RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 CDC14AQ9UNH5 594 aa17.09■□□□□ 0.33
SSSCA1-201ENST00000309328 LOC105369274A0A096LPK9 316 aa17.08■□□□□ 0.32
SSSCA1-201ENST00000309328 LOC102723532A0A0G2JNH3 316 aa17.08■□□□□ 0.32
SSSCA1-201ENST00000309328 A0A1B0GX78 115 aa17.08■□□□□ 0.32
SSSCA1-201ENST00000309328 FEZF1A0PJY2 475 aa17.08■□□□□ 0.32
SSSCA1-201ENST00000309328 HYKKA2RU49 373 aa17.08■□□□□ 0.32
SSSCA1-201ENST00000309328 PMS2P1A4D2B8 440 aa17.08■□□□□ 0.32
SSSCA1-201ENST00000309328 OR7A17O14581 309 aa17.08■□□□□ 0.32
SSSCA1-201ENST00000309328 NPHS1O60500 1241 aa17.08■□□□□ 0.32
SSSCA1-201ENST00000309328 KIAA0754O94854 1291 aa17.08■□□□□ 0.32
SSSCA1-201ENST00000309328 DLGAP3O95886 979 aa17.08■□□□□ 0.32
SSSCA1-201ENST00000309328 ENO1P06733 434 aaKnown RBP17.08■□□□□ 0.32
SSSCA1-201ENST00000309328 DHRS4L1P0CG22 281 aa17.08■□□□□ 0.32
SSSCA1-201ENST00000309328 AGXTP21549 392 aa17.08■□□□□ 0.32
SSSCA1-201ENST00000309328 STXBP1P61764 594 aaKnown RBP17.08■□□□□ 0.32
SSSCA1-201ENST00000309328 MEF2AQ02078 507 aaPredicted RBP17.08■□□□□ 0.32
SSSCA1-201ENST00000309328 TGM3Q08188 693 aa17.08■□□□□ 0.32
SSSCA1-201ENST00000309328 HERC3Q15034 1050 aa17.08■□□□□ 0.32
SSSCA1-201ENST00000309328 HHATQ5VTY9 493 aa17.08■□□□□ 0.32
SSSCA1-201ENST00000309328 C6orf15Q6UXA7 325 aaPredicted RBP17.08■□□□□ 0.32
SSSCA1-201ENST00000309328 UNQ6494/PRO21346Q6UXR6 183 aa17.08■□□□□ 0.32
SSSCA1-201ENST00000309328 GPRIN3Q6ZVF9 776 aa17.08■□□□□ 0.32
SSSCA1-201ENST00000309328 ABHD13Q7L211 337 aa17.08■□□□□ 0.32
SSSCA1-201ENST00000309328 VN1R4Q7Z5H5 301 aa17.08■□□□□ 0.32
SSSCA1-201ENST00000309328 MYLK4Q86YV6 388 aaPredicted RBP17.08■□□□□ 0.32
SSSCA1-201ENST00000309328 PLD3Q8IV08 490 aa17.08■□□□□ 0.32
SSSCA1-201ENST00000309328 NUDCD3Q8IVD9 361 aa17.08■□□□□ 0.32
SSSCA1-201ENST00000309328 NLGN4XQ8N0W4 816 aa17.08■□□□□ 0.32
SSSCA1-201ENST00000309328 OR4N4Q8N0Y3 316 aa17.08■□□□□ 0.32
SSSCA1-201ENST00000309328 SRFBP1Q8NEF9 429 aaKnown RBP17.08■□□□□ 0.32
SSSCA1-201ENST00000309328 NLGN4YQ8NFZ3 816 aaPredicted RBP17.08■□□□□ 0.32
SSSCA1-201ENST00000309328 CLIP3Q96DZ5 547 aa17.08■□□□□ 0.32
SSSCA1-201ENST00000309328 CENPKQ9BS16 269 aa17.08■□□□□ 0.32
SSSCA1-201ENST00000309328 EFHD1Q9BUP0 239 aa17.08■□□□□ 0.32
SSSCA1-201ENST00000309328 SLC29A3Q9BZD2 475 aa17.08■□□□□ 0.32
SSSCA1-201ENST00000309328 SPRY4Q9C004 299 aa17.08■□□□□ 0.32
SSSCA1-201ENST00000309328 SPRTNQ9H040 489 aaPredicted RBP17.08■□□□□ 0.32
SSSCA1-201ENST00000309328 EML4Q9HC35 981 aaKnown RBP17.08■□□□□ 0.32
SSSCA1-201ENST00000309328 ZBTB26Q9HCK0 441 aa17.08■□□□□ 0.32
SSSCA1-201ENST00000309328 MED4Q9NPJ6 270 aa17.08■□□□□ 0.32
SSSCA1-201ENST00000309328 CUTCQ9NTM9 273 aa17.08■□□□□ 0.32
SSSCA1-201ENST00000309328 PSD3Q9NYI0 1048 aa17.08■□□□□ 0.32
SSSCA1-201ENST00000309328 FOXJ2Q9P0K8 574 aa17.08■□□□□ 0.32
SSSCA1-201ENST00000309328 TRPS1Q9UHF7 1281 aa17.08■□□□□ 0.32
SSSCA1-201ENST00000309328 PADI1Q9ULC6 663 aa17.08■□□□□ 0.32
SSSCA1-201ENST00000309328 PPT2Q9UMR5 302 aa17.08■□□□□ 0.32
SSSCA1-201ENST00000309328 SNX6Q9UNH7 406 aa17.08■□□□□ 0.32
SSSCA1-201ENST00000309328 SLC22A7Q9Y694 548 aa17.08■□□□□ 0.32
SSSCA1-201ENST00000309328 A0A088AWK7 358 aa17.07■□□□□ 0.32
SSSCA1-201ENST00000309328 LRRC14BA6NHZ5 514 aa17.07■□□□□ 0.32
SSSCA1-201ENST00000309328 DSCR3O14972 297 aa17.07■□□□□ 0.32
SSSCA1-201ENST00000309328 NDUFS4O43181 175 aa17.07■□□□□ 0.32
SSSCA1-201ENST00000309328 HCRTR1O43613 425 aa17.07■□□□□ 0.32
SSSCA1-201ENST00000309328 LCMT2O60294 686 aaKnown RBP17.07■□□□□ 0.32
SSSCA1-201ENST00000309328 NRP2O60462 931 aa17.07■□□□□ 0.32
SSSCA1-201ENST00000309328 SASH3O75995 380 aa17.07■□□□□ 0.32
SSSCA1-201ENST00000309328 ESRRBO95718 433 aa17.07■□□□□ 0.32
SSSCA1-201ENST00000309328 ZNF10P21506 573 aaPredicted RBP17.07■□□□□ 0.32
SSSCA1-201ENST00000309328 GRK2P25098 689 aa17.07■□□□□ 0.32
SSSCA1-201ENST00000309328 ALDH3A1P30838 453 aa17.07■□□□□ 0.32
SSSCA1-201ENST00000309328 GCGRP47871 477 aa17.07■□□□□ 0.32
SSSCA1-201ENST00000309328 ARFIP1P53367 373 aa17.07■□□□□ 0.32
SSSCA1-201ENST00000309328 ABHD18Q0P651 414 aa17.07■□□□□ 0.32
SSSCA1-201ENST00000309328 IFT88Q13099 833 aa17.07■□□□□ 0.32
SSSCA1-201ENST00000309328 TRAF3Q13114 568 aa17.07■□□□□ 0.32
SSSCA1-201ENST00000309328 TRIM42Q8IWZ5 723 aa17.07■□□□□ 0.32
SSSCA1-201ENST00000309328 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.07■□□□□ 0.32
SSSCA1-201ENST00000309328 OR7G3Q8NG95 312 aa17.07■□□□□ 0.32
SSSCA1-201ENST00000309328 OR52B6Q8NGF0 335 aa17.07■□□□□ 0.32
SSSCA1-201ENST00000309328 PPP1R14CQ8TAE6 165 aa17.07■□□□□ 0.32
SSSCA1-201ENST00000309328 TRPC4APQ8TEL6 797 aa17.07■□□□□ 0.32
SSSCA1-201ENST00000309328 ARL8AQ96BM9 186 aa17.07■□□□□ 0.32
SSSCA1-201ENST00000309328 NSUN5Q96P11 429 aaKnown RBP17.07■□□□□ 0.32
SSSCA1-201ENST00000309328 TMEM121BQ9BXQ6 578 aaPredicted RBP17.07■□□□□ 0.32
SSSCA1-201ENST00000309328 DPH1Q9BZG8 443 aa17.07■□□□□ 0.32
SSSCA1-201ENST00000309328 CLK4Q9HAZ1 481 aaKnown RBP17.07■□□□□ 0.32
SSSCA1-201ENST00000309328 ANKRD12Q6UB98 2062 aa17.07■□□□□ 0.32
SSSCA1-201ENST00000309328 PCM1Q15154 2024 aa17.06■□□□□ 0.32
SSSCA1-201ENST00000309328 MEN1O00255 615 aa17.06■□□□□ 0.32
SSSCA1-201ENST00000309328 FOXE1O00358 373 aaPredicted RBP17.06■□□□□ 0.32
SSSCA1-201ENST00000309328 KRT6AP02538 564 aa17.06■□□□□ 0.32
SSSCA1-201ENST00000309328 KRT6BP04259 564 aa17.06■□□□□ 0.32
SSSCA1-201ENST00000309328 RORAP35398 523 aa17.06■□□□□ 0.32
SSSCA1-201ENST00000309328 KRT6CP48668 564 aa17.06■□□□□ 0.32
SSSCA1-201ENST00000309328 CDH13P55290 713 aa17.06■□□□□ 0.32
SSSCA1-201ENST00000309328 TMEM35AQ53FP2 167 aa17.06■□□□□ 0.32
SSSCA1-201ENST00000309328 FRG2Q64ET8 278 aa17.06■□□□□ 0.32
SSSCA1-201ENST00000309328 TMEM214Q6NUQ4 689 aaKnown RBP17.06■□□□□ 0.32
SSSCA1-201ENST00000309328 DTX1Q86Y01 620 aa17.06■□□□□ 0.32
SSSCA1-201ENST00000309328 DSELQ8IZU8 1212 aa17.06■□□□□ 0.32
SSSCA1-201ENST00000309328 ANKRD53Q8N9V6 530 aa17.06■□□□□ 0.32
SSSCA1-201ENST00000309328 ZNF740Q8NDX6 193 aa17.06■□□□□ 0.32
SSSCA1-201ENST00000309328 RAB3IL1Q8TBN0 382 aa17.06■□□□□ 0.32
SSSCA1-201ENST00000309328 PMEPA1Q969W9 287 aa17.06■□□□□ 0.32
SSSCA1-201ENST00000309328 FRG2BQ96QU4 278 aa17.06■□□□□ 0.32
SSSCA1-201ENST00000309328 SPNS1Q9H2V7 528 aa17.06■□□□□ 0.32
SSSCA1-201ENST00000309328 C12orf65Q9H3J6 166 aaKnown RBP17.06■□□□□ 0.32
SSSCA1-201ENST00000309328 GSTO2Q9H4Y5 243 aa17.06■□□□□ 0.32
SSSCA1-201ENST00000309328 ELOVL6Q9H5J4 265 aa17.06■□□□□ 0.32
SSSCA1-201ENST00000309328 ZNF446Q9NWS9 450 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms