RNA–Protein interactions for RNA: ENST00000334731.6

C9orf85-201, Transcript of chromosome 9 open reading frame 85, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf85, Length 1,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-201ENST00000334731 SBSNQ6UWP8 590 aa10.62□□□□□ -0.71
C9orf85-201ENST00000334731 ISLR2Q6UXK2 745 aa10.62□□□□□ -0.71
C9orf85-201ENST00000334731 ASPGQ86U10 573 aa10.62□□□□□ -0.71
C9orf85-201ENST00000334731 SLC26A11Q86WA9 606 aa10.62□□□□□ -0.71
C9orf85-201ENST00000334731 ZBED8Q8IZ13 594 aa10.62□□□□□ -0.71
C9orf85-201ENST00000334731 MFSD9Q8NBP5 474 aa10.62□□□□□ -0.71
C9orf85-201ENST00000334731 KCT2Q8NC54 265 aa10.62□□□□□ -0.71
C9orf85-201ENST00000334731 CAMKVQ8NCB2 501 aa10.62□□□□□ -0.71
C9orf85-201ENST00000334731 BBOF1Q8ND07 529 aa10.62□□□□□ -0.71
C9orf85-201ENST00000334731 SPATA4Q8NEY3 305 aa10.62□□□□□ -0.71
C9orf85-201ENST00000334731 PPP4R1Q8TF05 950 aa10.62□□□□□ -0.71
C9orf85-201ENST00000334731 SLC13A3Q8WWT9 602 aa10.62□□□□□ -0.71
C9orf85-201ENST00000334731 ATL1Q8WXF7 558 aa10.62□□□□□ -0.71
C9orf85-201ENST00000334731 PSMF1Q92530 271 aa10.62□□□□□ -0.71
C9orf85-201ENST00000334731 PSMG3-AS1Q96PY0 264 aa10.62□□□□□ -0.71
C9orf85-201ENST00000334731 LMF1Q96S06 567 aa10.62□□□□□ -0.71
C9orf85-201ENST00000334731 BARD1Q99728 777 aaKnown RBP10.62□□□□□ -0.71
C9orf85-201ENST00000334731 ERP44Q9BS26 406 aa10.62□□□□□ -0.71
C9orf85-201ENST00000334731 MCMBPQ9BTE3 642 aa10.62□□□□□ -0.71
C9orf85-201ENST00000334731 SARGQ9BW04 601 aa10.62□□□□□ -0.71
C9orf85-201ENST00000334731 FAM129AQ9BZQ8 928 aa10.62□□□□□ -0.71
C9orf85-201ENST00000334731 MKL2Q9ULH7 1088 aa10.62□□□□□ -0.71
C9orf85-201ENST00000334731 NOVA2Q9UNW9 492 aaKnown RBP10.62□□□□□ -0.71
C9orf85-201ENST00000334731 NTNG1Q9Y2I2 539 aa10.62□□□□□ -0.71
C9orf85-201ENST00000334731 COPG1Q9Y678 874 aaKnown RBP10.62□□□□□ -0.71
C9orf85-201ENST00000334731 CCDC88CQ9P219 2028 aa10.62□□□□□ -0.71
C9orf85-201ENST00000334731 RP1L1Q8IWN7 2480 aaPredicted RBP10.61□□□□□ -0.71
C9orf85-201ENST00000334731 USP9YO00507 2555 aaPredicted RBP10.61□□□□□ -0.71
C9orf85-201ENST00000334731 FAM95CA0A1B0GW59 222 aa10.61□□□□□ -0.71
C9orf85-201ENST00000334731 PABPN1LA6NDY0 278 aaKnown RBP10.61□□□□□ -0.71
C9orf85-201ENST00000334731 FAM187AA6NFU0 413 aa10.61□□□□□ -0.71
C9orf85-201ENST00000334731 SGK494L7N484 410 aa10.61□□□□□ -0.71
C9orf85-201ENST00000334731 CDC7O00311 574 aa10.61□□□□□ -0.71
C9orf85-201ENST00000334731 NDC80O14777 642 aa10.61□□□□□ -0.71
C9orf85-201ENST00000334731 PIAS1O75925 651 aa10.61□□□□□ -0.71
C9orf85-201ENST00000334731 SERPINA7P05543 415 aa10.61□□□□□ -0.71
C9orf85-201ENST00000334731 PRR35P0CG20 571 aa10.61□□□□□ -0.71
C9orf85-201ENST00000334731 ZNF37AP17032 561 aaPredicted RBP10.61□□□□□ -0.71
C9orf85-201ENST00000334731 IL1RNP18510 177 aa10.61□□□□□ -0.71
C9orf85-201ENST00000334731 GRK3P35626 688 aa10.61□□□□□ -0.71
C9orf85-201ENST00000334731 SOX11P35716 441 aa10.61□□□□□ -0.71
C9orf85-201ENST00000334731 MEF2AQ02078 507 aaPredicted RBP10.61□□□□□ -0.71
C9orf85-201ENST00000334731 EEF1A2Q05639 463 aaKnown RBP10.61□□□□□ -0.71
C9orf85-201ENST00000334731 MFAP5Q13361 173 aa10.61□□□□□ -0.71
C9orf85-201ENST00000334731 ZNF460Q14592 562 aa10.61□□□□□ -0.71
C9orf85-201ENST00000334731 LAPTM4AQ15012 233 aa10.61□□□□□ -0.71
C9orf85-201ENST00000334731 PPP1R3AQ16821 1122 aa10.61□□□□□ -0.71
C9orf85-201ENST00000334731 CATSPEREQ5SY80 951 aa10.61□□□□□ -0.71
C9orf85-201ENST00000334731 LINC00696Q6ZRV3 163 aa10.61□□□□□ -0.71
C9orf85-201ENST00000334731 PDSS2Q86YH6 399 aa10.61□□□□□ -0.71
C9orf85-201ENST00000334731 NKAPQ8N5F7 415 aaKnown RBP10.61□□□□□ -0.71
C9orf85-201ENST00000334731 AMER2Q8N7J2 671 aa10.61□□□□□ -0.71
C9orf85-201ENST00000334731 CATSPER1Q8NEC5 780 aa10.61□□□□□ -0.71
C9orf85-201ENST00000334731 OR51Q1Q8NH59 317 aa10.61□□□□□ -0.71
C9orf85-201ENST00000334731 PYROXD1Q8WU10 500 aa10.61□□□□□ -0.71
C9orf85-201ENST00000334731 ANKRD7Q92527 254 aa10.61□□□□□ -0.71
C9orf85-201ENST00000334731 NEIL2Q969S2 332 aa10.61□□□□□ -0.71
C9orf85-201ENST00000334731 MOCOSQ96EN8 888 aa10.61□□□□□ -0.71
C9orf85-201ENST00000334731 IMMP1LQ96LU5 166 aa10.61□□□□□ -0.71
C9orf85-201ENST00000334731 CYTH2Q99418 400 aa10.61□□□□□ -0.71
C9orf85-201ENST00000334731 SLC29A3Q9BZD2 475 aa10.61□□□□□ -0.71
C9orf85-201ENST00000334731 VN1R1Q9GZP7 353 aa10.61□□□□□ -0.71
C9orf85-201ENST00000334731 ZNF700Q9H0M5 742 aa10.61□□□□□ -0.71
C9orf85-201ENST00000334731 SMYD2Q9NRG4 433 aa10.61□□□□□ -0.71
C9orf85-201ENST00000334731 HCN3Q9P1Z3 774 aa10.61□□□□□ -0.71
C9orf85-201ENST00000334731 WHRNQ9P202 907 aa10.61□□□□□ -0.71
C9orf85-201ENST00000334731 SLC22A7Q9Y694 548 aa10.61□□□□□ -0.71
C9orf85-201ENST00000334731 BLACEA4D250 179 aa10.6□□□□□ -0.71
C9orf85-201ENST00000334731 OR2W5A6NFC9 320 aa10.6□□□□□ -0.71
C9orf85-201ENST00000334731 RAD51CO43502 376 aa10.6□□□□□ -0.71
C9orf85-201ENST00000334731 OR1F1O43749 312 aa10.6□□□□□ -0.71
C9orf85-201ENST00000334731 SEMA7AO75326 666 aa10.6□□□□□ -0.71
C9orf85-201ENST00000334731 CELA2AP08217 269 aa10.6□□□□□ -0.71
C9orf85-201ENST00000334731 SLC35G6P0C7Q6 338 aa10.6□□□□□ -0.71
C9orf85-201ENST00000334731 C8orf89P0DMQ9 161 aa10.6□□□□□ -0.71
C9orf85-201ENST00000334731 XCR1P46094 333 aa10.6□□□□□ -0.71
C9orf85-201ENST00000334731 GABPB1Q06547 395 aaPredicted RBP10.6□□□□□ -0.71
C9orf85-201ENST00000334731 PWP1Q13610 501 aa10.6□□□□□ -0.71
C9orf85-201ENST00000334731 CSHL1Q14406 222 aa10.6□□□□□ -0.71
C9orf85-201ENST00000334731 ZNF169Q14929 603 aaPredicted RBP10.6□□□□□ -0.71
C9orf85-201ENST00000334731 PCOLCEQ15113 449 aa10.6□□□□□ -0.71
C9orf85-201ENST00000334731 TLR1Q15399 786 aa10.6□□□□□ -0.71
C9orf85-201ENST00000334731 NR6A1Q15406 480 aa10.6□□□□□ -0.71
C9orf85-201ENST00000334731 RIPOR1Q6ZS17 1223 aa10.6□□□□□ -0.71
C9orf85-201ENST00000334731 MAATS1Q7Z4T9 603 aa10.6□□□□□ -0.71
C9orf85-201ENST00000334731 THOC6Q86W42 341 aaKnown RBP10.6□□□□□ -0.71
C9orf85-201ENST00000334731 CEP97Q8IW35 865 aa10.6□□□□□ -0.71
C9orf85-201ENST00000334731 C17orf53Q8N3J3 647 aaPredicted RBP10.6□□□□□ -0.71
C9orf85-201ENST00000334731 AFAP1L2Q8N4X5 818 aa10.6□□□□□ -0.71
C9orf85-201ENST00000334731 ZNF740Q8NDX6 193 aa10.6□□□□□ -0.71
C9orf85-201ENST00000334731 ZCCHC10Q8TBK6 192 aa10.6□□□□□ -0.71
C9orf85-201ENST00000334731 BRIX1Q8TDN6 353 aaKnown RBP10.6□□□□□ -0.71
C9orf85-201ENST00000334731 ANKRD49Q8WVL7 239 aa10.6□□□□□ -0.71
C9orf85-201ENST00000334731 SLC5A11Q8WWX8 675 aa10.6□□□□□ -0.71
C9orf85-201ENST00000334731 METTL21AQ8WXB1 218 aa10.6□□□□□ -0.71
C9orf85-201ENST00000334731 VPS39Q96JC1 886 aa10.6□□□□□ -0.71
C9orf85-201ENST00000334731 DPH5Q9H2P9 285 aa10.6□□□□□ -0.71
C9orf85-201ENST00000334731 RHOJQ9H4E5 214 aa10.6□□□□□ -0.71
C9orf85-201ENST00000334731 EPS8L2Q9H6S3 715 aa10.6□□□□□ -0.71
C9orf85-201ENST00000334731 ANKHQ9HCJ1 492 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms