□□□ -1.27
EPHA3-201ENST00000336596 ATP12AP54707 1039 aa7.11□□□□□ -1.27
EPHA3-201ENST00000336596 EPHA4P54764 986 aa7.11□□□□□ -1.27
EPHA3-201ENST00000336596 VSX2P58304 361 aaPredicted RBP7.11□□□□□ -1.27
EPHA3-201ENST00000336596 DSTNP60981 165 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms