RNA–Protein interactions for RNA: ENST00000320857.7

SSR4-201, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSR4, Length 1,671 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-201ENST00000320857 RAB11FIP5Q9BXF6 653 aa16.34■□□□□ 0.21
SSR4-201ENST00000320857 PITHD1Q9GZP4 211 aaPredicted RBP16.34■□□□□ 0.21
SSR4-201ENST00000320857 SPNS1Q9H2V7 528 aa16.34■□□□□ 0.21
SSR4-201ENST00000320857 WASH6PQ9NQA3 447 aa16.34■□□□□ 0.21
SSR4-201ENST00000320857 AHSPQ9NZD4 102 aa16.34■□□□□ 0.21
SSR4-201ENST00000320857 ATP6V1HQ9UI12 483 aa16.34■□□□□ 0.21
SSR4-201ENST00000320857 GPSM3Q9Y4H4 160 aa16.34■□□□□ 0.21
SSR4-201ENST00000320857 C7orf72A4D263 438 aa16.33■□□□□ 0.2
SSR4-201ENST00000320857 FAM149AA5PLN7 773 aa16.33■□□□□ 0.2
SSR4-201ENST00000320857 GABRR3A8MPY1 467 aa16.33■□□□□ 0.2
SSR4-201ENST00000320857 CPSF4O95639 269 aaKnown RBP16.33■□□□□ 0.2
SSR4-201ENST00000320857 FUCA1P04066 466 aa16.33■□□□□ 0.2
SSR4-201ENST00000320857 RETP07949 1114 aa16.33■□□□□ 0.2
SSR4-201ENST00000320857 GLULP15104 373 aa16.33■□□□□ 0.2
SSR4-201ENST00000320857 CCR8P51685 355 aa16.33■□□□□ 0.2
SSR4-201ENST00000320857 CTBSQ01459 385 aa16.33■□□□□ 0.2
SSR4-201ENST00000320857 RBBP5Q15291 538 aaKnown RBP16.33■□□□□ 0.2
SSR4-201ENST00000320857 UGT2A3Q6UWM9 527 aa16.33■□□□□ 0.2
SSR4-201ENST00000320857 ARMCX6Q7L4S7 300 aa16.33■□□□□ 0.2
SSR4-201ENST00000320857 R3HCC1LQ7Z5L2 792 aaKnown RBP16.33■□□□□ 0.2
SSR4-201ENST00000320857 SERPINA11Q86U17 422 aa16.33■□□□□ 0.2
SSR4-201ENST00000320857 ST13P4Q8IZP2 240 aaPredicted RBP16.33■□□□□ 0.2
SSR4-201ENST00000320857 NCLNQ969V3 563 aa16.33■□□□□ 0.2
SSR4-201ENST00000320857 MENTQ9BUN1 341 aa16.33■□□□□ 0.2
SSR4-201ENST00000320857 ACAT2Q9BWD1 397 aa16.33■□□□□ 0.2
SSR4-201ENST00000320857 RHBGQ9H310 441 aa16.33■□□□□ 0.2
SSR4-201ENST00000320857 OR51B5Q9H339 312 aa16.33■□□□□ 0.2
SSR4-201ENST00000320857 REEP4Q9H6H4 257 aa16.33■□□□□ 0.2
SSR4-201ENST00000320857 SUFUQ9UMX1 484 aa16.33■□□□□ 0.2
SSR4-201ENST00000320857 KCNK6Q9Y257 313 aa16.33■□□□□ 0.2
SSR4-201ENST00000320857 WDR37Q9Y2I8 494 aa16.33■□□□□ 0.2
SSR4-201ENST00000320857 V9GYQ6 96 aa16.33■□□□□ 0.2
SSR4-201ENST00000320857 SLC31A1O15431 190 aa16.32■□□□□ 0.2
SSR4-201ENST00000320857 B3GALT4O96024 378 aa16.32■□□□□ 0.2
SSR4-201ENST00000320857 ZCCHC18P0CG32 403 aa16.32■□□□□ 0.2
SSR4-201ENST00000320857 ENGP17813 658 aa16.32■□□□□ 0.2
SSR4-201ENST00000320857 PPIBP23284 216 aaKnown RBP16.32■□□□□ 0.2
SSR4-201ENST00000320857 KIAA1024LP59773 190 aa16.32■□□□□ 0.2
SSR4-201ENST00000320857 PPP2CBP62714 309 aa16.32■□□□□ 0.2
SSR4-201ENST00000320857 PPP2CAP67775 309 aa16.32■□□□□ 0.2
SSR4-201ENST00000320857 KRT33BQ14525 404 aa16.32■□□□□ 0.2
SSR4-201ENST00000320857 DUS1LQ6P1R4 473 aaKnown RBP16.32■□□□□ 0.2
SSR4-201ENST00000320857 ZNF621Q6ZSS3 439 aa16.32■□□□□ 0.2
SSR4-201ENST00000320857 FKBP9P1Q75LS8 142 aa16.32■□□□□ 0.2
SSR4-201ENST00000320857 SPRED1Q7Z699 444 aa16.32■□□□□ 0.2
SSR4-201ENST00000320857 CBR4Q8N4T8 237 aa16.32■□□□□ 0.2
SSR4-201ENST00000320857 MFSD2AQ8NA29 543 aa16.32■□□□□ 0.2
SSR4-201ENST00000320857 DENND6BQ8NEG7 585 aa16.32■□□□□ 0.2
SSR4-201ENST00000320857 ABHD11Q8NFV4 315 aa16.32■□□□□ 0.2
SSR4-201ENST00000320857 SCARF2Q96GP6 870 aaPredicted RBP16.32■□□□□ 0.2
SSR4-201ENST00000320857 CNBD2Q96M20 576 aa16.32■□□□□ 0.2
SSR4-201ENST00000320857 CAMK1GQ96NX5 476 aa16.32■□□□□ 0.2
SSR4-201ENST00000320857 BHLHE41Q9C0J9 482 aaPredicted RBP16.32■□□□□ 0.2
SSR4-201ENST00000320857 MVB12BQ9H7P6 319 aa16.32■□□□□ 0.2
SSR4-201ENST00000320857 NT5DC2Q9H857 520 aa16.32■□□□□ 0.2
SSR4-201ENST00000320857 MYNNQ9NPC7 610 aa16.32■□□□□ 0.2
SSR4-201ENST00000320857 FZD3Q9NPG1 666 aa16.32■□□□□ 0.2
SSR4-201ENST00000320857 ATAD3AQ9NVI7 634 aa16.32■□□□□ 0.2
SSR4-201ENST00000320857 AK5Q9Y6K8 562 aa16.32■□□□□ 0.2
SSR4-201ENST00000320857 RNF103-CHMP3A0A140T963 221 aa16.31■□□□□ 0.2
SSR4-201ENST00000320857 DPPA5A6NC42 116 aa16.31■□□□□ 0.2
SSR4-201ENST00000320857 ANKDD1BA6NHY2 528 aa16.31■□□□□ 0.2
SSR4-201ENST00000320857 PRR19A6NJB7 356 aa16.31■□□□□ 0.2
SSR4-201ENST00000320857 CLIC1O00299 241 aa16.31■□□□□ 0.2
SSR4-201ENST00000320857 SOCS2O14508 198 aa16.31■□□□□ 0.2
SSR4-201ENST00000320857 CLOCKO15516 846 aa16.31■□□□□ 0.2
SSR4-201ENST00000320857 DEAF1O75398 565 aaPredicted RBP16.31■□□□□ 0.2
SSR4-201ENST00000320857 CREG1O75629 220 aa16.31■□□□□ 0.2
SSR4-201ENST00000320857 REEP5Q00765 189 aa16.31■□□□□ 0.2
SSR4-201ENST00000320857 FBXO43Q4G163 708 aa16.31■□□□□ 0.2
SSR4-201ENST00000320857 IER5LQ5T953 404 aa16.31■□□□□ 0.2
SSR4-201ENST00000320857 ANKRD26P1Q6NSI1 321 aa16.31■□□□□ 0.2
SSR4-201ENST00000320857 ERICH5Q6P6B1 374 aa16.31■□□□□ 0.2
SSR4-201ENST00000320857 KIAA1324Q6UXG2 1013 aaKnown RBP16.31■□□□□ 0.2
SSR4-201ENST00000320857 FAM124AQ86V42 546 aa16.31■□□□□ 0.2
SSR4-201ENST00000320857 ZNF740Q8NDX6 193 aa16.31■□□□□ 0.2
SSR4-201ENST00000320857 MSANTD3Q96H12 275 aa16.31■□□□□ 0.2
SSR4-201ENST00000320857 PHF12Q96QT6 1004 aa16.31■□□□□ 0.2
SSR4-201ENST00000320857 OLAHQ9NV23 265 aa16.31■□□□□ 0.2
SSR4-201ENST00000320857 IMP3Q9NV31 184 aaKnown RBP16.31■□□□□ 0.2
SSR4-201ENST00000320857 SH3BP4Q9P0V3 963 aa16.31■□□□□ 0.2
SSR4-201ENST00000320857 CORO2BQ9UQ03 480 aa16.31■□□□□ 0.2
SSR4-201ENST00000320857 PCDHB11Q9Y5F2 797 aa16.31■□□□□ 0.2
SSR4-201ENST00000320857 A0A1W2PPV9 198 aa16.3■□□□□ 0.2
SSR4-201ENST00000320857 ARHGAP10A1A4S6 786 aa16.3■□□□□ 0.2
SSR4-201ENST00000320857 PDZK1P1A8MUH7 402 aa16.3■□□□□ 0.2
SSR4-201ENST00000320857 SAP18O00422 153 aaKnown RBP16.3■□□□□ 0.2
SSR4-201ENST00000320857 RNASET2O00584 256 aaKnown RBP16.3■□□□□ 0.2
SSR4-201ENST00000320857 KDM1AO60341 852 aa16.3■□□□□ 0.2
SSR4-201ENST00000320857 SEMA3DO95025 777 aa16.3■□□□□ 0.2
SSR4-201ENST00000320857 RASAL1O95294 804 aa16.3■□□□□ 0.2
SSR4-201ENST00000320857 RAB28P51157 221 aa16.3■□□□□ 0.2
SSR4-201ENST00000320857 MLF2Q15773 248 aaPredicted RBP16.3■□□□□ 0.2
SSR4-201ENST00000320857 OR52E8Q6IFG1 317 aa16.3■□□□□ 0.2
SSR4-201ENST00000320857 VN1R5Q7Z5H4 357 aa16.3■□□□□ 0.2
SSR4-201ENST00000320857 EPHX4Q8IUS5 362 aa16.3■□□□□ 0.2
SSR4-201ENST00000320857 CLECL1Q8IZS7 167 aa16.3■□□□□ 0.2
SSR4-201ENST00000320857 WDR48Q8TAF3 677 aa16.3■□□□□ 0.2
SSR4-201ENST00000320857 FBXO30Q8TB52 745 aa16.3■□□□□ 0.2
SSR4-201ENST00000320857 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms