RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 RAG2P55895 527 aa8.11□□□□□ -1.11
SKA2-201ENST00000330137 OSTNP61366 133 aa8.11□□□□□ -1.11
SKA2-201ENST00000330137 DAB2P98082 770 aa8.11□□□□□ -1.11
SKA2-201ENST00000330137 IL1RL1Q01638 556 aa8.11□□□□□ -1.11
SKA2-201ENST00000330137 PCBP2Q15366 365 aaKnown RBP eCLIP8.11□□□□□ -1.113e-12■■■■■ 44.1
SKA2-201ENST00000330137 RBBP7Q16576 425 aa8.11□□□□□ -1.11
SKA2-201ENST00000330137 AP5B1Q2VPB7 878 aa8.11□□□□□ -1.11
SKA2-201ENST00000330137 SOWAHCQ53LP3 525 aaPredicted RBP8.11□□□□□ -1.11
SKA2-201ENST00000330137 FAM72AQ5TYM5 149 aa8.11□□□□□ -1.11
SKA2-201ENST00000330137 FAM72DQ6L9T8 149 aa8.11□□□□□ -1.11
SKA2-201ENST00000330137 KLHL17Q6TDP4 642 aa8.11□□□□□ -1.11
SKA2-201ENST00000330137 FAM92BQ6ZTR7 304 aa8.11□□□□□ -1.11
SKA2-201ENST00000330137 PLPPR4Q7Z2D5 763 aa8.11□□□□□ -1.11
SKA2-201ENST00000330137 SAMD7Q7Z3H4 446 aa8.11□□□□□ -1.11
SKA2-201ENST00000330137 FAM72BQ86X60 149 aa8.11□□□□□ -1.11
SKA2-201ENST00000330137 CAMKK1Q8N5S9 505 aa8.11□□□□□ -1.11
SKA2-201ENST00000330137 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.11□□□□□ -1.11
SKA2-201ENST00000330137 SRFBP1Q8NEF9 429 aaKnown RBP8.11□□□□□ -1.11
SKA2-201ENST00000330137 OR4A15Q8NGL6 344 aa8.11□□□□□ -1.11
SKA2-201ENST00000330137 SPATA22Q8NHS9 363 aa8.11□□□□□ -1.11
SKA2-201ENST00000330137 TMEM163Q8TC26 289 aa8.11□□□□□ -1.11
SKA2-201ENST00000330137 DACT3Q96B18 629 aaPredicted RBP8.11□□□□□ -1.11
SKA2-201ENST00000330137 FAM149B1Q96BN6 582 aa8.11□□□□□ -1.11
SKA2-201ENST00000330137 BARD1Q99728 777 aaKnown RBP8.11□□□□□ -1.11
SKA2-201ENST00000330137 MAPKAP1Q9BPZ7 522 aa8.11□□□□□ -1.11
SKA2-201ENST00000330137 TMEM43Q9BTV4 400 aa8.11□□□□□ -1.11
SKA2-201ENST00000330137 CNPPD1Q9BV87 410 aa8.11□□□□□ -1.11
SKA2-201ENST00000330137 DUSP16Q9BY84 665 aa8.11□□□□□ -1.11
SKA2-201ENST00000330137 CD244Q9BZW8 370 aa8.11□□□□□ -1.11
SKA2-201ENST00000330137 DPY30Q9C005 99 aa8.11□□□□□ -1.11
SKA2-201ENST00000330137 PPP1R3EQ9H7J1 279 aa8.11□□□□□ -1.11
SKA2-201ENST00000330137 CCSER2Q9H7U1 834 aa8.11□□□□□ -1.11
SKA2-201ENST00000330137 HHATLQ9HCP6 504 aa8.11□□□□□ -1.11
SKA2-201ENST00000330137 FZD3Q9NPG1 666 aa8.11□□□□□ -1.11
SKA2-201ENST00000330137 ISYNA1Q9NPH2 558 aa8.11□□□□□ -1.11
SKA2-201ENST00000330137 TAS2R13Q9NYV9 303 aa8.11□□□□□ -1.11
SKA2-201ENST00000330137 AASSQ9UDR5 926 aa8.11□□□□□ -1.11
SKA2-201ENST00000330137 MGAT4AQ9UM21 535 aa8.11□□□□□ -1.11
SKA2-201ENST00000330137 LIPT1Q9Y234 373 aa8.11□□□□□ -1.11
SKA2-201ENST00000330137 LSM2Q9Y333 95 aaKnown RBP8.11□□□□□ -1.11
SKA2-201ENST00000330137 PCDHGA2Q9Y5H1 932 aa8.11□□□□□ -1.11
SKA2-201ENST00000330137 HRH3Q9Y5N1 445 aa8.11□□□□□ -1.11
SKA2-201ENST00000330137 PLXNA1Q9UIW2 1896 aa8.11□□□□□ -1.11
SKA2-201ENST00000330137 ZNF638Q14966 1978 aaKnown RBP8.11□□□□□ -1.11
SKA2-201ENST00000330137 ARRDC5A6NEK1 342 aa8.1□□□□□ -1.11
SKA2-201ENST00000330137 A8MX80 341 aa8.1□□□□□ -1.11
SKA2-201ENST00000330137 H3BUI4 141 aa8.1□□□□□ -1.11
SKA2-201ENST00000330137 E2F3O00716 465 aa8.1□□□□□ -1.11
SKA2-201ENST00000330137 CHP2O43745 196 aa8.1□□□□□ -1.11
SKA2-201ENST00000330137 ECI2O75521 394 aa8.1□□□□□ -1.11
SKA2-201ENST00000330137 GLP2RO95838 553 aa8.1□□□□□ -1.11
SKA2-201ENST00000330137 MT-CYBP00156 380 aaPredicted RBP8.1□□□□□ -1.11
SKA2-201ENST00000330137 DHFRP00374 187 aa8.1□□□□□ -1.11
SKA2-201ENST00000330137 TRIM23P36406 574 aa8.1□□□□□ -1.11
SKA2-201ENST00000330137 NUP62P37198 522 aaPredicted RBP8.1□□□□□ -1.11
SKA2-201ENST00000330137 CCT3P49368 545 aaKnown RBP8.1□□□□□ -1.11
SKA2-201ENST00000330137 CXCR3P49682 368 aa8.1□□□□□ -1.11
SKA2-201ENST00000330137 CDC42P60953 191 aa8.1□□□□□ -1.11
SKA2-201ENST00000330137 ERVK-21P61565 698 aa8.1□□□□□ -1.11
SKA2-201ENST00000330137 KLHL22Q53GT1 634 aa8.1□□□□□ -1.11
SKA2-201ENST00000330137 GCNT7Q6ZNI0 430 aa8.1□□□□□ -1.11
SKA2-201ENST00000330137 ARMCX2Q7L311 632 aa8.1□□□□□ -1.11
SKA2-201ENST00000330137 FAM83AQ86UY5 434 aa8.1□□□□□ -1.11
SKA2-201ENST00000330137 NLRP8Q86W28 1048 aa8.1□□□□□ -1.11
SKA2-201ENST00000330137 TMEM192Q8IY95 271 aa8.1□□□□□ -1.11
SKA2-201ENST00000330137 EIF4E3Q8N5X7 224 aaKnown RBP8.1□□□□□ -1.11
SKA2-201ENST00000330137 TRPM4Q8TD43 1214 aa8.1□□□□□ -1.11
SKA2-201ENST00000330137 UCN3Q969E3 161 aa8.1□□□□□ -1.11
SKA2-201ENST00000330137 FBXW5Q969U6 566 aa8.1□□□□□ -1.11
SKA2-201ENST00000330137 FUBP1Q96AE4 644 aaKnown RBP8.1□□□□□ -1.11
SKA2-201ENST00000330137 MND1Q9BWT6 205 aa8.1□□□□□ -1.11
SKA2-201ENST00000330137 IKZF5Q9H5V7 419 aa8.1□□□□□ -1.11
SKA2-201ENST00000330137 ABCB9Q9NP78 766 aa8.1□□□□□ -1.11
SKA2-201ENST00000330137 ZFP64Q9NPA5 681 aa8.1□□□□□ -1.11
SKA2-201ENST00000330137 GPR83Q9NYM4 423 aa8.1□□□□□ -1.11
SKA2-201ENST00000330137 ZNF226Q9NYT6 803 aa8.1□□□□□ -1.11
SKA2-201ENST00000330137 MARK1Q9P0L2 795 aa8.1□□□□□ -1.11
SKA2-201ENST00000330137 NCKAP1Q9Y2A7 1128 aa8.1□□□□□ -1.11
SKA2-201ENST00000330137 KCNK7Q9Y2U2 307 aa8.1□□□□□ -1.11
SKA2-201ENST00000330137 A0A1W2PQL4 384 aaPredicted RBP8.1□□□□□ -1.11
SKA2-201ENST00000330137 PRSS44E7EML9 344 aa8.1□□□□□ -1.11
SKA2-201ENST00000330137 DFFAO00273 331 aa8.1□□□□□ -1.11
SKA2-201ENST00000330137 PCDH17O14917 1159 aa8.1□□□□□ -1.11
SKA2-201ENST00000330137 MAFKO60675 156 aa8.1□□□□□ -1.11
SKA2-201ENST00000330137 STOMP27105 288 aa8.1□□□□□ -1.11
SKA2-201ENST00000330137 EPHA2P29317 976 aa8.1□□□□□ -1.11
SKA2-201ENST00000330137 PPP1R8Q12972 351 aaKnown RBP8.1□□□□□ -1.11
SKA2-201ENST00000330137 EXOSC2Q13868 293 aaKnown RBP8.1□□□□□ -1.11
SKA2-201ENST00000330137 NR6A1Q15406 480 aa8.1□□□□□ -1.11
SKA2-201ENST00000330137 MED22Q15528 200 aa8.1□□□□□ -1.11
SKA2-201ENST00000330137 SYPL2Q5VXT5 272 aa8.1□□□□□ -1.11
SKA2-201ENST00000330137 RTL4Q6ZR62 310 aa8.1□□□□□ -1.11
SKA2-201ENST00000330137 PHC2Q8IXK0 858 aa8.1□□□□□ -1.11
SKA2-201ENST00000330137 PGBD5Q8N414 524 aa8.1□□□□□ -1.11
SKA2-201ENST00000330137 DTX3Q8N9I9 347 aa8.1□□□□□ -1.11
SKA2-201ENST00000330137 UXS1Q8NBZ7 420 aa8.1□□□□□ -1.11
SKA2-201ENST00000330137 ZBTB44Q8NCP5 570 aa8.1□□□□□ -1.11
SKA2-201ENST00000330137 VPS37AQ8NEZ2 397 aa8.1□□□□□ -1.11
SKA2-201ENST00000330137 PROKR2Q8NFJ6 384 aa8.1□□□□□ -1.11
SKA2-201ENST00000330137 B3GNT7Q8NFL0 401 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms