RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 ZNF547Q8IVP9 402 aa12.6□□□□□ -0.39
CPNE1-201ENST00000317677 AQP12AQ8IXF9 295 aa12.6□□□□□ -0.39
CPNE1-201ENST00000317677 CHPFQ8IZ52 775 aa12.6□□□□□ -0.39
CPNE1-201ENST00000317677 ELMOD2Q8IZ81 293 aa12.6□□□□□ -0.39
CPNE1-201ENST00000317677 RHOXF1Q8NHV9 184 aa12.6□□□□□ -0.39
CPNE1-201ENST00000317677 SKA2Q8WVK7 121 aaPredicted RBP12.6□□□□□ -0.39
CPNE1-201ENST00000317677 ASZ1Q8WWH4 475 aa12.6□□□□□ -0.39
CPNE1-201ENST00000317677 CCM2Q9BSQ5 444 aa12.6□□□□□ -0.39
CPNE1-201ENST00000317677 NTMT1Q9BV86 223 aa12.6□□□□□ -0.39
CPNE1-201ENST00000317677 PHF7Q9BWX1 381 aaPredicted RBP12.6□□□□□ -0.39
CPNE1-201ENST00000317677 SLC7A5P2Q9GIP4 190 aa12.6□□□□□ -0.39
CPNE1-201ENST00000317677 PCDHAC1Q9H158 963 aa12.6□□□□□ -0.39
CPNE1-201ENST00000317677 OR2AG1Q9H205 316 aa12.6□□□□□ -0.39
CPNE1-201ENST00000317677 SLA2Q9H6Q3 261 aa12.6□□□□□ -0.39
CPNE1-201ENST00000317677 DYRK4Q9NR20 520 aa12.6□□□□□ -0.39
CPNE1-201ENST00000317677 DIABLOQ9NR28 239 aa12.6□□□□□ -0.39
CPNE1-201ENST00000317677 SDR39U1Q9NRG7 319 aaPredicted RBP12.6□□□□□ -0.39
CPNE1-201ENST00000317677 FARSBQ9NSD9 589 aaKnown RBP12.6□□□□□ -0.39
CPNE1-201ENST00000317677 ZNF229Q9UJW7 825 aa12.6□□□□□ -0.39
CPNE1-201ENST00000317677 SAGE2PA6NJ88 616 aa12.6□□□□□ -0.39
CPNE1-201ENST00000317677 E7ENX8 843 aa12.6□□□□□ -0.39
CPNE1-201ENST00000317677 FFAR3O14843 346 aa12.6□□□□□ -0.39
CPNE1-201ENST00000317677 NPC1O15118 1278 aa12.6□□□□□ -0.39
CPNE1-201ENST00000317677 KPNA5O15131 536 aa12.6□□□□□ -0.39
CPNE1-201ENST00000317677 POLR1CO15160 346 aaPredicted RBP12.6□□□□□ -0.39
CPNE1-201ENST00000317677 GPR42O15529 346 aa12.6□□□□□ -0.39
CPNE1-201ENST00000317677 ATG13O75143 517 aa12.6□□□□□ -0.39
CPNE1-201ENST00000317677 PSIP1O75475 530 aaKnown RBP12.6□□□□□ -0.39
CPNE1-201ENST00000317677 TIPRLO75663 272 aa12.6□□□□□ -0.39
CPNE1-201ENST00000317677 PTTG1O95997 202 aa12.6□□□□□ -0.39
CPNE1-201ENST00000317677 SNRPB2P08579 225 aaKnown RBP12.6□□□□□ -0.39
CPNE1-201ENST00000317677 GSTM1P09488 218 aa12.6□□□□□ -0.39
CPNE1-201ENST00000317677 TCN1P20061 433 aaPredicted RBP12.6□□□□□ -0.39
CPNE1-201ENST00000317677 ENPP1P22413 925 aa12.6□□□□□ -0.39
CPNE1-201ENST00000317677 RRM2P31350 389 aa12.6□□□□□ -0.39
CPNE1-201ENST00000317677 TIE1P35590 1138 aa12.6□□□□□ -0.39
CPNE1-201ENST00000317677 MTHFRP42898 656 aa12.6□□□□□ -0.39
CPNE1-201ENST00000317677 ABRQ12979 859 aa12.6□□□□□ -0.39
CPNE1-201ENST00000317677 CTF1Q16619 201 aa12.6□□□□□ -0.39
CPNE1-201ENST00000317677 ZNF181Q2M3W8 571 aa12.6□□□□□ -0.39
CPNE1-201ENST00000317677 KIF19Q2TAC6 998 aa12.6□□□□□ -0.39
CPNE1-201ENST00000317677 BCL7AQ4VC05 210 aa12.6□□□□□ -0.39
CPNE1-201ENST00000317677 IER5LQ5T953 404 aa12.6□□□□□ -0.39
CPNE1-201ENST00000317677 UBE2UQ5VVX9 321 aa12.6□□□□□ -0.39
CPNE1-201ENST00000317677 METTL2BQ6P1Q9 378 aaKnown RBP12.6□□□□□ -0.39
CPNE1-201ENST00000317677 C8orf82Q6P1X6 216 aaPredicted RBP12.6□□□□□ -0.39
CPNE1-201ENST00000317677 IL27RAQ6UWB1 636 aa12.6□□□□□ -0.39
CPNE1-201ENST00000317677 EFL1Q7Z2Z2 1120 aaKnown RBP12.6□□□□□ -0.39
CPNE1-201ENST00000317677 RALGPS2Q86X27 583 aaPredicted RBP12.6□□□□□ -0.39
CPNE1-201ENST00000317677 DHFR2Q86XF0 187 aa12.6□□□□□ -0.39
CPNE1-201ENST00000317677 FAM156AQ8NDB6 213 aa12.6□□□□□ -0.39
CPNE1-201ENST00000317677 TOR1AIP2Q8NFQ8 470 aa12.6□□□□□ -0.39
CPNE1-201ENST00000317677 CXorf40AQ8TE69 158 aa12.6□□□□□ -0.39
CPNE1-201ENST00000317677 GLMNQ92990 594 aa12.6□□□□□ -0.39
CPNE1-201ENST00000317677 PYCR2Q96C36 320 aa12.6□□□□□ -0.39
CPNE1-201ENST00000317677 NECTIN4Q96NY8 510 aa12.6□□□□□ -0.39
CPNE1-201ENST00000317677 FUNDC2Q9BWH2 189 aa12.6□□□□□ -0.39
CPNE1-201ENST00000317677 EPHX3Q9H6B9 360 aa12.6□□□□□ -0.39
CPNE1-201ENST00000317677 SMPD3Q9NY59 655 aaPredicted RBP12.6□□□□□ -0.39
CPNE1-201ENST00000317677 GPSM3Q9Y4H4 160 aa12.6□□□□□ -0.39
CPNE1-201ENST00000317677 SPEF1Q9Y4P9 236 aa12.6□□□□□ -0.39
CPNE1-201ENST00000317677 KCNE1BA0A087WTH5 132 aa12.59□□□□□ -0.39
CPNE1-201ENST00000317677 MAN1A2O60476 641 aa12.59□□□□□ -0.39
CPNE1-201ENST00000317677 SYNCRIPO60506 623 aaKnown RBP12.59□□□□□ -0.39
CPNE1-201ENST00000317677 VPS4BO75351 444 aa12.59□□□□□ -0.39
CPNE1-201ENST00000317677 ZNF8P17098 575 aaPredicted RBP12.59□□□□□ -0.39
CPNE1-201ENST00000317677 ARL1P40616 181 aaPredicted RBP12.59□□□□□ -0.39
CPNE1-201ENST00000317677 BDKRB1P46663 353 aa12.59□□□□□ -0.39
CPNE1-201ENST00000317677 MRPL19P49406 292 aaKnown RBP12.59□□□□□ -0.39
CPNE1-201ENST00000317677 YBX1P67809 324 aaKnown RBP12.59□□□□□ -0.39
CPNE1-201ENST00000317677 GALK2Q01415 458 aa12.59□□□□□ -0.39
CPNE1-201ENST00000317677 KRR1Q13601 381 aaKnown RBP12.59□□□□□ -0.39
CPNE1-201ENST00000317677 FXNQ16595 210 aa12.59□□□□□ -0.39
CPNE1-201ENST00000317677 DGUOKQ16854 277 aa12.59□□□□□ -0.39
CPNE1-201ENST00000317677 PTCHD3Q3KNS1 767 aa12.59□□□□□ -0.39
CPNE1-201ENST00000317677 FKBP9P1Q75LS8 142 aa12.59□□□□□ -0.39
CPNE1-201ENST00000317677 SLCO6A1Q86UG4 719 aa12.59□□□□□ -0.39
CPNE1-201ENST00000317677 CCDC28AQ8IWP9 274 aa12.59□□□□□ -0.39
CPNE1-201ENST00000317677 CYGBQ8WWM9 190 aa12.59□□□□□ -0.39
CPNE1-201ENST00000317677 GIMAP1Q8WWP7 306 aa12.59□□□□□ -0.39
CPNE1-201ENST00000317677 RAB7BQ96AH8 199 aa12.59□□□□□ -0.39
CPNE1-201ENST00000317677 COX14Q96I36 57 aa12.59□□□□□ -0.39
CPNE1-201ENST00000317677 SLC6A17Q9H1V8 727 aa12.59□□□□□ -0.39
CPNE1-201ENST00000317677 SLC32A1Q9H598 525 aa12.59□□□□□ -0.39
CPNE1-201ENST00000317677 SPAG4Q9NPE6 437 aa12.59□□□□□ -0.39
CPNE1-201ENST00000317677 NECTIN3Q9NQS3 549 aa12.59□□□□□ -0.39
CPNE1-201ENST00000317677 TMEM181Q9P2C4 612 aa12.59□□□□□ -0.39
CPNE1-201ENST00000317677 TRPS1Q9UHF7 1281 aa12.59□□□□□ -0.39
CPNE1-201ENST00000317677 MAU2Q9Y6X3 613 aa12.59□□□□□ -0.39
CPNE1-201ENST00000317677 NUMA1Q14980 2115 aa12.58□□□□□ -0.39
CPNE1-201ENST00000317677 RNF103-CHMP3A0A140T963 221 aa12.58□□□□□ -0.4
CPNE1-201ENST00000317677 ASPDHA6ND91 283 aa12.58□□□□□ -0.4
CPNE1-201ENST00000317677 PRORSD1PA6NEY8 169 aa12.58□□□□□ -0.4
CPNE1-201ENST00000317677 IGLON5A6NGN9 336 aa12.58□□□□□ -0.4
CPNE1-201ENST00000317677 QSOX1O00391 747 aa12.58□□□□□ -0.4
CPNE1-201ENST00000317677 SHOXO15266 292 aa12.58□□□□□ -0.4
CPNE1-201ENST00000317677 NRP2O60462 931 aa12.58□□□□□ -0.4
CPNE1-201ENST00000317677 UPK1BO75841 260 aa12.58□□□□□ -0.4
CPNE1-201ENST00000317677 EPB42P16452 691 aa12.58□□□□□ -0.4
CPNE1-201ENST00000317677 COL9A1P20849 921 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms