RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 ADPRHL2Q9NX46 363 aa14.83□□□□□ -0.04
BRCC3-201ENST00000330045 GIN1Q9NXP7 522 aa14.83□□□□□ -0.04
BRCC3-201ENST00000330045 CLDN24A6NM45 220 aa14.82□□□□□ -0.04
BRCC3-201ENST00000330045 GABRR3A8MPY1 467 aa14.82□□□□□ -0.04
BRCC3-201ENST00000330045 E7EQ34 232 aa14.82□□□□□ -0.04
BRCC3-201ENST00000330045 E9PQ18 207 aa14.82□□□□□ -0.04
BRCC3-201ENST00000330045 SCAMP2O15127 329 aaKnown RBP14.82□□□□□ -0.04
BRCC3-201ENST00000330045 SUV39H1O43463 412 aa14.82□□□□□ -0.04
BRCC3-201ENST00000330045 TGFBR2P37173 567 aa14.82□□□□□ -0.04
BRCC3-201ENST00000330045 CRYBA2P53672 197 aa14.82□□□□□ -0.04
BRCC3-201ENST00000330045 DPY19L3Q6ZPD9 716 aa14.82□□□□□ -0.04
BRCC3-201ENST00000330045 P3H2Q8IVL5 708 aa14.82□□□□□ -0.04
BRCC3-201ENST00000330045 ASZ1Q8WWH4 475 aa14.82□□□□□ -0.04
BRCC3-201ENST00000330045 SLIRPQ9GZT3 109 aaKnown RBP14.82□□□□□ -0.04
BRCC3-201ENST00000330045 INIPQ9NRY2 104 aa14.82□□□□□ -0.04
BRCC3-201ENST00000330045 VPS4AQ9UN37 437 aa14.82□□□□□ -0.04
BRCC3-201ENST00000330045 HS3ST2Q9Y278 367 aa14.82□□□□□ -0.04
BRCC3-201ENST00000330045 PCDHGB3Q9Y5G1 929 aa14.82□□□□□ -0.04
BRCC3-201ENST00000330045 PCDHGA6Q9Y5G7 932 aa14.82□□□□□ -0.04
BRCC3-201ENST00000330045 TMEM221A6NGB7 291 aa14.82□□□□□ -0.04
BRCC3-201ENST00000330045 POP4O95707 220 aaKnown RBP14.82□□□□□ -0.04
BRCC3-201ENST00000330045 ALOX5P09917 674 aa14.82□□□□□ -0.04
BRCC3-201ENST00000330045 RRM2P31350 389 aa14.82□□□□□ -0.04
BRCC3-201ENST00000330045 MAGEA8P43361 318 aa14.82□□□□□ -0.04
BRCC3-201ENST00000330045 CPTPQ5TA50 214 aa14.82□□□□□ -0.04
BRCC3-201ENST00000330045 UBE2UQ5VVX9 321 aa14.82□□□□□ -0.04
BRCC3-201ENST00000330045 PAGE2Q7Z2X7 111 aa14.82□□□□□ -0.04
BRCC3-201ENST00000330045 HS6ST3Q8IZP7 471 aa14.82□□□□□ -0.04
BRCC3-201ENST00000330045 CMTM8Q8IZV2 173 aa14.82□□□□□ -0.04
BRCC3-201ENST00000330045 VPS37AQ8NEZ2 397 aa14.82□□□□□ -0.04
BRCC3-201ENST00000330045 MRPS31Q92665 395 aaKnown RBP14.82□□□□□ -0.04
BRCC3-201ENST00000330045 DNASE1L2Q92874 299 aa14.82□□□□□ -0.04
BRCC3-201ENST00000330045 ZHX1-C8orf76Q96EF9 292 aa14.82□□□□□ -0.04
BRCC3-201ENST00000330045 C11orf24Q96F05 449 aaPredicted RBP14.82□□□□□ -0.04
BRCC3-201ENST00000330045 GABARAPL3Q9BY60 117 aa14.82□□□□□ -0.04
BRCC3-201ENST00000330045 CHST8Q9H2A9 424 aa14.82□□□□□ -0.04
BRCC3-201ENST00000330045 FAM8A1Q9UBU6 413 aa14.82□□□□□ -0.04
BRCC3-201ENST00000330045 BTNL2Q9UIR0 455 aa14.82□□□□□ -0.04
BRCC3-201ENST00000330045 PNMA8BQ9ULN7 279 aaPredicted RBP14.82□□□□□ -0.04
BRCC3-201ENST00000330045 C1orf226A1L170 272 aa14.81□□□□□ -0.04
BRCC3-201ENST00000330045 TTC34A8MYJ7 566 aa14.81□□□□□ -0.04
BRCC3-201ENST00000330045 EFCAB9A8MZ26 197 aa14.81□□□□□ -0.04
BRCC3-201ENST00000330045 TGM1P22735 817 aa14.81□□□□□ -0.04
BRCC3-201ENST00000330045 PPIBP23284 216 aaKnown RBP14.81□□□□□ -0.04
BRCC3-201ENST00000330045 AQP1P29972 269 aa14.81□□□□□ -0.04
BRCC3-201ENST00000330045 TGFBR1P36897 503 aa14.81□□□□□ -0.04
BRCC3-201ENST00000330045 RPS3AP61247 264 aaKnown RBP14.81□□□□□ -0.04
BRCC3-201ENST00000330045 RGNQ15493 299 aa14.81□□□□□ -0.04
BRCC3-201ENST00000330045 GPR153Q6NV75 609 aa14.81□□□□□ -0.04
BRCC3-201ENST00000330045 GAREM2Q75VX8 874 aa14.81□□□□□ -0.04
BRCC3-201ENST00000330045 CLP1Q92989 425 aaKnown RBP14.81□□□□□ -0.04
BRCC3-201ENST00000330045 SLC38A4Q969I6 547 aa14.81□□□□□ -0.04
BRCC3-201ENST00000330045 MAL2Q969L2 176 aa14.81□□□□□ -0.04
BRCC3-201ENST00000330045 EMILIN2Q9BXX0 1053 aa14.81□□□□□ -0.04
BRCC3-201ENST00000330045 ITPAQ9BY32 194 aa14.81□□□□□ -0.04
BRCC3-201ENST00000330045 PRM3Q9NNZ6 103 aa14.81□□□□□ -0.04
BRCC3-201ENST00000330045 OSGIN1Q9UJX0 560 aa14.81□□□□□ -0.04
BRCC3-201ENST00000330045 CORO2BQ9UQ03 480 aa14.81□□□□□ -0.04
BRCC3-201ENST00000330045 RNF6Q9Y252 685 aa14.81□□□□□ -0.04
BRCC3-201ENST00000330045 H0YIV9 168 aa14.81□□□□□ -0.04
BRCC3-201ENST00000330045 KIAA0355O15063 1070 aa14.81□□□□□ -0.04
BRCC3-201ENST00000330045 TEX28O15482 410 aa14.81□□□□□ -0.04
BRCC3-201ENST00000330045 NTRK1P04629 796 aa14.81□□□□□ -0.04
BRCC3-201ENST00000330045 GSTM1P09488 218 aa14.81□□□□□ -0.04
BRCC3-201ENST00000330045 LINC00271P0C7V0 271 aa14.81□□□□□ -0.04
BRCC3-201ENST00000330045 EN2P19622 333 aaPredicted RBP14.81□□□□□ -0.04
BRCC3-201ENST00000330045 HLA-FP30511 346 aa14.81□□□□□ -0.04
BRCC3-201ENST00000330045 ASMTP46597 345 aa14.81□□□□□ -0.04
BRCC3-201ENST00000330045 RXRGP48443 463 aa14.81□□□□□ -0.04
BRCC3-201ENST00000330045 HKDC1Q2TB90 917 aa14.81□□□□□ -0.04
BRCC3-201ENST00000330045 GRHL2Q6ISB3 625 aa14.81□□□□□ -0.04
BRCC3-201ENST00000330045 RASGRP3Q8IV61 690 aa14.81□□□□□ -0.04
BRCC3-201ENST00000330045 C1orf52Q8N6N3 182 aaKnown RBP14.81□□□□□ -0.04
BRCC3-201ENST00000330045 SCAMP4Q969E2 229 aa14.81□□□□□ -0.04
BRCC3-201ENST00000330045 MED8Q96G25 268 aa14.81□□□□□ -0.04
BRCC3-201ENST00000330045 METTL2AQ96IZ6 378 aaKnown RBP14.81□□□□□ -0.04
BRCC3-201ENST00000330045 LMLNQ96KR4 655 aa14.81□□□□□ -0.04
BRCC3-201ENST00000330045 KCNC2Q96PR1 638 aa14.81□□□□□ -0.04
BRCC3-201ENST00000330045 COPS4Q9BT78 406 aa14.81□□□□□ -0.04
BRCC3-201ENST00000330045 DOHHQ9BU89 302 aa14.81□□□□□ -0.04
BRCC3-201ENST00000330045 SGK2Q9HBY8 427 aa14.81□□□□□ -0.04
BRCC3-201ENST00000330045 SPG21Q9NZD8 308 aa14.81□□□□□ -0.04
BRCC3-201ENST00000330045 PADI2Q9Y2J8 665 aa14.81□□□□□ -0.04
BRCC3-201ENST00000330045 ARHGEF33A8MVX0 844 aa14.8□□□□□ -0.04
BRCC3-201ENST00000330045 SGTAO43765 313 aa14.8□□□□□ -0.04
BRCC3-201ENST00000330045 SH3BGRLO75368 114 aa14.8□□□□□ -0.04
BRCC3-201ENST00000330045 SLCO2B1O94956 709 aa14.8□□□□□ -0.04
BRCC3-201ENST00000330045 ETHE1O95571 254 aa14.8□□□□□ -0.04
BRCC3-201ENST00000330045 VIPP01282 170 aa14.8□□□□□ -0.04
BRCC3-201ENST00000330045 ANXA4P09525 319 aaPredicted RBP14.8□□□□□ -0.04
BRCC3-201ENST00000330045 HSD3B1P14060 373 aa14.8□□□□□ -0.04
BRCC3-201ENST00000330045 HSD3B2P26439 372 aa14.8□□□□□ -0.04
BRCC3-201ENST00000330045 HNF4AP41235 474 aa14.8□□□□□ -0.04
BRCC3-201ENST00000330045 RAE1P78406 368 aaKnown RBP14.8□□□□□ -0.04
BRCC3-201ENST00000330045 NAE1Q13564 534 aa14.8□□□□□ -0.04
BRCC3-201ENST00000330045 DNASE1L3Q13609 305 aa14.8□□□□□ -0.04
BRCC3-201ENST00000330045 SYT16Q17RD7 645 aa14.8□□□□□ -0.04
BRCC3-201ENST00000330045 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.8□□□□□ -0.04
BRCC3-201ENST00000330045 ANXA8L1Q5VT79 327 aa14.8□□□□□ -0.04
BRCC3-201ENST00000330045 FAM124AQ86V42 546 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms