RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 CARS2Q9HA77 564 aaKnown RBP6.28□□□□□ -1.4
HMG20A-201ENST00000336216 ABCB9Q9NP78 766 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 FZD3Q9NPG1 666 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 SPHK2Q9NRA0 654 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 KLHL28Q9NXS3 571 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 SEC14L3Q9UDX4 400 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 CD300AQ9UGN4 299 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 KLHL20Q9Y2M5 609 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 DHRS7Q9Y394 339 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 SPACA6W5XKT8 324 aa6.28□□□□□ -1.4
HMG20A-201ENST00000336216 EFCAB10A6NFE3 127 aa6.27□□□□□ -1.41
HMG20A-201ENST00000336216 TRIM64CA6NLI5 447 aa6.27□□□□□ -1.41
HMG20A-201ENST00000336216 CACNB4O00305 520 aaPredicted RBP6.27□□□□□ -1.41
HMG20A-201ENST00000336216 SLC1A7O00341 560 aa6.27□□□□□ -1.41
HMG20A-201ENST00000336216 GNB5O14775 395 aa6.27□□□□□ -1.41
HMG20A-201ENST00000336216 ZW10O43264 779 aa6.27□□□□□ -1.41
HMG20A-201ENST00000336216 PCDH7O60245 1069 aa6.27□□□□□ -1.41
HMG20A-201ENST00000336216 CA3P07451 260 aa6.27□□□□□ -1.41
HMG20A-201ENST00000336216 TCF3P15923 654 aa6.27□□□□□ -1.41
HMG20A-201ENST00000336216 ZNF33AQ06730 810 aa6.27□□□□□ -1.41
HMG20A-201ENST00000336216 TOP3AQ13472 1001 aaPredicted RBP6.27□□□□□ -1.41
HMG20A-201ENST00000336216 RAPSNQ13702 412 aa6.27□□□□□ -1.41
HMG20A-201ENST00000336216 USP39Q53GS9 565 aaKnown RBP6.27□□□□□ -1.41
HMG20A-201ENST00000336216 INO80DQ53TQ3 878 aaPredicted RBP6.27□□□□□ -1.41
HMG20A-201ENST00000336216 LETMD1Q6P1Q0 360 aa6.27□□□□□ -1.41
HMG20A-201ENST00000336216 PLEKHG7Q6ZR37 379 aa6.27□□□□□ -1.41
HMG20A-201ENST00000336216 CYP4Z1Q86W10 505 aa6.27□□□□□ -1.41
HMG20A-201ENST00000336216 FAM20CQ8IXL6 584 aa6.27□□□□□ -1.41
HMG20A-201ENST00000336216 GHDCQ8N2G8 530 aa6.27□□□□□ -1.41
HMG20A-201ENST00000336216 CAMKK1Q8N5S9 505 aa6.27□□□□□ -1.41
HMG20A-201ENST00000336216 FAM86B1Q8N7N1 296 aa6.27□□□□□ -1.41
HMG20A-201ENST00000336216 TTC29Q8NA56 475 aaPredicted RBP6.27□□□□□ -1.41
HMG20A-201ENST00000336216 GPR26Q8NDV2 337 aa6.27□□□□□ -1.41
HMG20A-201ENST00000336216 OR13F1Q8NGS4 319 aa6.27□□□□□ -1.41
HMG20A-201ENST00000336216 RAD51AP1Q96B01 352 aa6.27□□□□□ -1.41
HMG20A-201ENST00000336216 LGALS12Q96DT0 336 aa6.27□□□□□ -1.41
HMG20A-201ENST00000336216 LMLNQ96KR4 655 aa6.27□□□□□ -1.41
HMG20A-201ENST00000336216 EGLN2Q96KS0 407 aa6.27□□□□□ -1.41
HMG20A-201ENST00000336216 PKP4Q99569 1192 aa6.27□□□□□ -1.41
HMG20A-201ENST00000336216 TTYH2Q9BSA4 534 aa6.27□□□□□ -1.41
HMG20A-201ENST00000336216 TMEM175Q9BSA9 504 aa6.27□□□□□ -1.41
HMG20A-201ENST00000336216 C11orf84Q9BUA3 381 aaPredicted RBP6.27□□□□□ -1.41
HMG20A-201ENST00000336216 DUSP26Q9BV47 211 aa6.27□□□□□ -1.41
HMG20A-201ENST00000336216 ZNF334Q9HCZ1 680 aaPredicted RBP6.27□□□□□ -1.41
HMG20A-201ENST00000336216 PHPT1Q9NRX4 125 aaPredicted RBP6.27□□□□□ -1.41
HMG20A-201ENST00000336216 C5AR2Q9P296 337 aa6.27□□□□□ -1.41
HMG20A-201ENST00000336216 DNAJB9Q9UBS3 223 aa6.27□□□□□ -1.41
HMG20A-201ENST00000336216 IL36AQ9UHA7 158 aa6.27□□□□□ -1.41
HMG20A-201ENST00000336216 WBP11Q9Y2W2 641 aaKnown RBP6.27□□□□□ -1.41
HMG20A-201ENST00000336216 PCDHGA11Q9Y5H2 935 aa6.27□□□□□ -1.41
HMG20A-201ENST00000336216 DNMT3AQ9Y6K1 912 aaPredicted RBP6.27□□□□□ -1.41
HMG20A-201ENST00000336216 ZFC3H1O60293 1989 aaKnown RBP6.27□□□□□ -1.41
HMG20A-201ENST00000336216 RTTNQ86VV8 2226 aa6.27□□□□□ -1.41
HMG20A-201ENST00000336216 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.27□□□□□ -1.41
HMG20A-201ENST00000336216 PIPSLA2A3N6 862 aa6.27□□□□□ -1.41
HMG20A-201ENST00000336216 PAPSS2O95340 614 aaPredicted RBP6.27□□□□□ -1.41
HMG20A-201ENST00000336216 CSF2P04141 144 aa6.27□□□□□ -1.41
HMG20A-201ENST00000336216 APODP05090 189 aa6.27□□□□□ -1.41
HMG20A-201ENST00000336216 BMP4P12644 408 aa6.27□□□□□ -1.41
HMG20A-201ENST00000336216 ALAS2P22557 587 aa6.27□□□□□ -1.41
HMG20A-201ENST00000336216 CRHBPP24387 322 aa6.27□□□□□ -1.41
HMG20A-201ENST00000336216 PIGAP37287 484 aa6.27□□□□□ -1.41
HMG20A-201ENST00000336216 FEN1P39748 380 aaKnown RBP6.27□□□□□ -1.41
HMG20A-201ENST00000336216 TM4SF4P48230 202 aa6.27□□□□□ -1.41
HMG20A-201ENST00000336216 MLLT10P55197 1068 aa6.27□□□□□ -1.41
HMG20A-201ENST00000336216 ARPC4P59998 168 aa6.27□□□□□ -1.41
HMG20A-201ENST00000336216 RPS13P62277 151 aaKnown RBP6.27□□□□□ -1.41
HMG20A-201ENST00000336216 INAVAQ3KP66 663 aa6.27□□□□□ -1.41
HMG20A-201ENST00000336216 ARMCX4Q5H9R4 360 aa6.27□□□□□ -1.41
HMG20A-201ENST00000336216 RBM48Q5RL73 367 aaKnown RBP6.27□□□□□ -1.41
HMG20A-201ENST00000336216 TRIM40Q6P9F5 258 aa6.27□□□□□ -1.41
HMG20A-201ENST00000336216 CCBE1Q6UXH8 406 aaPredicted RBP6.27□□□□□ -1.41
HMG20A-201ENST00000336216 RNF44Q7L0R7 432 aa6.27□□□□□ -1.41
HMG20A-201ENST00000336216 THOC6Q86W42 341 aaKnown RBP6.27□□□□□ -1.41
HMG20A-201ENST00000336216 GPR65Q8IYL9 337 aa6.27□□□□□ -1.41
HMG20A-201ENST00000336216 MINDY1Q8N5J2 469 aa6.27□□□□□ -1.41
HMG20A-201ENST00000336216 SLC43A3Q8NBI5 491 aa6.27□□□□□ -1.41
HMG20A-201ENST00000336216 HMGCLL1Q8TB92 370 aa6.27□□□□□ -1.41
HMG20A-201ENST00000336216 WFDC5Q8TCV5 224 aa6.27□□□□□ -1.41
HMG20A-201ENST00000336216 BPIFB1Q8TDL5 484 aa6.27□□□□□ -1.41
HMG20A-201ENST00000336216 LCN9Q8WX39 176 aa6.27□□□□□ -1.41
HMG20A-201ENST00000336216 NT5C3BQ969T7 300 aa6.27□□□□□ -1.41
HMG20A-201ENST00000336216 TIFAQ96CG3 184 aa6.27□□□□□ -1.41
HMG20A-201ENST00000336216 IL4I1Q96RQ9 567 aa6.27□□□□□ -1.41
HMG20A-201ENST00000336216 BRINP2Q9C0B6 783 aa6.27□□□□□ -1.41
HMG20A-201ENST00000336216 PAK1IP1Q9NWT1 392 aaPredicted RBP6.27□□□□□ -1.41
HMG20A-201ENST00000336216 ELOVL2Q9NXB9 296 aa6.27□□□□□ -1.41
HMG20A-201ENST00000336216 FBXL12Q9NXK8 326 aa6.27□□□□□ -1.41
HMG20A-201ENST00000336216 RPS6KA6Q9UK32 745 aa6.27□□□□□ -1.41
HMG20A-201ENST00000336216 UTS2RQ9UKP6 389 aa6.27□□□□□ -1.41
HMG20A-201ENST00000336216 CLEC4EQ9ULY5 219 aa6.27□□□□□ -1.41
HMG20A-201ENST00000336216 MRPS7Q9Y2R9 242 aaKnown RBP6.27□□□□□ -1.41
HMG20A-201ENST00000336216 A0A1B0GTL3 188 aa6.27□□□□□ -1.41
HMG20A-201ENST00000336216 FAM234BA2RU67 622 aa6.27□□□□□ -1.41
HMG20A-201ENST00000336216 M0QX08 132 aa6.27□□□□□ -1.41
HMG20A-201ENST00000336216 HSD17B1P14061 328 aa6.27□□□□□ -1.41
HMG20A-201ENST00000336216 CD72P21854 359 aa6.27□□□□□ -1.41
HMG20A-201ENST00000336216 IDSP22304 550 aa6.27□□□□□ -1.41
HMG20A-201ENST00000336216 NTSP30990 170 aa6.27□□□□□ -1.41
HMG20A-201ENST00000336216 EEFSECP57772 596 aaKnown RBP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms