RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 SPIN4Q56A73 249 aa9.47□□□□□ -0.89
COL12A1-201ENST00000322507 MCEMP1Q8IX19 187 aa9.47□□□□□ -0.89
COL12A1-201ENST00000322507 METTL21AQ8WXB1 218 aa9.47□□□□□ -0.89
COL12A1-201ENST00000322507 HDAC10Q969S8 669 aa9.47□□□□□ -0.89
COL12A1-201ENST00000322507 TM9SF2Q99805 663 aa9.47□□□□□ -0.89
COL12A1-201ENST00000322507 GON7Q9BXV9 100 aa9.47□□□□□ -0.89
COL12A1-201ENST00000322507 SLC38A1Q9H2H9 487 aa9.47□□□□□ -0.89
COL12A1-201ENST00000322507 MFSD1Q9H3U5 465 aa9.47□□□□□ -0.89
COL12A1-201ENST00000322507 PHF24Q9UPV7 400 aa9.47□□□□□ -0.89
COL12A1-201ENST00000322507 USP20Q9Y2K6 914 aa9.47□□□□□ -0.89
COL12A1-201ENST00000322507 RGPD8O14715 1765 aaPredicted RBP9.47□□□□□ -0.89
COL12A1-201ENST00000322507 PEX11AO75192 247 aa9.47□□□□□ -0.89
COL12A1-201ENST00000322507 PRAMEF12O95522 483 aa9.47□□□□□ -0.89
COL12A1-201ENST00000322507 MT-CO1P00395 513 aa9.47□□□□□ -0.89
COL12A1-201ENST00000322507 C8BP07358 591 aa9.47□□□□□ -0.89
COL12A1-201ENST00000322507 SMIM10L2AP0DMW4 78 aa9.47□□□□□ -0.89
COL12A1-201ENST00000322507 SMIM10L2BP0DMW5 78 aa9.47□□□□□ -0.89
COL12A1-201ENST00000322507 ANXA8P13928 327 aa9.47□□□□□ -0.89
COL12A1-201ENST00000322507 UBAP2LQ14157 1087 aaKnown RBP9.47□□□□□ -0.89
COL12A1-201ENST00000322507 DSC3Q14574 896 aa9.47□□□□□ -0.89
COL12A1-201ENST00000322507 CDK10Q15131 360 aa9.47□□□□□ -0.89
COL12A1-201ENST00000322507 IQCKQ8N0W5 287 aa9.47□□□□□ -0.89
COL12A1-201ENST00000322507 PIAS4Q8N2W9 510 aaPredicted RBP9.47□□□□□ -0.89
COL12A1-201ENST00000322507 ZBTB2Q8N680 514 aa9.47□□□□□ -0.89
COL12A1-201ENST00000322507 AZIN2Q96A70 460 aa9.47□□□□□ -0.89
COL12A1-201ENST00000322507 CDKN2AIPNLQ96HQ2 116 aa9.47□□□□□ -0.89
COL12A1-201ENST00000322507 ESRP2Q9H6T0 727 aaKnown RBP9.47□□□□□ -0.89
COL12A1-201ENST00000322507 FBXO6Q9NRD1 293 aaPredicted RBP9.47□□□□□ -0.89
COL12A1-201ENST00000322507 PGAM2P15259 253 aa9.47□□□□□ -0.89
COL12A1-201ENST00000322507 ITPKAP23677 461 aa9.47□□□□□ -0.89
COL12A1-201ENST00000322507 CYCSP99999 105 aaKnown RBP9.47□□□□□ -0.89
COL12A1-201ENST00000322507 TUSC3Q13454 348 aa9.47□□□□□ -0.89
COL12A1-201ENST00000322507 SLC9B1Q4ZJI4 515 aa9.47□□□□□ -0.89
COL12A1-201ENST00000322507 DNAJC19Q96DA6 116 aa9.47□□□□□ -0.89
COL12A1-201ENST00000322507 TMEM185BQ9H7F4 350 aa9.47□□□□□ -0.89
COL12A1-201ENST00000322507 NID2Q14112 1375 aa9.47□□□□□ -0.89
COL12A1-201ENST00000322507 APOA2P02652 100 aa9.47□□□□□ -0.89
COL12A1-201ENST00000322507 FAM163BP0C2L3 166 aa9.47□□□□□ -0.89
COL12A1-201ENST00000322507 LINGO3P0C6S8 592 aa9.47□□□□□ -0.89
COL12A1-201ENST00000322507 ZC3H12AQ5D1E8 599 aaKnown RBP9.47□□□□□ -0.89
COL12A1-201ENST00000322507 CXorf57Q6NSI4 855 aaKnown RBP9.47□□□□□ -0.89
COL12A1-201ENST00000322507 NIPA2Q8N8Q9 360 aa9.47□□□□□ -0.89
COL12A1-201ENST00000322507 ZNF596Q8TC21 504 aa9.47□□□□□ -0.89
COL12A1-201ENST00000322507 SCRN2Q96FV2 425 aa9.47□□□□□ -0.89
COL12A1-201ENST00000322507 PIWIL1Q96J94 861 aaKnown RBP9.47□□□□□ -0.89
COL12A1-201ENST00000322507 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.46□□□□□ -0.89
COL12A1-201ENST00000322507 CAPN14A8MX76 684 aa9.46□□□□□ -0.89
COL12A1-201ENST00000322507 NPC1O15118 1278 aa9.46□□□□□ -0.89
COL12A1-201ENST00000322507 OR3A3P47888 321 aa9.46□□□□□ -0.89
COL12A1-201ENST00000322507 OR3A2P47893 321 aa9.46□□□□□ -0.89
COL12A1-201ENST00000322507 GLO1Q04760 184 aa9.46□□□□□ -0.89
COL12A1-201ENST00000322507 SLIT2O94813 1529 aa9.46□□□□□ -0.89
COL12A1-201ENST00000322507 A0A1B0GVM2 712 aa9.46□□□□□ -0.89
COL12A1-201ENST00000322507 TCAF2A6NFQ2 919 aa9.46□□□□□ -0.89
COL12A1-201ENST00000322507 EPHA3P29320 983 aa9.46□□□□□ -0.89
COL12A1-201ENST00000322507 WNT3AP56704 352 aa9.46□□□□□ -0.89
COL12A1-201ENST00000322507 BAMBIQ13145 260 aa9.46□□□□□ -0.89
COL12A1-201ENST00000322507 TRAM1Q15629 374 aa9.46□□□□□ -0.89
COL12A1-201ENST00000322507 INAVAQ3KP66 663 aa9.46□□□□□ -0.89
COL12A1-201ENST00000322507 ZNF619Q8N2I2 560 aa9.46□□□□□ -0.89
COL12A1-201ENST00000322507 TSEN2Q8NCE0 465 aaKnown RBP9.46□□□□□ -0.89
COL12A1-201ENST00000322507 RAB39BQ96DA2 213 aa9.46□□□□□ -0.89
COL12A1-201ENST00000322507 ZNF486Q96H40 463 aaPredicted RBP9.46□□□□□ -0.89
COL12A1-201ENST00000322507 CMAHPQ9Y471 501 aa9.46□□□□□ -0.89
COL12A1-201ENST00000322507 ABCC6O95255 1503 aa9.46□□□□□ -0.89
COL12A1-201ENST00000322507 NUP214P35658 2090 aaPredicted RBP9.46□□□□□ -0.89
COL12A1-201ENST00000322507 RIMBP3CA6NJZ7 1639 aa9.46□□□□□ -0.89
COL12A1-201ENST00000322507 RIMBP3BA6NNM3 1639 aa9.46□□□□□ -0.89
COL12A1-201ENST00000322507 RIMBP3Q9UFD9 1639 aa9.46□□□□□ -0.89
COL12A1-201ENST00000322507 CREBL2O60519 120 aaPredicted RBP9.46□□□□□ -0.89
COL12A1-201ENST00000322507 LAG3P18627 525 aa9.46□□□□□ -0.89
COL12A1-201ENST00000322507 MED27Q6P2C8 311 aa9.46□□□□□ -0.89
COL12A1-201ENST00000322507 RNF148Q8N7C7 305 aa9.46□□□□□ -0.89
COL12A1-201ENST00000322507 LRRC4CQ9HCJ2 640 aa9.46□□□□□ -0.89
COL12A1-201ENST00000322507 XRN1Q8IZH2 1706 aaKnown RBP9.46□□□□□ -0.89
COL12A1-201ENST00000322507 IL1BP01584 269 aa9.46□□□□□ -0.89
COL12A1-201ENST00000322507 IDSP22304 550 aa9.46□□□□□ -0.89
COL12A1-201ENST00000322507 DPY19L4Q7Z388 723 aa9.46□□□□□ -0.89
COL12A1-201ENST00000322507 C1orf52Q8N6N3 182 aaKnown RBP9.46□□□□□ -0.89
COL12A1-201ENST00000322507 HAPLN3Q96S86 360 aa9.46□□□□□ -0.89
COL12A1-201ENST00000322507 TPK1Q9H3S4 243 aa9.46□□□□□ -0.89
COL12A1-201ENST00000322507 PCDHB9Q9Y5E1 797 aa9.46□□□□□ -0.89
COL12A1-201ENST00000322507 KDELC1Q6UW63 502 aa9.46□□□□□ -0.89
COL12A1-201ENST00000322507 DENND1CQ8IV53 801 aa9.46□□□□□ -0.89
COL12A1-201ENST00000322507 WDR81Q562E7 1941 aa9.46□□□□□ -0.89
COL12A1-201ENST00000322507 SCNN1GP51170 649 aa9.46□□□□□ -0.9
COL12A1-201ENST00000322507 ZNF792Q3KQV3 632 aa9.46□□□□□ -0.9
COL12A1-201ENST00000322507 DOK6Q6PKX4 331 aa9.46□□□□□ -0.9
COL12A1-201ENST00000322507 FANK1Q8TC84 345 aa9.46□□□□□ -0.9
COL12A1-201ENST00000322507 ZNF490Q9ULM2 529 aaPredicted RBP9.46□□□□□ -0.9
COL12A1-201ENST00000322507 TNFRSF11BO00300 401 aa9.46□□□□□ -0.9
COL12A1-201ENST00000322507 ACTA2P62736 377 aa9.46□□□□□ -0.9
COL12A1-201ENST00000322507 ACTG2P63267 376 aa9.46□□□□□ -0.9
COL12A1-201ENST00000322507 ACTC1P68032 377 aa9.46□□□□□ -0.9
COL12A1-201ENST00000322507 ACTA1P68133 377 aa9.46□□□□□ -0.9
COL12A1-201ENST00000322507 TLE1Q04724 770 aa9.46□□□□□ -0.9
COL12A1-201ENST00000322507 ZNF155Q12901 538 aaPredicted RBP9.46□□□□□ -0.9
COL12A1-201ENST00000322507 TEX261Q6UWH6 196 aa9.46□□□□□ -0.9
COL12A1-201ENST00000322507 ZNF367Q7RTV3 350 aa9.46□□□□□ -0.9
COL12A1-201ENST00000322507 SYVN1Q86TM6 617 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms