RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 CDC7O00311 574 aa13.03□□□□□ -0.32
TRIM56-201ENST00000306085 HCRTR2O43614 444 aa13.03□□□□□ -0.32
TRIM56-201ENST00000306085 H1F0P07305 194 aaKnown RBP13.03□□□□□ -0.32
TRIM56-201ENST00000306085 ERVK-25P63136 954 aa13.03□□□□□ -0.32
TRIM56-201ENST00000306085 ZBED5Q49AG3 693 aa13.03□□□□□ -0.32
TRIM56-201ENST00000306085 SKA3Q8IX90 412 aa13.03□□□□□ -0.32
TRIM56-201ENST00000306085 HAS2Q92819 552 aa13.03□□□□□ -0.32
TRIM56-201ENST00000306085 UROC1Q96N76 676 aa13.03□□□□□ -0.32
TRIM56-201ENST00000306085 CD180Q99467 661 aa13.03□□□□□ -0.32
TRIM56-201ENST00000306085 NCANO14594 1321 aa13.03□□□□□ -0.32
TRIM56-201ENST00000306085 PDHXO00330 501 aa13.03□□□□□ -0.32
TRIM56-201ENST00000306085 HOXC8P31273 242 aa13.03□□□□□ -0.32
TRIM56-201ENST00000306085 RAB30Q15771 203 aa13.03□□□□□ -0.32
TRIM56-201ENST00000306085 DPYSL2Q16555 572 aa13.03□□□□□ -0.32
TRIM56-201ENST00000306085 LRRC73Q5JTD7 316 aa13.03□□□□□ -0.32
TRIM56-201ENST00000306085 NSMAFQ92636 917 aa13.03□□□□□ -0.32
TRIM56-201ENST00000306085 C17orf62Q9BQA9 187 aa13.03□□□□□ -0.32
TRIM56-201ENST00000306085 C1orf21Q9H246 121 aa13.03□□□□□ -0.32
TRIM56-201ENST00000306085 LOC100130705A0A1B0GUX0 176 aa13.03□□□□□ -0.32
TRIM56-201ENST00000306085 NPIPA7E9PJI5 369 aa13.03□□□□□ -0.32
TRIM56-201ENST00000306085 MT-ND5P03915 603 aa13.03□□□□□ -0.32
TRIM56-201ENST00000306085 NPIPA8P0DM63 369 aa13.03□□□□□ -0.32
TRIM56-201ENST00000306085 PRDX6P30041 224 aa13.03□□□□□ -0.32
TRIM56-201ENST00000306085 DRAXINQ8NBI3 349 aaPredicted RBP13.03□□□□□ -0.32
TRIM56-201ENST00000306085 PROKR1Q8TCW9 393 aa13.03□□□□□ -0.32
TRIM56-201ENST00000306085 TMEM109Q9BVC6 243 aa13.03□□□□□ -0.32
TRIM56-201ENST00000306085 CPS1P31327 1500 aa13.03□□□□□ -0.32
TRIM56-201ENST00000306085 TLR5O60602 858 aa13.03□□□□□ -0.32
TRIM56-201ENST00000306085 RPS12P25398 132 aaKnown RBP13.03□□□□□ -0.32
TRIM56-201ENST00000306085 WDR6Q9NNW5 1121 aaKnown RBP13.03□□□□□ -0.32
TRIM56-201ENST00000306085 ZNF8P17098 575 aaPredicted RBP13.03□□□□□ -0.32
TRIM56-201ENST00000306085 EPHA1P21709 976 aa13.03□□□□□ -0.32
TRIM56-201ENST00000306085 AKAP6Q13023 2319 aa13.03□□□□□ -0.32
TRIM56-201ENST00000306085 FRMPD4Q14CM0 1322 aa13.02□□□□□ -0.32
TRIM56-201ENST00000306085 NT5C1B-RDH14C9J2C7 533 aa13.02□□□□□ -0.32
TRIM56-201ENST00000306085 SRPRAP08240 638 aaKnown RBP13.02□□□□□ -0.32
TRIM56-201ENST00000306085 ATPAF1Q5TC12 328 aaPredicted RBP13.02□□□□□ -0.32
TRIM56-201ENST00000306085 SLC51AQ86UW1 340 aa13.02□□□□□ -0.32
TRIM56-201ENST00000306085 ZNF283Q8N7M2 679 aa13.02□□□□□ -0.32
TRIM56-201ENST00000306085 ZDHHC1Q8WTX9 485 aa13.02□□□□□ -0.32
TRIM56-201ENST00000306085 CHD5Q8TDI0 1954 aa13.02□□□□□ -0.32
TRIM56-201ENST00000306085 RIC1Q4ADV7 1423 aa13.02□□□□□ -0.32
TRIM56-201ENST00000306085 A0A1W2PQH9 124 aa13.02□□□□□ -0.32
TRIM56-201ENST00000306085 C5orf60A6NFR6 353 aa13.02□□□□□ -0.32
TRIM56-201ENST00000306085 SGCEO43556 437 aa13.02□□□□□ -0.32
TRIM56-201ENST00000306085 TFPTP0C1Z6 253 aa13.02□□□□□ -0.32
TRIM56-201ENST00000306085 CDK2P24941 298 aa13.02□□□□□ -0.32
TRIM56-201ENST00000306085 PRKCZQ05513 592 aa13.02□□□□□ -0.32
TRIM56-201ENST00000306085 PTF1AQ7RTS3 328 aa13.02□□□□□ -0.32
TRIM56-201ENST00000306085 PDZD9Q8IXQ8 264 aa13.02□□□□□ -0.32
TRIM56-201ENST00000306085 SLC13A3Q8WWT9 602 aa13.02□□□□□ -0.32
TRIM56-201ENST00000306085 TMEM80Q96HE8 168 aa13.02□□□□□ -0.32
TRIM56-201ENST00000306085 SLC7A11Q9UPY5 501 aa13.02□□□□□ -0.32
TRIM56-201ENST00000306085 GOSR2O14653 212 aa13.02□□□□□ -0.32
TRIM56-201ENST00000306085 NADK2Q4G0N4 442 aa13.02□□□□□ -0.32
TRIM56-201ENST00000306085 SH3PXD2AQ5TCZ1 1133 aa13.02□□□□□ -0.32
TRIM56-201ENST00000306085 ERN2Q76MJ5 926 aaKnown RBP13.02□□□□□ -0.32
TRIM56-201ENST00000306085 SLC43A2Q8N370 569 aa13.02□□□□□ -0.32
TRIM56-201ENST00000306085 EPS8L1Q8TE68 723 aa13.02□□□□□ -0.32
TRIM56-201ENST00000306085 CHPT1Q8WUD6 406 aa13.02□□□□□ -0.32
TRIM56-201ENST00000306085 COL21A1Q96P44 957 aa13.02□□□□□ -0.32
TRIM56-201ENST00000306085 CCL22O00626 93 aa13.02□□□□□ -0.33
TRIM56-201ENST00000306085 BDKRB2P30411 391 aa13.02□□□□□ -0.33
TRIM56-201ENST00000306085 SPOCK2Q92563 424 aa13.02□□□□□ -0.33
TRIM56-201ENST00000306085 GBA3Q9H227 469 aa13.02□□□□□ -0.33
TRIM56-201ENST00000306085 PCDHGA11Q9Y5H2 935 aa13.02□□□□□ -0.33
TRIM56-201ENST00000306085 ARHGEF17Q96PE2 2063 aaPredicted RBP13.02□□□□□ -0.33
TRIM56-201ENST00000306085 OR4F21O95013 312 aa13.02□□□□□ -0.33
TRIM56-201ENST00000306085 HACD2Q6Y1H2 254 aa13.02□□□□□ -0.33
TRIM56-201ENST00000306085 Q8N402 240 aa13.02□□□□□ -0.33
TRIM56-201ENST00000306085 MAPKAP1Q9BPZ7 522 aa13.02□□□□□ -0.33
TRIM56-201ENST00000306085 C14orf119Q9NWQ9 140 aa13.02□□□□□ -0.33
TRIM56-201ENST00000306085 ZNF446Q9NWS9 450 aa13.02□□□□□ -0.33
TRIM56-201ENST00000306085 MS4A12Q9NXJ0 267 aa13.02□□□□□ -0.33
TRIM56-201ENST00000306085 CA5BQ9Y2D0 317 aa13.02□□□□□ -0.33
TRIM56-201ENST00000306085 LRRC7Q96NW7 1537 aa13.02□□□□□ -0.33
TRIM56-201ENST00000306085 TLX2O43763 284 aaPredicted RBP13.02□□□□□ -0.33
TRIM56-201ENST00000306085 MRPS6P82932 125 aaKnown RBP13.02□□□□□ -0.33
TRIM56-201ENST00000306085 ISCA1Q9BUE6 129 aa13.02□□□□□ -0.33
TRIM56-201ENST00000306085 BCHEP06276 602 aa13.02□□□□□ -0.33
TRIM56-201ENST00000306085 TGFB2P61812 414 aa13.02□□□□□ -0.33
TRIM56-201ENST00000306085 ITPK1Q13572 414 aa13.02□□□□□ -0.33
TRIM56-201ENST00000306085 PDGFRLQ15198 375 aa13.02□□□□□ -0.33
TRIM56-201ENST00000306085 C22orf15Q8WYQ4 148 aa13.02□□□□□ -0.33
TRIM56-201ENST00000306085 ERVW-1Q9UQF0 538 aa13.02□□□□□ -0.33
TRIM56-201ENST00000306085 FOXO6A8MYZ6 492 aa13.02□□□□□ -0.33
TRIM56-201ENST00000306085 PAK4O96013 591 aaPredicted RBP13.02□□□□□ -0.33
TRIM56-201ENST00000306085 C2P06681 752 aa13.02□□□□□ -0.33
TRIM56-201ENST00000306085 SNTA1Q13424 505 aa13.02□□□□□ -0.33
TRIM56-201ENST00000306085 OR6N1Q8NGY5 312 aa13.02□□□□□ -0.33
TRIM56-201ENST00000306085 SLC44A1Q8WWI5 657 aa13.02□□□□□ -0.33
TRIM56-201ENST00000306085 TP63Q9H3D4 680 aaPredicted RBP13.02□□□□□ -0.33
TRIM56-201ENST00000306085 A0A1W2PPK0 400 aa13.01□□□□□ -0.33
TRIM56-201ENST00000306085 CREBL2O60519 120 aaPredicted RBP13.01□□□□□ -0.33
TRIM56-201ENST00000306085 RCBTB2O95199 551 aa13.01□□□□□ -0.33
TRIM56-201ENST00000306085 MGST1P10620 155 aaKnown RBP13.01□□□□□ -0.33
TRIM56-201ENST00000306085 RNF208Q9H0X6 261 aa13.01□□□□□ -0.33
TRIM56-201ENST00000306085 MTG2Q9H4K7 406 aa13.01□□□□□ -0.33
TRIM56-201ENST00000306085 HLA-DPB1P04440 258 aa13.01□□□□□ -0.33
TRIM56-201ENST00000306085 GSTM3P21266 225 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms