RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 SCTRP47872 440 aa14.72□□□□□ -0.05
PDLIM5-202ENST00000318007 ARFIP2P53365 341 aa14.72□□□□□ -0.05
PDLIM5-202ENST00000318007 PLA2G16P53816 162 aa14.72□□□□□ -0.05
PDLIM5-202ENST00000318007 FOXM1Q08050 763 aa14.72□□□□□ -0.05
PDLIM5-202ENST00000318007 LAPTM5Q13571 262 aa14.72□□□□□ -0.05
PDLIM5-202ENST00000318007 Q6ZSR9 355 aa14.72□□□□□ -0.05
PDLIM5-202ENST00000318007 MARCH9Q86YJ5 346 aa14.72□□□□□ -0.05
PDLIM5-202ENST00000318007 LAS2Q8IYD9 372 aa14.72□□□□□ -0.05
PDLIM5-202ENST00000318007 SLC13A3Q8WWT9 602 aa14.72□□□□□ -0.05
PDLIM5-202ENST00000318007 USP7Q93009 1102 aa14.72□□□□□ -0.05
PDLIM5-202ENST00000318007 RERGQ96A58 199 aaPredicted RBP14.72□□□□□ -0.05
PDLIM5-202ENST00000318007 ZUFSPQ96AP4 578 aa14.72□□□□□ -0.05
PDLIM5-202ENST00000318007 F2RL3Q96RI0 385 aa14.72□□□□□ -0.05
PDLIM5-202ENST00000318007 EBPLQ9BY08 206 aa14.72□□□□□ -0.05
PDLIM5-202ENST00000318007 EPB41L1Q9H4G0 881 aa14.72□□□□□ -0.05
PDLIM5-202ENST00000318007 KLHL31Q9H511 634 aa14.72□□□□□ -0.05
PDLIM5-202ENST00000318007 AKTIPQ9H8T0 292 aa14.72□□□□□ -0.05
PDLIM5-202ENST00000318007 PDE7BQ9NP56 450 aa14.72□□□□□ -0.05
PDLIM5-202ENST00000318007 DMRT3Q9NQL9 472 aa14.72□□□□□ -0.05
PDLIM5-202ENST00000318007 EPHA6Q9UF33 1036 aa14.72□□□□□ -0.05
PDLIM5-202ENST00000318007 COL5A1P20908 1838 aaPredicted RBP14.72□□□□□ -0.05
PDLIM5-202ENST00000318007 SPTBP11277 2137 aa14.72□□□□□ -0.05
PDLIM5-202ENST00000318007 H0YGG7 62 aa14.71□□□□□ -0.05
PDLIM5-202ENST00000318007 SDHDO14521 159 aa14.71□□□□□ -0.05
PDLIM5-202ENST00000318007 SNX3O60493 162 aa14.71□□□□□ -0.05
PDLIM5-202ENST00000318007 RFPL3O75679 317 aa14.71□□□□□ -0.05
PDLIM5-202ENST00000318007 TBX6O95947 436 aaPredicted RBP14.71□□□□□ -0.05
PDLIM5-202ENST00000318007 THRAP10827 490 aa14.71□□□□□ -0.05
PDLIM5-202ENST00000318007 HNRNPH1P31943 449 aaKnown RBP14.71□□□□□ -0.05
PDLIM5-202ENST00000318007 PDX1P52945 283 aa14.71□□□□□ -0.05
PDLIM5-202ENST00000318007 NME5P56597 212 aa14.71□□□□□ -0.05
PDLIM5-202ENST00000318007 RAB8AP61006 207 aa14.71□□□□□ -0.05
PDLIM5-202ENST00000318007 ARF3P61204 181 aaPredicted RBP14.71□□□□□ -0.05
PDLIM5-202ENST00000318007 RPL38P63173 70 aaKnown RBP14.71□□□□□ -0.05
PDLIM5-202ENST00000318007 SIM1P81133 766 aaPredicted RBP14.71□□□□□ -0.05
PDLIM5-202ENST00000318007 TUBB8Q3ZCM7 444 aa14.71□□□□□ -0.05
PDLIM5-202ENST00000318007 FOXR1Q6PIV2 292 aa14.71□□□□□ -0.05
PDLIM5-202ENST00000318007 EPGNQ6UW88 154 aa14.71□□□□□ -0.05
PDLIM5-202ENST00000318007 VN1R4Q7Z5H5 301 aa14.71□□□□□ -0.05
PDLIM5-202ENST00000318007 OR4D9Q8NGE8 314 aa14.71□□□□□ -0.05
PDLIM5-202ENST00000318007 REPS1Q96D71 796 aa14.71□□□□□ -0.05
PDLIM5-202ENST00000318007 APIPQ96GX9 242 aa14.71□□□□□ -0.05
PDLIM5-202ENST00000318007 OR2A5Q96R48 311 aa14.71□□□□□ -0.05
PDLIM5-202ENST00000318007 CDC6Q99741 560 aa14.71□□□□□ -0.05
PDLIM5-202ENST00000318007 RAB33BQ9H082 229 aa14.71□□□□□ -0.05
PDLIM5-202ENST00000318007 KLHL14Q9P2G3 628 aa14.71□□□□□ -0.05
PDLIM5-202ENST00000318007 VTI1BQ9UEU0 232 aa14.71□□□□□ -0.05
PDLIM5-202ENST00000318007 POLR3HQ9Y535 204 aaPredicted RBP14.71□□□□□ -0.05
PDLIM5-202ENST00000318007 TMEM150CB9EJG8 249 aa14.71□□□□□ -0.06
PDLIM5-202ENST00000318007 SNUPNO95149 360 aaKnown RBP14.71□□□□□ -0.06
PDLIM5-202ENST00000318007 TGDSO95455 350 aa14.71□□□□□ -0.06
PDLIM5-202ENST00000318007 HK2P52789 917 aa14.71□□□□□ -0.06
PDLIM5-202ENST00000318007 RPS15AP62244 130 aaKnown RBP14.71□□□□□ -0.06
PDLIM5-202ENST00000318007 HSD11B2P80365 405 aa14.71□□□□□ -0.06
PDLIM5-202ENST00000318007 E2F2Q14209 437 aa14.71□□□□□ -0.06
PDLIM5-202ENST00000318007 LSM12Q3MHD2 195 aaKnown RBP14.71□□□□□ -0.06
PDLIM5-202ENST00000318007 PIP4P1Q86T03 277 aa14.71□□□□□ -0.06
PDLIM5-202ENST00000318007 SLCO6A1Q86UG4 719 aa14.71□□□□□ -0.06
PDLIM5-202ENST00000318007 METTL27Q8N6F8 245 aaPredicted RBP14.71□□□□□ -0.06
PDLIM5-202ENST00000318007 FNDC5Q8NAU1 212 aa14.71□□□□□ -0.06
PDLIM5-202ENST00000318007 CDC26Q8NHZ8 85 aa14.71□□□□□ -0.06
PDLIM5-202ENST00000318007 C10orf82Q8WW14 230 aa14.71□□□□□ -0.06
PDLIM5-202ENST00000318007 TCTN2Q96GX1 697 aa14.71□□□□□ -0.06
PDLIM5-202ENST00000318007 FAR2Q96K12 515 aa14.71□□□□□ -0.06
PDLIM5-202ENST00000318007 C17orf62Q9BQA9 187 aa14.71□□□□□ -0.06
PDLIM5-202ENST00000318007 MEAF6Q9HAF1 191 aa14.71□□□□□ -0.06
PDLIM5-202ENST00000318007 TCF7L2Q9NQB0 619 aa14.71□□□□□ -0.06
PDLIM5-202ENST00000318007 ZFP69BQ9UJL9 534 aa14.71□□□□□ -0.06
PDLIM5-202ENST00000318007 PILRAQ9UKJ1 303 aa14.71□□□□□ -0.06
PDLIM5-202ENST00000318007 TRPC5OSA6NMA1 111 aa14.7□□□□□ -0.06
PDLIM5-202ENST00000318007 C4orf51C9J302 202 aa14.7□□□□□ -0.06
PDLIM5-202ENST00000318007 SLCO1B7G3V0H7 640 aa14.7□□□□□ -0.06
PDLIM5-202ENST00000318007 NTN3O00634 580 aaPredicted RBP14.7□□□□□ -0.06
PDLIM5-202ENST00000318007 ABCB7O75027 752 aa14.7□□□□□ -0.06
PDLIM5-202ENST00000318007 SEC22BO75396 215 aa14.7□□□□□ -0.06
PDLIM5-202ENST00000318007 GP1BAP07359 652 aa14.7□□□□□ -0.06
PDLIM5-202ENST00000318007 NCF2P19878 526 aaPredicted RBP14.7□□□□□ -0.06
PDLIM5-202ENST00000318007 INSM1Q01101 510 aaPredicted RBP14.7□□□□□ -0.06
PDLIM5-202ENST00000318007 AP5B1Q2VPB7 878 aa14.7□□□□□ -0.06
PDLIM5-202ENST00000318007 ATP6AP1LQ52LC2 224 aa14.7□□□□□ -0.06
PDLIM5-202ENST00000318007 RFTN2Q52LD8 501 aaPredicted RBP14.7□□□□□ -0.06
PDLIM5-202ENST00000318007 ASPGQ86U10 573 aa14.7□□□□□ -0.06
PDLIM5-202ENST00000318007 MCATQ8IVS2 390 aaKnown RBP14.7□□□□□ -0.06
PDLIM5-202ENST00000318007 TBC1D19Q8N5T2 526 aa14.7□□□□□ -0.06
PDLIM5-202ENST00000318007 MFSD9Q8NBP5 474 aa14.7□□□□□ -0.06
PDLIM5-202ENST00000318007 UBE2E3Q969T4 207 aa14.7□□□□□ -0.06
PDLIM5-202ENST00000318007 CATSPER2Q96P56 530 aa14.7□□□□□ -0.06
PDLIM5-202ENST00000318007 CD180Q99467 661 aa14.7□□□□□ -0.06
PDLIM5-202ENST00000318007 CTRCQ99895 268 aa14.7□□□□□ -0.06
PDLIM5-202ENST00000318007 REXO4Q9GZR2 422 aaKnown RBP14.7□□□□□ -0.06
PDLIM5-202ENST00000318007 MRPS2Q9Y399 296 aaKnown RBP14.7□□□□□ -0.06
PDLIM5-202ENST00000318007 SCN3AQ9NY46 2000 aa14.69□□□□□ -0.06
PDLIM5-202ENST00000318007 FAM149AA5PLN7 773 aa14.69□□□□□ -0.06
PDLIM5-202ENST00000318007 LSM1O15116 133 aaKnown RBP14.69□□□□□ -0.06
PDLIM5-202ENST00000318007 MAP3K7O43318 606 aa14.69□□□□□ -0.06
PDLIM5-202ENST00000318007 RGS14O43566 566 aa14.69□□□□□ -0.06
PDLIM5-202ENST00000318007 SLC35G6P0C7Q6 338 aa14.69□□□□□ -0.06
PDLIM5-202ENST00000318007 HRH2P25021 359 aa14.69□□□□□ -0.06
PDLIM5-202ENST00000318007 NOVA1P51513 510 aaKnown RBP14.69□□□□□ -0.06
PDLIM5-202ENST00000318007 PCDH1Q08174 1060 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms