RNA–Protein interactions for RNA: ENST00000311034.6

NPAS4-201, Transcript of neuronal PAS domain protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPAS4, Length 3,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4-201ENST00000311034 KLHL17Q6TDP4 642 aa13.11□□□□□ -0.31
NPAS4-201ENST00000311034 TUBA1AQ71U36 451 aa13.11□□□□□ -0.31
NPAS4-201ENST00000311034 DDX53Q86TM3 631 aaKnown RBP13.11□□□□□ -0.31
NPAS4-201ENST00000311034 OR9Q2Q8NGE9 314 aa13.11□□□□□ -0.31
NPAS4-201ENST00000311034 TMEM203Q969S6 136 aa13.11□□□□□ -0.31
NPAS4-201ENST00000311034 TMEM246Q9BRR3 403 aa13.11□□□□□ -0.31
NPAS4-201ENST00000311034 MMP28Q9H239 520 aa13.11□□□□□ -0.31
NPAS4-201ENST00000311034 MOV10Q9HCE1 1003 aaKnown RBP13.11□□□□□ -0.31
NPAS4-201ENST00000311034 SNTG1Q9NSN8 517 aa13.11□□□□□ -0.31
NPAS4-201ENST00000311034 EFCAB10A6NFE3 127 aa13.1□□□□□ -0.31
NPAS4-201ENST00000311034 DRGXA6NNA5 263 aa13.1□□□□□ -0.31
NPAS4-201ENST00000311034 GFRA2O00451 464 aa13.1□□□□□ -0.31
NPAS4-201ENST00000311034 PTTG1O95997 202 aa13.1□□□□□ -0.31
NPAS4-201ENST00000311034 KLKB1P03952 638 aa13.1□□□□□ -0.31
NPAS4-201ENST00000311034 CKMT1AP12532 417 aa13.1□□□□□ -0.31
NPAS4-201ENST00000311034 ACPPP15309 386 aa13.1□□□□□ -0.31
NPAS4-201ENST00000311034 MRPL19P49406 292 aaKnown RBP13.1□□□□□ -0.31
NPAS4-201ENST00000311034 CSTF3Q12996 717 aaKnown RBP13.1□□□□□ -0.31
NPAS4-201ENST00000311034 SERPINA13PQ6UXR4 307 aa13.1□□□□□ -0.31
NPAS4-201ENST00000311034 UBE2R2Q712K3 238 aaPredicted RBP13.1□□□□□ -0.31
NPAS4-201ENST00000311034 GALNT12Q8IXK2 581 aa13.1□□□□□ -0.31
NPAS4-201ENST00000311034 APCDD1Q8J025 514 aa13.1□□□□□ -0.31
NPAS4-201ENST00000311034 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.1□□□□□ -0.31
NPAS4-201ENST00000311034 LILRB4Q8NHJ6 448 aa13.1□□□□□ -0.31
NPAS4-201ENST00000311034 DOK4Q8TEW6 326 aa13.1□□□□□ -0.31
NPAS4-201ENST00000311034 OR5M11Q96RB7 305 aa13.1□□□□□ -0.31
NPAS4-201ENST00000311034 CITED4Q96RK1 184 aa13.1□□□□□ -0.31
NPAS4-201ENST00000311034 BCL7BQ9BQE9 202 aa13.1□□□□□ -0.31
NPAS4-201ENST00000311034 ACSL6Q9UKU0 697 aa13.1□□□□□ -0.31
NPAS4-201ENST00000311034 SLC6A14Q9UN76 642 aa13.1□□□□□ -0.31
NPAS4-201ENST00000311034 RFXAPO00287 272 aa13.1□□□□□ -0.31
NPAS4-201ENST00000311034 PREPP48147 710 aa13.1□□□□□ -0.31
NPAS4-201ENST00000311034 RFX3P48380 749 aa13.1□□□□□ -0.31
NPAS4-201ENST00000311034 CLDN8P56748 225 aa13.1□□□□□ -0.31
NPAS4-201ENST00000311034 NAE1Q13564 534 aa13.1□□□□□ -0.31
NPAS4-201ENST00000311034 TBRG1Q3YBR2 411 aa13.1□□□□□ -0.31
NPAS4-201ENST00000311034 XKR6Q5GH73 641 aa13.1□□□□□ -0.31
NPAS4-201ENST00000311034 ZMAT1Q5H9K5 638 aa13.1□□□□□ -0.31
NPAS4-201ENST00000311034 CLLU1OSQ5K130 101 aa13.1□□□□□ -0.31
NPAS4-201ENST00000311034 LRRC66Q68CR7 880 aa13.1□□□□□ -0.31
NPAS4-201ENST00000311034 TRIM48Q8IWZ4 208 aa13.1□□□□□ -0.31
NPAS4-201ENST00000311034 RBFAQ8N0V3 343 aa13.1□□□□□ -0.31
NPAS4-201ENST00000311034 OR10G2Q8NGC3 310 aa13.1□□□□□ -0.31
NPAS4-201ENST00000311034 EID2BQ96D98 161 aa13.1□□□□□ -0.31
NPAS4-201ENST00000311034 FZD4Q9ULV1 537 aa13.1□□□□□ -0.31
NPAS4-201ENST00000311034 PCDHB8Q9UN66 801 aa13.1□□□□□ -0.31
NPAS4-201ENST00000311034 OARD1Q9Y530 152 aa13.1□□□□□ -0.31
NPAS4-201ENST00000311034 BRWD1Q9NSI6 2320 aa13.1□□□□□ -0.31
NPAS4-201ENST00000311034 EBLN1P0CF75 366 aa13.1□□□□□ -0.31
NPAS4-201ENST00000311034 ADORA3P0DMS8 318 aa13.1□□□□□ -0.31
NPAS4-201ENST00000311034 NKX3-2P78367 333 aa13.1□□□□□ -0.31
NPAS4-201ENST00000311034 CD83Q01151 205 aa13.1□□□□□ -0.31
NPAS4-201ENST00000311034 HKDC1Q2TB90 917 aa13.1□□□□□ -0.31
NPAS4-201ENST00000311034 AGAP6Q5VW22 663 aa13.1□□□□□ -0.31
NPAS4-201ENST00000311034 FUT10Q6P4F1 479 aa13.1□□□□□ -0.31
NPAS4-201ENST00000311034 CMTM8Q8IZV2 173 aa13.1□□□□□ -0.31
NPAS4-201ENST00000311034 AGAP4Q96P64 663 aa13.1□□□□□ -0.31
NPAS4-201ENST00000311034 ZNF556Q9HAH1 456 aa13.1□□□□□ -0.31
NPAS4-201ENST00000311034 PEX16Q9Y5Y5 336 aa13.1□□□□□ -0.31
NPAS4-201ENST00000311034 COCHO43405 550 aa13.09□□□□□ -0.31
NPAS4-201ENST00000311034 NME6O75414 186 aaPredicted RBP13.09□□□□□ -0.31
NPAS4-201ENST00000311034 FEN1P39748 380 aaKnown RBP13.09□□□□□ -0.31
NPAS4-201ENST00000311034 CXCR4P61073 352 aa13.09□□□□□ -0.31
NPAS4-201ENST00000311034 CDC20Q12834 499 aa13.09□□□□□ -0.31
NPAS4-201ENST00000311034 CALHM3Q86XJ0 350 aa13.09□□□□□ -0.31
NPAS4-201ENST00000311034 ZZZ3Q8IYH5 903 aa13.09□□□□□ -0.31
NPAS4-201ENST00000311034 ASCC1Q8N9N2 400 aaKnown RBP13.09□□□□□ -0.31
NPAS4-201ENST00000311034 ARMC5Q96C12 935 aa13.09□□□□□ -0.31
NPAS4-201ENST00000311034 TCF25Q9BQ70 676 aa13.09□□□□□ -0.31
NPAS4-201ENST00000311034 TPT1P8Q9HAU6 139 aa13.09□□□□□ -0.31
NPAS4-201ENST00000311034 TMEM184CQ9NVA4 438 aa13.09□□□□□ -0.31
NPAS4-201ENST00000311034 RAB23Q9ULC3 237 aa13.09□□□□□ -0.31
NPAS4-201ENST00000311034 MTMR11A4FU01 709 aa13.09□□□□□ -0.31
NPAS4-201ENST00000311034 MGAT4DA6NG13 374 aa13.09□□□□□ -0.31
NPAS4-201ENST00000311034 UNCXA6NJT0 531 aa13.09□□□□□ -0.31
NPAS4-201ENST00000311034 H3BN98 237 aa13.09□□□□□ -0.31
NPAS4-201ENST00000311034 KCNK5O95279 499 aa13.09□□□□□ -0.31
NPAS4-201ENST00000311034 EIF2S1P05198 315 aaKnown RBP13.09□□□□□ -0.31
NPAS4-201ENST00000311034 FHP07954 510 aa13.09□□□□□ -0.31
NPAS4-201ENST00000311034 ALPPL2P10696 532 aa13.09□□□□□ -0.31
NPAS4-201ENST00000311034 CLCN4P51793 760 aa13.09□□□□□ -0.31
NPAS4-201ENST00000311034 ZNF45Q02386 682 aa13.09□□□□□ -0.31
NPAS4-201ENST00000311034 CHIT1Q13231 466 aa13.09□□□□□ -0.31
NPAS4-201ENST00000311034 DSC3Q14574 896 aa13.09□□□□□ -0.31
NPAS4-201ENST00000311034 PTCHD3Q3KNS1 767 aa13.09□□□□□ -0.31
NPAS4-201ENST00000311034 ZNF544Q6NX49 715 aa13.09□□□□□ -0.31
NPAS4-201ENST00000311034 ZNF517Q6ZMY9 492 aaPredicted RBP13.09□□□□□ -0.31
NPAS4-201ENST00000311034 RTN4RL1Q86UN2 441 aaPredicted RBP13.09□□□□□ -0.31
NPAS4-201ENST00000311034 LGI4Q8N135 537 aa13.09□□□□□ -0.31
NPAS4-201ENST00000311034 SIX5Q8N196 739 aa13.09□□□□□ -0.31
NPAS4-201ENST00000311034 GTF3C2Q8WUA4 911 aaPredicted RBP13.09□□□□□ -0.31
NPAS4-201ENST00000311034 NECTIN4Q96NY8 510 aa13.09□□□□□ -0.31
NPAS4-201ENST00000311034 CCM2Q9BSQ5 444 aa13.09□□□□□ -0.31
NPAS4-201ENST00000311034 C11orf16Q9NQ32 467 aa13.09□□□□□ -0.31
NPAS4-201ENST00000311034 TAS2R9Q9NYW1 312 aa13.09□□□□□ -0.31
NPAS4-201ENST00000311034 IL17CQ9P0M4 197 aa13.09□□□□□ -0.31
NPAS4-201ENST00000311034 MALT1Q9UDY8 824 aa13.09□□□□□ -0.31
NPAS4-201ENST00000311034 PCDHB1Q9Y5F3 818 aa13.09□□□□□ -0.31
NPAS4-201ENST00000311034 MYO16Q9Y6X6 1858 aa13.08□□□□□ -0.31
NPAS4-201ENST00000311034 J3KTA2 159 aa13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms