RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 CES3Q6UWW8 571 aa6.05□□□□□ -1.44
SMG1-201ENST00000330588 IGFL3Q6UXB1 125 aa6.05□□□□□ -1.44
SMG1-201ENST00000330588 NAPRTQ6XQN6 538 aa6.05□□□□□ -1.44
SMG1-201ENST00000330588 CYHR1Q6ZMK1 362 aa6.05□□□□□ -1.44
SMG1-201ENST00000330588 OVCH1Q7RTY7 1134 aa6.05□□□□□ -1.44
SMG1-201ENST00000330588 TRIM73Q86UV7 250 aa6.05□□□□□ -1.44
SMG1-201ENST00000330588 SLC26A11Q86WA9 606 aa6.05□□□□□ -1.44
SMG1-201ENST00000330588 CFAP61Q8NHU2 1237 aa6.05□□□□□ -1.44
SMG1-201ENST00000330588 MCOLN3Q8TDD5 553 aa6.05□□□□□ -1.44
SMG1-201ENST00000330588 SKA2Q8WVK7 121 aaPredicted RBP6.05□□□□□ -1.44
SMG1-201ENST00000330588 PTERQ96BW5 349 aa6.05□□□□□ -1.44
SMG1-201ENST00000330588 CERS2Q96G23 380 aa6.05□□□□□ -1.44
SMG1-201ENST00000330588 SNF8Q96H20 258 aa6.05□□□□□ -1.44
SMG1-201ENST00000330588 PDLIM5Q96HC4 596 aaKnown RBP6.05□□□□□ -1.44
SMG1-201ENST00000330588 SCYL1Q96KG9 808 aa6.05□□□□□ -1.44
SMG1-201ENST00000330588 CCDC138Q96M89 665 aa6.05□□□□□ -1.44
SMG1-201ENST00000330588 SMAD5Q99717 465 aaKnown RBP6.05□□□□□ -1.44
SMG1-201ENST00000330588 SELENOSQ9BQE4 189 aa6.05□□□□□ -1.44
SMG1-201ENST00000330588 SARGQ9BW04 601 aa6.05□□□□□ -1.44
SMG1-201ENST00000330588 DDX47Q9H0S4 455 aaKnown RBP6.05□□□□□ -1.44
SMG1-201ENST00000330588 ING2Q9H160 280 aa6.05□□□□□ -1.44
SMG1-201ENST00000330588 CLMPQ9H6B4 373 aa6.05□□□□□ -1.44
SMG1-201ENST00000330588 ACSS2Q9NR19 701 aa6.05□□□□□ -1.44
SMG1-201ENST00000330588 SEMA3GQ9NS98 782 aa6.05□□□□□ -1.44
SMG1-201ENST00000330588 CUTCQ9NTM9 273 aa6.05□□□□□ -1.44
SMG1-201ENST00000330588 C20orf96Q9NUD7 363 aaPredicted RBP6.05□□□□□ -1.44
SMG1-201ENST00000330588 IFT80Q9P2H3 777 aaPredicted RBP6.05□□□□□ -1.44
SMG1-201ENST00000330588 NDOR1Q9UHB4 597 aa6.05□□□□□ -1.44
SMG1-201ENST00000330588 TLK1Q9UKI8 766 aa6.05□□□□□ -1.44
SMG1-201ENST00000330588 PLAGL1Q9UM63 463 aa6.05□□□□□ -1.44
SMG1-201ENST00000330588 CDC14AQ9UNH5 594 aa6.05□□□□□ -1.44
SMG1-201ENST00000330588 NFS1Q9Y697 457 aa6.05□□□□□ -1.44
SMG1-201ENST00000330588 TEX264Q9Y6I9 313 aa6.05□□□□□ -1.44
SMG1-201ENST00000330588 BPTFQ12830 3046 aa6.04□□□□□ -1.44
SMG1-201ENST00000330588 KCNE1BA0A087WTH5 132 aa6.04□□□□□ -1.44
SMG1-201ENST00000330588 ZNF503-AS2A6NEH8 195 aa6.04□□□□□ -1.44
SMG1-201ENST00000330588 VSTM2BA6NLU5 285 aa6.04□□□□□ -1.44
SMG1-201ENST00000330588 E7ENX8 843 aa6.04□□□□□ -1.44
SMG1-201ENST00000330588 HAUS5O94927 633 aa6.04□□□□□ -1.44
SMG1-201ENST00000330588 SEC31AO94979 1220 aaKnown RBP6.04□□□□□ -1.44
SMG1-201ENST00000330588 SLC16A8O95907 504 aa6.04□□□□□ -1.44
SMG1-201ENST00000330588 GSTA2P09210 222 aa6.04□□□□□ -1.44
SMG1-201ENST00000330588 IMPDH2P12268 514 aa6.04□□□□□ -1.44
SMG1-201ENST00000330588 MMP11P24347 488 aa6.04□□□□□ -1.44
SMG1-201ENST00000330588 RPA3P35244 121 aaPredicted RBP6.04□□□□□ -1.44
SMG1-201ENST00000330588 CARSP49589 748 aaKnown RBP6.04□□□□□ -1.44
SMG1-201ENST00000330588 PGDP52209 483 aa6.04□□□□□ -1.44
SMG1-201ENST00000330588 CSE1LP55060 971 aaKnown RBP6.04□□□□□ -1.44
SMG1-201ENST00000330588 GNG11P61952 73 aa6.04□□□□□ -1.44
SMG1-201ENST00000330588 TAP2Q03519 686 aa6.04□□□□□ -1.44
SMG1-201ENST00000330588 CTBP1Q13363 440 aa6.04□□□□□ -1.44
SMG1-201ENST00000330588 FAM53BQ14153 422 aa6.04□□□□□ -1.44
SMG1-201ENST00000330588 NKPD1Q17RQ9 610 aa6.04□□□□□ -1.44
SMG1-201ENST00000330588 PTCHD3Q3KNS1 767 aa6.04□□□□□ -1.44
SMG1-201ENST00000330588 KRTAP19-4Q3LI73 84 aa6.04□□□□□ -1.44
SMG1-201ENST00000330588 HSP90AA5PQ58FG0 334 aa6.04□□□□□ -1.44
SMG1-201ENST00000330588 ATP1A1-AS1Q5TC04 95 aa6.04□□□□□ -1.44
SMG1-201ENST00000330588 VWA5B1Q5TIE3 1220 aa6.04□□□□□ -1.44
SMG1-201ENST00000330588 PRAMEF17Q5VTA0 474 aa6.04□□□□□ -1.44
SMG1-201ENST00000330588 LCN10Q6JVE6 187 aa6.04□□□□□ -1.44
SMG1-201ENST00000330588 FAM45BPQ6NSW5 357 aa6.04□□□□□ -1.44
SMG1-201ENST00000330588 CNSTQ6PJW8 725 aa6.04□□□□□ -1.44
SMG1-201ENST00000330588 ASB18Q6ZVZ8 466 aa6.04□□□□□ -1.44
SMG1-201ENST00000330588 ZNF572Q7Z3I7 529 aaPredicted RBP6.04□□□□□ -1.44
SMG1-201ENST00000330588 MRGPREQ86SM8 312 aa6.04□□□□□ -1.44
SMG1-201ENST00000330588 PAQR7Q86WK9 346 aa6.04□□□□□ -1.44
SMG1-201ENST00000330588 DENND6AQ8IWF6 608 aa6.04□□□□□ -1.44
SMG1-201ENST00000330588 LRRC56Q8IYG6 542 aaPredicted RBP6.04□□□□□ -1.44
SMG1-201ENST00000330588 ZNF655Q8N720 491 aaPredicted RBP6.04□□□□□ -1.44
SMG1-201ENST00000330588 FAM45AQ8TCE6 357 aa6.04□□□□□ -1.44
SMG1-201ENST00000330588 ZNF480Q8WV37 535 aa6.04□□□□□ -1.44
SMG1-201ENST00000330588 IL17FQ96PD4 163 aa6.04□□□□□ -1.44
SMG1-201ENST00000330588 GPR21Q99679 349 aa6.04□□□□□ -1.44
SMG1-201ENST00000330588 NRTNQ99748 197 aa6.04□□□□□ -1.44
SMG1-201ENST00000330588 SLC25A23Q9BV35 468 aa6.04□□□□□ -1.44
SMG1-201ENST00000330588 KRTAP9-8Q9BYQ0 159 aa6.04□□□□□ -1.44
SMG1-201ENST00000330588 SPRTNQ9H040 489 aaPredicted RBP6.04□□□□□ -1.44
SMG1-201ENST00000330588 PARVBQ9HBI1 364 aa6.04□□□□□ -1.44
SMG1-201ENST00000330588 POPDC3Q9HBV1 291 aa6.04□□□□□ -1.44
SMG1-201ENST00000330588 SSU72Q9NP77 194 aaKnown RBP6.04□□□□□ -1.44
SMG1-201ENST00000330588 MRPS30Q9NP92 439 aaKnown RBP6.04□□□□□ -1.44
SMG1-201ENST00000330588 FBXO6Q9NRD1 293 aaPredicted RBP6.04□□□□□ -1.44
SMG1-201ENST00000330588 TMEM184CQ9NVA4 438 aa6.04□□□□□ -1.44
SMG1-201ENST00000330588 C14orf105Q9NVL8 296 aa6.04□□□□□ -1.44
SMG1-201ENST00000330588 TRMT1Q9NXH9 659 aaKnown RBP6.04□□□□□ -1.44
SMG1-201ENST00000330588 WHRNQ9P202 907 aa6.04□□□□□ -1.44
SMG1-201ENST00000330588 TRMT6Q9UJA5 497 aaKnown RBP6.04□□□□□ -1.44
SMG1-201ENST00000330588 TP53TG5Q9Y2B4 290 aa6.04□□□□□ -1.44
SMG1-201ENST00000330588 ZZEF1O43149 2961 aa6.04□□□□□ -1.44
SMG1-201ENST00000330588 ZFHX4Q86UP3 3567 aa6.03□□□□□ -1.44
SMG1-201ENST00000330588 ASPMQ8IZT6 3477 aa6.03□□□□□ -1.44
SMG1-201ENST00000330588 CCDC189A1A4V9 331 aa6.03□□□□□ -1.44
SMG1-201ENST00000330588 CLEC18AA5D8T8 446 aa6.03□□□□□ -1.44
SMG1-201ENST00000330588 USP27XA6NNY8 438 aa6.03□□□□□ -1.44
SMG1-201ENST00000330588 GOLGA8KD6RF30 607 aa6.03□□□□□ -1.44
SMG1-201ENST00000330588 GOLGA8TH3BQL2 631 aa6.03□□□□□ -1.44
SMG1-201ENST00000330588 GOLGA8MH3BSY2 632 aa6.03□□□□□ -1.44
SMG1-201ENST00000330588 AGPSO00116 658 aa6.03□□□□□ -1.44
SMG1-201ENST00000330588 PEX12O00623 359 aa6.03□□□□□ -1.44
SMG1-201ENST00000330588 HCRTR1O43613 425 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms